Factsheet for Solyc02g080530.2.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc04g008430.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G21960.1	Solyc04g008430.1.1	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400042428	Potato	extracellular	96.32	96.32
VIT_10s0116g01780.t01	Wine grape	extracellular	82.82	80.84
Bra013576.1-P	Field mustard	extracellular	81.29	80.06
CDX79113	Canola	extracellular	81.29	80.06
CDX82887	Canola	extracellular	81.29	80.06
KRH02070	Soybean	extracellular	80.98	79.76
AT4G21960.1	Thale cress	extracellular	79.14	78.18
KRH51085	Soybean	endoplasmic reticulum	80.06	77.68
Solyc02g032830.1.1	Tomato	cytosol	61.96	70.88
Solyc09g007520.2.1	Tomato	extracellular	54.6	54.94
Solyc10g084240.1.1	Tomato	extracellular	54.6	54.1

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004601	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623
GO:GO:0006950	GO:GO:0006979	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009505
GO:GO:0009506	GO:GO:0009664	GO:GO:0009987	GO:GO:0016043	GO:GO:0016491	GO:GO:0020037
GO:GO:0030312	GO:GO:0042744	GO:GO:0046872	GO:GO:0055114	GO:GO:0098869	InterPro:Haem_peroxidase
InterPro:Haem_peroxidase_pln/fun/bac	InterPro:IPR002016	UniProt:K4B9S4	PFAM:PF00141	PRINTS:PR00458	PRINTS:PR00461
PFscan:PS50873	PANTHER:PTHR31235	PANTHER:PTHR31235:SF69	InterPro:Peroxidase_pln	SUPFAM:SSF48113	InterPro:Secretory_peroxidase
SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc02g080530.2	EnsemblPlants:Solyc02g080530.2.1	UniParc:UPI000276902F	SEG:seg	:

Description

Peroxidase [Source:UniProtKB/TrEMBL;Acc:K4B9S4]

Coordinates

chr2:-:44739605..44741297

Molecular Weight (calculated)

37182.1 Da

IEP (calculated)

8.863

GRAVY (calculated)

-0.375

Length

326 amino acids

Sequence
(BLAST)

001: MATKHLFFFA ILLFSAASVF AEENPSLVMD YYKDTCPQAE EIIKEQVKLL YKRHKNTAFS WLRNIFHDCF VESCDASLLL DSTRRMLSEK ETDRSFGMRN
101: FRYIETIKEA VERECPGVVS CADILVLSGR DGIVALGGPH IPLKTGRRDG RKSRADILEQ HLPDHNESMS VVLERFANIG INTPGVVALL GSHSVGRTHC
201: VKLVHRLYPE VDPQLNPEHV PHMLKKCPDP IPDPKAVQYV RNDRGTPMVL DNNYYRNILD NKGLMLVDHQ LAMDKRTKPY VKKMAKSQNY FFKEFARAIT
301: ILSENNPLTG TKGEIRKQCN LANKLH

Best Arabidopsis Sequence Match ( AT4G21960.1 )
(BLAST)

001: MGGKGVMMVA ILCLWALSAT SEAVTEAEPG LMMNFYKDTC PQAEDIVREQ VKLLYKRHKN TAFSWLRNIF HDCAVESCDA SLLLDSTRRE LGEKEHDRSF
101: GLRNFRYIEE IKEALERECP GVVSCSDILV LSAREGIEAV GGPYIPLKTG RRDGLKSRTD MLESYLPDHN ESISVVLEKF KSIGIDTPGL VALLGSHSVG
201: RTHCVKLVHR LYPEVDPSLN PDHVPHMLHK CPDSIPDPKA VQYVRNDRGT PMVLDNNYYR NILDNKGLLL VDHQLAHDKR TRPIVKKMAK DQAYFFKEFT
301: RAIQILSENN PLTGSKGEIR KQCNLANKNH

Arabidopsis Description

PER42Peroxidase 42 [Source:UniProtKB/Swiss-Prot;Acc:Q9SB81]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.