Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH74533 | Soybean | nucleus | 64.49 | 64.49 |
| KRH69625 | Soybean | nucleus | 62.62 | 64.42 |
| VIT_14s0066g00600.t01 | Wine grape | nucleus | 59.81 | 62.14 |
| KRG99417 | Soybean | cytosol | 62.62 | 56.3 |
| KRH45611 | Soybean | cytosol | 63.55 | 51.52 |
| PGSC0003DMT400047922 | Potato | nucleus | 46.73 | 42.73 |
Protein Annotations
| ArrayExpress:VIT_00s0225g00120 | EMBL:FN595256 | EnsemblPlants:VIT_00s0225g00120.t01 | EnsemblPlantsGene:VIT_00s0225g00120 | EntrezGene:100266480 | EntrezGene:LOC100266480 |
| PANTHER:PTHR33142 | PANTHER:PTHR33142:SF2 | ProteinID:CCB48316 | ProteinID:CCB48316.1 | RefSeq:XP_002273869 | RefSeq:XP_002273869.1 |
| SEG:seg | TIGR:TC63404 | unigene:Vvi.16062 | UniParc:UPI0001986274 | UniProt:F6H7W9 | wikigene:100266480 |
| wikigene:LOC100266480 | MapMan:13.1.1.3.2 | : | : | : | : |
Description
No Description!
Coordinates
chrUn:-:14675027..14675585
Molecular Weight (calculated)
12053.3 Da
IEP (calculated)
7.189
GRAVY (calculated)
-0.730
Length
107 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLFAEKLQV DGGLESENKK WVISGIQLRA PLKPVYTSPV GKERDEEGEE CSTPTYEEAR IPTTLTCPPA PRKRKPSSRC NYNGVREFFT PPDLETVFIR
101: HVERASS
101: HVERASS
001: MGFSKKSQFE GGLESDGKKW VIAGISIRAS LKPVKTKLRA PPEIVTEVEE DCYNEEEECS TTPTAKETKI PELLECPPAP RKRRPALKCR SNVVREFFTP
101: PSDLETVFLR RR
101: PSDLETVFLR RR
Arabidopsis Description
SMR6Cyclin-dependent protein kinase inhibitor SMR6 [Source:UniProtKB/Swiss-Prot;Acc:Q29Q81]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.