Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU76369 | Sorghum | nucleus | 80.32 | 86.31 |
| Zm00001d051566_P001 | Maize | nucleus | 8.25 | 63.33 |
| Os06t0496000-01 | Rice | plasma membrane | 59.77 | 59.86 |
| Zm00001d008439_P001 | Maize | plasma membrane | 39.07 | 41.6 |
| Zm00001d040142_P001 | Maize | nucleus, plastid | 38.35 | 40.96 |
| Zm00001d027310_P001 | Maize | nucleus, plastid | 15.2 | 33.65 |
Protein Annotations
| EntrezGene:100272404 | Gene3D:2.30.30.100 | MapMan:35.1 | UniProt:A0A1D6LXW1 | ProteinID:AQK83988.1 | InterPro:DFDF |
| InterPro:FDF_dom | InterPro:FFD_box | InterPro:IPR025761 | InterPro:IPR025762 | InterPro:IPR025768 | InterPro:LSM_dom_sf |
| InterPro:Lsm14-like_N | PFAM:PF09532 | PFAM:PF12701 | PFscan:PS51512 | PFscan:PS51513 | PFscan:PS51536 |
| PANTHER:PTHR13586 | PANTHER:PTHR13586:SF11 | SMART:SM01199 | SMART:SM01271 | SUPFAM:SSF50182 | InterPro:TFG_box |
| UniParc:UPI000844AD92 | EnsemblPlantsGene:Zm00001d037446 | EnsemblPlants:Zm00001d037446_P005 | EnsemblPlants:Zm00001d037446_T005 | SEG:seg | : |
Description
Protein decapping 5
Coordinates
chr6:+:125606316..125619872
Molecular Weight (calculated)
74066.8 Da
IEP (calculated)
7.338
GRAVY (calculated)
-0.431
Length
691 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAAAAAAA APESYIGSLI SLMSKSEIRY EGVLYTINTE ESSIGLKNVR SFGTEGRKKD GQQIPASDKI YEYILFRGSD IKDLQVKSSP PSQSATLHND
101: PAIIQSHYPH PASLSTSLPS AASTIGANPT SQNAPSLIQM PPPFQGNLPP YQSGTSLQSW NSAPMPSSAN GTGLTMPPMY WPGYYTPPTG FSHLQPPLFL
201: RPPHSLAVPQ VLQLPVQYPG LGSLPAGFPN MPELPSFLQP GNSNSLNQTS GVPTSVSTPA SLSTSQTESS RSQLPNKFSS DSASVFSVGF TPPSVTPSVS
301: TVEPSIPVSA VLPSLVNSKP VALPDSTMPS LSTAKPVIVP DASVLTYLSS QPPSANDVSP VNAAEQVPLV TPGQLLSTTS STIISSHALQ TASAVDLSSK
401: AAPSTVPSSQ ATLFEGSTTQ VASSSILSQQ VAMTNESKVA KQREWKAKQT VVGRPGNKEP LLPEPKSVFQ KPVGVSSYVR YNSRGRGRGR GRGVCFSENM
501: FCPTNFENQE VFEISDPGLP LFGYFTGQIF EEMSGSSLSF SLQQSHPITK FTEDFDFMAM NEKFNKDEVW GHLGKRIGQL NDEPNGYEDD VIEDDEISPR
601: KPEAKAVYVK DDFFDSLSCN QIDNGGRNGR VKFSEQRKID TETFGDSARH RPMGIRGRGP RGGARGRGYY GIRGYGYTGR GRGYSYPNHQ P
