Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G616800.1 | Wheat | mitochondrion | 88.39 | 88.39 |
| TraesCS2D01G566900.1 | Wheat | mitochondrion | 88.39 | 88.39 |
| HORVU2Hr1G127630.1 | Barley | cytosol | 86.61 | 85.84 |
| Zm00001d010236_P001 | Maize | plastid | 79.46 | 79.46 |
| Zm00001d038218_P001 | Maize | mitochondrion | 78.57 | 78.57 |
| Zm00001d042600_P001 | Maize | cytosol | 78.57 | 78.57 |
| KXG27531 | Sorghum | mitochondrion | 94.64 | 67.52 |
Protein Annotations
| Gene3D:1.10.760.10 | EntrezGene:103642229 | MapMan:2.4.4.1 | ProteinID:AQK47576.1 | InterPro:Cyt_c-like_dom | InterPro:Cyt_c-like_dom_sf |
| InterPro:Cyt_c_1A/1B | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009055 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0020037 | GO:GO:0022900 | GO:GO:0046872 |
| GO:GO:0055114 | GO:GO:0070469 | InterPro:IPR009056 | InterPro:IPR036909 | UniProt:K7UNJ8 | PFAM:PF00034 |
| PRINTS:PR00604 | PFscan:PS51007 | PANTHER:PTHR11961 | PANTHER:PTHR11961:SF9 | SUPFAM:SSF46626 | UniParc:UPI0002209F59 |
| EnsemblPlantsGene:Zm00001d026709 | EnsemblPlants:Zm00001d026709_P001 | EnsemblPlants:Zm00001d026709_T001 | : | : | : |
Description
Cytochrome c
Coordinates
chr10:+:150747535..150747980
Molecular Weight (calculated)
12219.6 Da
IEP (calculated)
9.645
GRAVY (calculated)
-0.552
Length
112 amino acids
Sequence
(BLAST)
(BLAST)
001: MASFGEAPGG DAGSGEKIFR TKCAQCHTVE RGGAHRQGPN LHGLFGRQSG TTLGYAYSTA NKNMAVVWEE GTLYDYLFNP KKYIPGTKMV FPGLKKPKER
101: TDLIAYLKES TA
101: TDLIAYLKES TA
001: MASFDEAPPG NAKAGEKIFR TKCAQCHTVE AGAGHKQGPN LNGLFGRQSG TTAGYSYSAA NKNKAVEWEE KALYDYLLNP KKYIPGTKMV FPGLKKPQDR
101: ADLIAYLKES TAPK
101: ADLIAYLKES TAPK
Arabidopsis Description
CYTC-1CYTC-1 [Source:UniProtKB/TrEMBL;Acc:A0A178W284]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.