CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
peroxisome 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH42483
KRH58580

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G21960.1	KRH42483	AT2G01950.1	19000166
AT4G21960.1	KRH58580	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH02070	Soybean	extracellular	69.78	38.37
KRH51085	Soybean	endoplasmic reticulum	69.78	37.8
Bra013576.1-P	Field mustard	extracellular	64.84	35.65
CDX79113	Canola	extracellular	64.84	35.65
CDX82887	Canola	extracellular	64.84	35.65
AT4G21960.1	Thale cress	extracellular	63.74	35.15
KRH32430	Soybean	extracellular	50.0	27.83
KRH19837	Soybean	extracellular	49.45	27.36
KRH51132	Soybean	extracellular	27.47	15.29
KRH02028	Soybean	extracellular	28.02	14.41

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	MapMan:35.1	EMBL:ACUP02002233	EnsemblPlantsGene:GLYMA_04G099500
GO:GO:0003674	GO:GO:0003824	GO:GO:0004601	GO:GO:0005488	GO:GO:0005575	GO:GO:0005618
GO:GO:0005623	GO:GO:0006950	GO:GO:0006979	GO:GO:0008150	GO:GO:0008152	GO:GO:0009505
GO:GO:0009506	GO:GO:0009664	GO:GO:0009987	GO:GO:0016043	GO:GO:0020037	GO:GO:0030312
GO:GO:0055114	GO:GO:0098869	InterPro:Haem_peroxidase	InterPro:Haem_peroxidase_pln/fun/bac	InterPro:IPR002016	UniProt:K7KJ86
EnsemblPlants:KRH62311	ProteinID:KRH62311	ProteinID:KRH62311.1	PFAM:PF00141	PRINTS:PR00461	PFscan:PS50873
PANTHER:PTHR31235	PANTHER:PTHR31235:SF69	MetaCyc:PWY-5461	MetaCyc:PWY-5466	MetaCyc:PWY-5469	MetaCyc:PWY-6824
MetaCyc:PWY-7214	MetaCyc:PWY-7445	InterPro:Peroxidase_pln	SUPFAM:SSF48113	UniParc:UPI000295FF07	SEG:seg

Description

hypothetical protein

Coordinates

chr4:-:9106497..9107434

Molecular Weight (calculated)

20804.2 Da

IEP (calculated)

9.267

GRAVY (calculated)

-0.251

Length

182 amino acids

Sequence
(BLAST)

001: AEDIITEQVK LLYKRHKNTT FSWLRNIFHD CVVQSCDASL LLDSTRRSLS EKETNKNFES RNFRYIETIK EALERECPRV VSCADILVLS TRDGIKDQSI
101: FSVGISPHIL LKTGRKDGRK SKTNVVELFR PNHNKSIFVV LDKFGAIGID TPSIVALLGT IHSPLTHPCT YIYEMTIRIK HT

Best Arabidopsis Sequence Match ( AT2G37130.1 )
(BLAST)

001: MANAKPFCLL GFFCLLLQLF SIFHIGNGEL EMNYYKESCP KAEEIIRQQV ETLYYKHGNT AVSWLRNLFH DCVVKSCDAS LLLETARGVE SEQKSKRSFG
101: MRNFKYVKII KDALEKECPS TVSCADIVAL SARDGIVMLK GPKIEMIKTG RRDSRGSYLG DVETLIPNHN DSLSSVISTF NSIGIDVEAT VALLGAHSVG
201: RVHCVNLVHR LYPTIDPTLD PSYALYLKKR CPSPTPDPNA VLYSRNDRET PMVVDNMYYK NIMAHKGLLV IDDELATDPR TAPFVAKMAA DNNYFHEQFS
301: RGVRLLSETN PLTGDQGEIR KDCRYVN

Arabidopsis Description

PER21Peroxidase 21 [Source:UniProtKB/Swiss-Prot;Acc:Q42580]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.