101: PAIIQSHYPH PASLSTSLPS AASTIGANPT SQNAPSLIQM PPPFQGNLPP YQSGTSLQSW NSAPMPSSAN GTGLTMPPMY WPGYYTPPTG FSHLQPPLFL
201: RPPHSLAVPQ VLQLPVQYPG LGSLPAGFPN MPELPSFLQP GNSNSLNQTS GVPTSVSTPA SLSTSQTESS RSQLPNKFSS DSASVFSVGF TPPSVTPSVS
301: TVEPSIPVSA VLPSLVNSKP VALPDSTMPS LSTAKPVIVP DASVLTYLSS QPPSANDVSP VNAAEQVPLV TPGQLLSTTS STIISSHALQ TASAVDLSSK
401: AAPSTVPSSQ ATLFEGSTTQ VASSSILSQQ VAMTNESKVA KQREWKAKQT VVGRPGNKEP LLPEPKSVFQ KPVGVSSYVR YNSRGRGRGR GRGVCFSENM
501: FCPTNFENQE VFEISDPGLP LFGYFTGQIF EEMSGSSLSF SLQQSHPITK FTEDFDFMAM NEKFNKDEVW GHLGKRIGQL NDEPNGYEDD VIEDDEISPR
601: KPEAKAVYVK DDFFDSLSCN QIDNGGRNGR VKFSEQRKID TETFGDSARH RPMGIRGRGP RGGARGRGYY GIRGYGYTGR GRGYSYPNHQ P
001: MAADNTGSKS SSAADSYVGS LISLTSKSEI RYEGILYNIN TDESSIGLQN VRSFGTEGRK KDGPQVPPSD KVYEYILFRG TDIKDLQVKA SPPVQPPAST
101: INNDPAIIQS HYPSPMPTSG SLPSTASGSL PDISSHNGQP GQHGMGFQNA MPLYQPGGNL GSWGASPQPP MYWQGFYTPP PNGLPQLHQQ SLIRPPHGLP
201: MPNSLQQPLQ YPNFNTPPPP TGSSSLQGSS LPEAPSSLFP FSTSSQMLAP SSLPFPGLPP VTLSSSLQST LQSAPSPSLA SEMAPPLLSN KAPITAPPTL
301: PQDTNLLSFS LSTTRATEAS TGLPLSNKPS VVTGPISPPQ TTPLTSAPVA GVSSSISQDK PKPLLVTPGQ LLQSGSSAVS LSPPSTNADK DVEVVQVSSS
401: AGLEQSVPVT SEAQPPILPL PSSARPTQKP NGHSFPNHNG YRGRGRGRGR GAGRSHQVMK FTEDFDFTAM NEKFNKDEVW GHLGKSTTLD GDEDDDSPTV
501: DEAELPKIEA KPVYNKDDFF DSLSSNTIDR ESQNSRPRFS EQRKLDTETF GEFSRFRGGR GGRGGYGRNN GYSRGGYGGR GYGGYGGRGG GGGGYGYGGR
601: GQGRGVSNRT T
101: INNDPAIIQS HYPSPMPTSG SLPSTASGSL PDISSHNGQP GQHGMGFQNA MPLYQPGGNL GSWGASPQPP MYWQGFYTPP PNGLPQLHQQ SLIRPPHGLP
201: MPNSLQQPLQ YPNFNTPPPP TGSSSLQGSS LPEAPSSLFP FSTSSQMLAP SSLPFPGLPP VTLSSSLQST LQSAPSPSLA SEMAPPLLSN KAPITAPPTL
301: PQDTNLLSFS LSTTRATEAS TGLPLSNKPS VVTGPISPPQ TTPLTSAPVA GVSSSISQDK PKPLLVTPGQ LLQSGSSAVS LSPPSTNADK DVEVVQVSSS
401: AGLEQSVPVT SEAQPPILPL PSSARPTQKP NGHSFPNHNG YRGRGRGRGR GAGRSHQVMK FTEDFDFTAM NEKFNKDEVW GHLGKSTTLD GDEDDDSPTV
501: DEAELPKIEA KPVYNKDDFF DSLSSNTIDR ESQNSRPRFS EQRKLDTETF GEFSRFRGGR GGRGGYGRNN GYSRGGYGGR GYGGYGGRGG GGGGYGYGGR
601: GQGRGVSNRT T
Arabidopsis Description
DCP5Protein decapping 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9C658]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.