Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d037446_P005 | Maize | nucleus | 86.31 | 80.32 |
| Os06t0496000-01 | Rice | plasma membrane | 64.7 | 60.29 |
| EES02617 | Sorghum | nucleus, plastid | 41.84 | 40.63 |
Protein Annotations
| Gene3D:2.30.30.100 | MapMan:35.1 | EntrezGene:8072925 | UniProt:C5Z2C6 | InterPro:DFDF | ProteinID:EER89730.1 |
| InterPro:FDF_dom | InterPro:FFD_box | InterPro:IPR025761 | InterPro:IPR025762 | InterPro:IPR025768 | InterPro:LSM_dom_sf |
| InterPro:Lsm14-like_N | EnsemblPlants:OQU76369 | ProteinID:OQU76369 | ProteinID:OQU76369.1 | PFAM:PF09532 | PFAM:PF12701 |
| PFscan:PS51512 | PFscan:PS51513 | PFscan:PS51536 | PANTHER:PTHR13586 | PANTHER:PTHR13586:SF11 | SMART:SM01199 |
| SMART:SM01271 | EnsemblPlantsGene:SORBI_3010G138200 | SUPFAM:SSF50182 | unigene:Sbi.1483 | InterPro:TFG_box | UniParc:UPI0001A89646 |
| RefSeq:XP_002438363.1 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr10:-:22435196..22444073
Molecular Weight (calculated)
68259.8 Da
IEP (calculated)
9.238
GRAVY (calculated)
-0.493
Length
643 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAAAAAPE SYIGSLISLM SKSEIRYEGV LYTINTEESS IGLRNVRSFG TEGRKKDGQQ IPASDKIYEY ILFRGSDIKD LQVKSSPPSQ SATLHNDPAI
101: IQSHYPHPAS LSTSLPSAAS TTTANPTSHN APSMIQMPPP FQGNLPPYQS GTSLQSWNSS PMPSSANGTG LTMPPMYWPG YYTPPTGFPH LQPPPFLRPP
201: HSLAVPQALQ LPIQYPGLGS LPTGFPSMPE LPSFLQPGNS NSLSQTSGVP TSVSVPASLS TSETESSRSQ LPNKWSSDSA SVVSVSFAPP SVTPSVSTDE
301: PSMPVSQVLP SLVNSKPVAL PDSTVPSLST DKPVIVLDAS VPTYLSSSQP PSANDASPVN VAEQVPLVTP GQLLATTSST IVSSHALQTS AVVPSSKAVP
401: SSVPSSQATL SVASPTQVAS SSVLSQQVEV TSESKPAKQR EWKAKQPVVA TPGNKKALLP APKPVLQKPV GVSSYVQYNN RGRGRGRGHG RGNGQSHPIT
501: KFTEDFDFMA MNEKFNKDEV WGHLGKSIGQ LNDEPNGYGD VLEDDEISPR KPEAMAVYVK DDFFDSLSCN TIDNGGRNGR VKFSEQRKID TETFGDSARH
601: RPTGIRGRAP RGGGGGPRGR GYYGRGYGYM GRGRGYSYPN HQS
101: IQSHYPHPAS LSTSLPSAAS TTTANPTSHN APSMIQMPPP FQGNLPPYQS GTSLQSWNSS PMPSSANGTG LTMPPMYWPG YYTPPTGFPH LQPPPFLRPP
201: HSLAVPQALQ LPIQYPGLGS LPTGFPSMPE LPSFLQPGNS NSLSQTSGVP TSVSVPASLS TSETESSRSQ LPNKWSSDSA SVVSVSFAPP SVTPSVSTDE
301: PSMPVSQVLP SLVNSKPVAL PDSTVPSLST DKPVIVLDAS VPTYLSSSQP PSANDASPVN VAEQVPLVTP GQLLATTSST IVSSHALQTS AVVPSSKAVP
401: SSVPSSQATL SVASPTQVAS SSVLSQQVEV TSESKPAKQR EWKAKQPVVA TPGNKKALLP APKPVLQKPV GVSSYVQYNN RGRGRGRGHG RGNGQSHPIT
501: KFTEDFDFMA MNEKFNKDEV WGHLGKSIGQ LNDEPNGYGD VLEDDEISPR KPEAMAVYVK DDFFDSLSCN TIDNGGRNGR VKFSEQRKID TETFGDSARH
601: RPTGIRGRAP RGGGGGPRGR GYYGRGYGYM GRGRGYSYPN HQS
001: MAADNTGSKS SSAADSYVGS LISLTSKSEI RYEGILYNIN TDESSIGLQN VRSFGTEGRK KDGPQVPPSD KVYEYILFRG TDIKDLQVKA SPPVQPPAST
101: INNDPAIIQS HYPSPMPTSG SLPSTASGSL PDISSHNGQP GQHGMGFQNA MPLYQPGGNL GSWGASPQPP MYWQGFYTPP PNGLPQLHQQ SLIRPPHGLP
201: MPNSLQQPLQ YPNFNTPPPP TGSSSLQGSS LPEAPSSLFP FSTSSQMLAP SSLPFPGLPP VTLSSSLQST LQSAPSPSLA SEMAPPLLSN KAPITAPPTL
301: PQDTNLLSFS LSTTRATEAS TGLPLSNKPS VVTGPISPPQ TTPLTSAPVA GVSSSISQDK PKPLLVTPGQ LLQSGSSAVS LSPPSTNADK DVEVVQVSSS
401: AGLEQSVPVT SEAQPPILPL PSSARPTQKP NGHSFPNHNG YRGRGRGRGR GAGRSHQVMK FTEDFDFTAM NEKFNKDEVW GHLGKSTTLD GDEDDDSPTV
501: DEAELPKIEA KPVYNKDDFF DSLSSNTIDR ESQNSRPRFS EQRKLDTETF GEFSRFRGGR GGRGGYGRNN GYSRGGYGGR GYGGYGGRGG GGGGYGYGGR
601: GQGRGVSNRT T
101: INNDPAIIQS HYPSPMPTSG SLPSTASGSL PDISSHNGQP GQHGMGFQNA MPLYQPGGNL GSWGASPQPP MYWQGFYTPP PNGLPQLHQQ SLIRPPHGLP
201: MPNSLQQPLQ YPNFNTPPPP TGSSSLQGSS LPEAPSSLFP FSTSSQMLAP SSLPFPGLPP VTLSSSLQST LQSAPSPSLA SEMAPPLLSN KAPITAPPTL
301: PQDTNLLSFS LSTTRATEAS TGLPLSNKPS VVTGPISPPQ TTPLTSAPVA GVSSSISQDK PKPLLVTPGQ LLQSGSSAVS LSPPSTNADK DVEVVQVSSS
401: AGLEQSVPVT SEAQPPILPL PSSARPTQKP NGHSFPNHNG YRGRGRGRGR GAGRSHQVMK FTEDFDFTAM NEKFNKDEVW GHLGKSTTLD GDEDDDSPTV
501: DEAELPKIEA KPVYNKDDFF DSLSSNTIDR ESQNSRPRFS EQRKLDTETF GEFSRFRGGR GGRGGYGRNN GYSRGGYGGR GYGGYGGRGG GGGGYGYGGR
601: GQGRGVSNRT T
Arabidopsis Description
DCP5Protein decapping 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9C658]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.