Factsheet for AT4G21960.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

endoplasmic reticulum 5
golgi 5
extracellular 7
vacuole 4
plasma membrane 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	endoplasmic reticulum, extracellular, golgi
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra013576.1-P	Field mustard	extracellular	92.12	91.84
CDX79113	Canola	extracellular	92.12	91.84
CDX82887	Canola	extracellular	92.12	91.84
Solyc02g080530.2.1	Tomato	extracellular	78.18	79.14
PGSC0003DMT400042428	Potato	extracellular	77.88	78.83
VIT_10s0116g01780.t01	Wine grape	extracellular	77.88	76.95
KRH62311	Soybean	cytosol	35.15	63.74
Solyc02g032830.1.1	Tomato	cytosol	53.94	62.46
PGSC0003DMT400051161	Potato	extracellular	25.15	59.29
AT2G37130.1	Thale cress	extracellular	51.82	52.29
AT3G17070.1	Thale cress	endoplasmic reticulum, extracellular	26.36	25.66
AT3G42570.1	Thale cress	cytosol	10.91	24.0

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	MapMan:35.1	EntrezGene:828285	ProteinID:AEE84535.1
EMBL:AF083767	EMBL:AF325015	EMBL:AF428379	EMBL:AL022140	ArrayExpress:AT4G21960	EnsemblPlantsGene:AT4G21960
RefSeq:AT4G21960	TAIR:AT4G21960	RefSeq:AT4G21960-TAIR-G	EnsemblPlants:AT4G21960.1	TAIR:AT4G21960.1	EMBL:AY056809
EMBL:AY058071	EMBL:AY059810	EMBL:AY132009	ProteinID:CAA17163.1	ProteinID:CAB79151.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004601	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618
GO:GO:0005623	GO:GO:0006950	GO:GO:0006979	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009505	GO:GO:0009506	GO:GO:0009664	GO:GO:0009987	GO:GO:0016043	GO:GO:0016491
GO:GO:0020037	GO:GO:0030312	GO:GO:0042744	GO:GO:0046872	GO:GO:0048511	GO:GO:0055114
GO:GO:0098869	InterPro:Haem_peroxidase	InterPro:Haem_peroxidase_pln/fun/bac	InterPro:IPR002016	RefSeq:NP_567641.1	PFAM:PF00141
PO:PO:0000013	PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078
PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0005052	PO:PO:0007064	PO:PO:0007095
PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616
PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025
PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047
PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022
PO:PO:0025281	PRINTS:PR00458	PRINTS:PR00461	Symbol:PRXR1	PFscan:PS50873	PANTHER:PTHR31235
PANTHER:PTHR31235:SF69	InterPro:Peroxidase_pln	UniProt:Q9SB81	SUPFAM:SSF48113	InterPro:Secretory_peroxidase	SignalP:SignalP-noTM
UniParc:UPI0000131543	EMBL:X98189	EMBL:X98313	EMBL:Z17792	:	:

Description

PER42Peroxidase 42 [Source:UniProtKB/Swiss-Prot;Acc:Q9SB81]

Coordinates

chr4:-:11646109..11648644

Molecular Weight (calculated)

37297.0 Da

IEP (calculated)

7.783

GRAVY (calculated)

-0.399

Length

330 amino acids

Sequence
(BLAST)

001: MGGKGVMMVA ILCLWALSAT SEAVTEAEPG LMMNFYKDTC PQAEDIVREQ VKLLYKRHKN TAFSWLRNIF HDCAVESCDA SLLLDSTRRE LGEKEHDRSF
101: GLRNFRYIEE IKEALERECP GVVSCSDILV LSAREGIEAV GGPYIPLKTG RRDGLKSRTD MLESYLPDHN ESISVVLEKF KSIGIDTPGL VALLGSHSVG
201: RTHCVKLVHR LYPEVDPSLN PDHVPHMLHK CPDSIPDPKA VQYVRNDRGT PMVLDNNYYR NILDNKGLLL VDHQLAHDKR TRPIVKKMAK DQAYFFKEFT
301: RAIQILSENN PLTGSKGEIR KQCNLANKNH

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.