Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH74533 | Soybean | nucleus | 84.62 | 82.24 |
| VIT_00s0225g00120.t01 | Wine grape | nucleus | 64.42 | 62.62 |
| KRG99417 | Soybean | cytosol | 68.27 | 59.66 |
| KRH45611 | Soybean | cytosol | 73.08 | 57.58 |
| KRG93247 | Soybean | nucleus | 52.88 | 50.93 |
| KRH56563 | Soybean | nucleus | 51.92 | 49.09 |
| PGSC0003DMT400047922 | Potato | nucleus | 45.19 | 40.17 |
Protein Annotations
| EMBL:ACUP02000722 | EnsemblPlants:KRH69625 | EnsemblPlantsGene:GLYMA_02G038200 | EntrezGene:100803779 | PANTHER:PTHR33142 | PANTHER:PTHR33142:SF2 |
| ProteinID:KRH69625 | ProteinID:KRH69625.1 | SEG:seg | UniParc:UPI0002336E4B | UniProt:I1JC66 | MapMan:13.1.1.3.2 |
Description
hypothetical protein
Coordinates
chr2:+:3561793..3562671
Molecular Weight (calculated)
11688.8 Da
IEP (calculated)
8.057
GRAVY (calculated)
-0.953
Length
104 amino acids
Sequence
(BLAST)
(BLAST)
001: MGFSEKPQVE ESDSTRKWVI AGIPSRVPLK PIYTTKEEEH DEEECSSTTP KGEEAKIPTS LKCPPAPKKR KPSLKCNYRG GGGSREFFTP PDLETVFIRH
101: VERA
101: VERA
001: MGYSGKPHHQ LDGEIRESTD GKKWVIAGIP SRSPLKQINL SPGVTVTETE EQDQCPTTPT AVSVRIPRVP PCPAAPKKRK PSLKCSYVTV TRDYFSPPDL
101: ETVFIQRASY
101: ETVFIQRASY
Arabidopsis Description
SMR8Cyclin-dependent protein kinase inhibitor SMR8 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAD3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.