CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
extracellular 1
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG90839	Soybean	mitochondrion, nucleus	74.87	91.08
KRH41646	Soybean	nucleus	21.47	29.29
KRH48492	Soybean	plastid	34.55	26.72
KRH39177	Soybean	plastid	31.94	25.1

Protein Annotations

EMBL:ACUP02006712	EnsemblPlants:KRH35939	EnsemblPlantsGene:GLYMA_10G273300	EntrezGene:102663683	InterPro:VQ	PANTHER:PTHR33143
PANTHER:PTHR33143:SF11	PFAM:PF05678	ProteinID:KRH35939	ProteinID:KRH35939.1	SEG:seg	UniParc:UPI00023CE214
UniProt:K7LLR8	MapMan:35.2	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:49575568..49576678

Molecular Weight (calculated)

20982.7 Da

IEP (calculated)

8.422

GRAVY (calculated)

-0.545

Length

191 amino acids

Sequence
(BLAST)

001: MKAGAKLYGF HEQQPKKVIN GPRPSPLMIN KDSHMIRKET KLQRPQRINP IIIYTESPKI IHTKAKDFMA LVQRLTGRSS STNDNLSTAS LPQEGSENFG
101: SSLSDGSNYN SNETSSALRR VGENLVESGA IVQHGPSNLD FADMPLFTPN SSDFFCSSGS SVYKYSDSPY GVLGSLISPS GLEFMKELPE Y

Best Arabidopsis Sequence Match ( AT1G68450.1 )
(BLAST)

001: MIPTRCNEIN GSRPSSLKLA GESHTIKKTS SCKSKPRPHG RASPVIIYAH SPKVIHTRAE DFMALVQRLT GLDEIIRRNT SESSSSVVTE EVNVGDDNTA
101: APFSQDRTQR QKLTDMPLFT PSSMTLFGSP TQLMYMSPNR TDSFRPLVFK SE

Arabidopsis Description

VQ8VQ motif-containing protein 8, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9CA36]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.