CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES07638	Sorghum	mitochondrion	33.51	12.88
EES16005	Sorghum	mitochondrion, nucleus	31.38	12.22
EES18406	Sorghum	plastid	29.26	12.06
OQU79156	Sorghum	cytosol	4.79	5.45
Os02t0159400-01	Rice	nucleus	5.32	3.33

Protein Annotations

EnsemblPlants:OQU76005	EnsemblPlantsGene:SORBI_3010G073432	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	PANTHER:PTHR31789
PANTHER:PTHR31789:SF3	ProteinID:OQU76005	ProteinID:OQU76005.1	UniParc:UPI0009DC9302	UniProt:A0A1W0VRX5	MapMan:35.2

Description

hypothetical protein

Coordinates

chr10:+:5992480..5993151

Molecular Weight (calculated)

21762.5 Da

IEP (calculated)

5.559

GRAVY (calculated)

-0.559

Length

188 amino acids

Sequence
(BLAST)

001: MVVSVQIWND DDVNLIEQTN KHQKLLSVYD LNAKRLLLRF NKNILIASCN SHDEQVVLLE DNEVPGNYKD NDCIDSDTYV TRDNNYAMIY SRKHIEKSRQ
101: GINIHREFSS IGSINIFNTF NGESVWKINP CDDVDLAIAT RKESGNNMTN SRSILHEALQ DVTTLLYDEE RHIIYTGNKR GLFHVWSN

Best Arabidopsis Sequence Match ( AT3G54190.1 )
(BLAST)

001: MEGRRITASP RPCSGRRIVA KKRSRPDGFV NSVKKLQRRE ISSRKDRAFS ISTAQERFRN MRLVEQYDTH DPKGHCLVAL PFLMKRTKVI EIVAARDIVF
101: ALAHSGVCAA FSRESNKRIC FLNVSPDEVI RSLFYNKNND SLITVSVYAS DNFSSLKCRS TRIEYILRGQ PDAGFALFES ESLKWPGFVE FDDVNGKVLT
201: YSAQDSVYKV FDLKNYTMLY SISDKNVQEI KISPGIMLLI FKRAASHVPL KILSIEDGTV LKSFNHLLHR NKKVDFIEQF NEKLLVKQEN ENLQILDVRN
301: AELMEVSRAE FMTPSAFIFL YENQLFLTFR NRNVSVWNFR GELVTSFEDH LLWHPDCNTN NIYITSDQDL IISYCKADTE DQWIEGNAGS INISNILTGK
401: CLAKITPSSG PPKDDESSSS NCMGKNSKQR RNAVAEALED ITALFYDEER NEIYTGNRHG LVHVWSN

Arabidopsis Description

AT3g54190/F24B22_150 [Source:UniProtKB/TrEMBL;Acc:Q9C5G8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.