Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- mitochondrion 4
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d026709_P001 | Maize | cytosol | 67.52 | 94.64 |
| TraesCS2B01G616800.1 | Wheat | mitochondrion | 63.06 | 88.39 |
| TraesCS2D01G566900.1 | Wheat | mitochondrion | 63.06 | 88.39 |
| HORVU2Hr1G127630.1 | Barley | cytosol | 61.78 | 85.84 |
| EES18250 | Sorghum | cytosol | 57.32 | 80.36 |
| EES03996 | Sorghum | cytosol | 56.69 | 79.46 |
Protein Annotations
| Gene3D:1.10.760.10 | MapMan:2.4.4.1 | UniProt:A0A1B6PPC8 | InterPro:Cyt_c-like_dom | InterPro:Cyt_c-like_dom_sf | InterPro:Cyt_c_1A/1B |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005739 | GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0020037 | GO:GO:0022900 | GO:GO:0046872 | GO:GO:0055114 |
| GO:GO:0070469 | InterPro:IPR009056 | InterPro:IPR036909 | EnsemblPlants:KXG27531 | ProteinID:KXG27531 | ProteinID:KXG27531.1 |
| PFAM:PF00034 | PRINTS:PR00604 | PFscan:PS51007 | PANTHER:PTHR11961 | PANTHER:PTHR11961:SF9 | EnsemblPlantsGene:SORBI_3006G282000 |
| SUPFAM:SSF46626 | UniParc:UPI00081AE160 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr6:+:61206180..61207599
Molecular Weight (calculated)
17246.6 Da
IEP (calculated)
9.645
GRAVY (calculated)
-0.462
Length
157 amino acids
Sequence
(BLAST)
(BLAST)
001: MCMHVHLACS RSIIKLRSSH TAHVQAVDDD SRISIRSDRD SRAMASSFGE APVGDAGSGE KIFRTKCAQC HTVERGGAHK QGPNLHGLFG RQSGTTLGYA
101: YSTANKNMAV VWEETTLYDY LLNPKKYIPG TKMVFPGLKK PKERTDLIAY LKESTAA
101: YSTANKNMAV VWEETTLYDY LLNPKKYIPG TKMVFPGLKK PKERTDLIAY LKESTAA
001: MASFDEAPPG NAKAGEKIFR TKCAQCHTVE AGAGHKQGPN LNGLFGRQSG TTAGYSYSAA NKNKAVEWEE KALYDYLLNP KKYIPGTKMV FPGLKKPQDR
101: ADLIAYLKES TAPK
101: ADLIAYLKES TAPK
Arabidopsis Description
CYTC-1CYTC-1 [Source:UniProtKB/TrEMBL;Acc:A0A178W284]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.