Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_00s0225g00120.t01 | Wine grape | nucleus | 42.73 | 46.73 |
| KRH69625 | Soybean | nucleus | 40.17 | 45.19 |
| PGSC0003DMT400032809 | Potato | nucleus | 40.17 | 42.34 |
| KRH74533 | Soybean | nucleus | 38.46 | 42.06 |
| PGSC0003DMT400017807 | Potato | cytosol | 36.75 | 41.35 |
| KRG99417 | Soybean | cytosol | 39.32 | 38.66 |
| KRH45611 | Soybean | cytosol | 41.03 | 36.36 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400047922 | EnsemblPlantsGene:PGSC0003DMG400018626 | PANTHER:PTHR33142 | PANTHER:PTHR33142:SF2 | PGSC:PGSC0003DMG400018626 | SEG:seg |
| UniParc:UPI0002961202 | UniProt:M1BLM7 | MapMan:13.1.1.3.2 | : | : | : |
Description
Gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400018626]
Coordinates
chr5:+:10041491..10042133
Molecular Weight (calculated)
13519.0 Da
IEP (calculated)
9.154
GRAVY (calculated)
-1.022
Length
117 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLISKKSMD GNHVLESSEG KKGWMITLRS PLKPILTSKN WKNSKHVDDE EEQEIATTPT YEESKLSRKY LTCPPPPKKR KTSSRCTHHD YSSNNNREFF
101: HPPLDLESVF MSMHTLN
101: HPPLDLESVF MSMHTLN
001: MGFSKKSQFE GGLESDGKKW VIAGISIRAS LKPVKTKLRA PPEIVTEVEE DCYNEEEECS TTPTAKETKI PELLECPPAP RKRRPALKCR SNVVREFFTP
101: PSDLETVFLR RR
101: PSDLETVFLR RR
Arabidopsis Description
SMR6Cyclin-dependent protein kinase inhibitor SMR6 [Source:UniProtKB/Swiss-Prot;Acc:Q29Q81]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.