Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 1
- nucleus 2
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d051566_P001 | Maize | nucleus | 21.79 | 75.56 |
| VIT_02s0087g00680.t01 | Wine grape | cytosol | 11.22 | 41.67 |
| Zm00001d008439_P001 | Maize | plasma membrane | 58.97 | 28.35 |
| Zm00001d040142_P001 | Maize | nucleus, plastid | 54.17 | 26.12 |
| EES02617 | Sorghum | nucleus, plastid | 55.13 | 25.98 |
| Os01t0111200-01 | Rice | nucleus | 47.76 | 24.03 |
| TraesCS3A01G006100.1 | Wheat | nucleus | 46.15 | 21.72 |
| TraesCS3D01G004500.1 | Wheat | plastid | 46.15 | 21.69 |
| HORVU3Hr1G000880.1 | Barley | nucleus | 45.19 | 21.36 |
| GSMUA_Achr1P20740_001 | Banana | nucleus | 37.5 | 19.86 |
| GSMUA_Achr2P07060_001 | Banana | nucleus | 36.86 | 19.39 |
| GSMUA_Achr9P00760_001 | Banana | nucleus | 36.86 | 19.13 |
| KRH75529 | Soybean | nucleus | 36.54 | 18.66 |
| VIT_01s0011g02820.t01 | Wine grape | nucleus | 36.54 | 18.51 |
| KRH70630 | Soybean | nucleus | 35.58 | 17.9 |
| KRH70633 | Soybean | nucleus | 35.26 | 17.86 |
| KRH62823 | Soybean | nucleus | 35.26 | 17.74 |
| PGSC0003DMT400002103 | Potato | nucleus | 33.65 | 17.56 |
| Solyc05g009980.2.1 | Tomato | nucleus | 32.69 | 17.03 |
| CDY55955 | Canola | nucleus | 32.37 | 16.95 |
| AT1G26110.1 | Thale cress | nucleus | 33.01 | 16.86 |
| Bra011009.1-P | Field mustard | nucleus | 32.05 | 16.75 |
| CDY36091 | Canola | nucleus | 32.05 | 16.75 |
| Solyc08g075300.2.1 | Tomato | nucleus, plastid | 16.99 | 16.72 |
| CDY20530 | Canola | nucleus | 32.05 | 16.61 |
| CDY51127 | Canola | nucleus | 29.81 | 15.9 |
| Zm00001d037446_P005 | Maize | nucleus | 33.65 | 15.2 |
| KRH76455 | Soybean | nucleus | 23.4 | 12.94 |
| Solyc03g119850.1.1 | Tomato | mitochondrion | 17.63 | 12.67 |
| CDY68331 | Canola | nucleus, plastid | 21.15 | 12.62 |
| CDY13062 | Canola | nucleus, plastid | 16.67 | 12.44 |
| Bra027601.1-P | Field mustard | nucleus, plastid | 21.47 | 12.09 |
| CDX87795 | Canola | nucleus | 19.55 | 11.87 |
| Bra021964.1-P | Field mustard | nucleus, plastid | 19.87 | 11.61 |
| AT5G45330.1 | Thale cress | nucleus, plastid | 21.15 | 11.56 |
| PGSC0003DMT400010431 | Potato | nucleus | 24.36 | 11.01 |
| KRH39773 | Soybean | endoplasmic reticulum | 20.19 | 10.7 |
| Solyc06g069280.2.1 | Tomato | nucleus | 23.72 | 10.65 |
| VIT_02s0087g00650.t01 | Wine grape | cytosol | 15.71 | 9.57 |
| KRG93865 | Soybean | cytosol | 0.96 | 5.77 |
| CDY70855 | Canola | plastid | 3.53 | 4.42 |
Protein Annotations
| EnsemblPlants:Zm00001d027310_P001 | EnsemblPlants:Zm00001d027310_T001 | EnsemblPlantsGene:Zm00001d027310 | Gene3D:2.30.30.100 | InterPro:LSM_dom_sf | InterPro:Lsm14-like_N |
| PANTHER:PTHR13586 | PANTHER:PTHR13586:SF10 | PFAM:PF12701 | ProteinID:ONL92729.1 | SEG:seg | SMART:SM01271 |
| SUPFAM:SSF50182 | UniParc:UPI0008458F3A | UniProt:A0A1D6JKM2 | MapMan:35.1 | : | : |
Description
Protein decapping 5
Coordinates
chr1:-:2650836..2653089
Molecular Weight (calculated)
32620.1 Da
IEP (calculated)
8.729
GRAVY (calculated)
-0.593
Length
312 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGSADAPPP TPPSTSPPGT PPHTKPRPLP SPSALMAEMA GSADALPPTP SPSSPPGIPP HTKPRPLPSS SPSTAPSWKA RYADAPHSLP GSDDNHDAPS
101: LPQSTAIKRM DRVRSFGTEG RKKDGVQIPA SDKVYEYILF WGTDIKSSPP QPSPPQAASL HNDPAIIQSH YSQPASTSSS LPSTGGAVLP DFSSQAVQYG
201: LQRPNFQSNL PLYQPGNTPW GSLVAPPAGN APWGSSVAPP AGNASTLLVP SMYWQGYYAP SSGLPHHLQP PPLLHPTPGL SVPQNLQYPG LNPSLQSGPQ
301: KLSELQPSLM QH
101: LPQSTAIKRM DRVRSFGTEG RKKDGVQIPA SDKVYEYILF WGTDIKSSPP QPSPPQAASL HNDPAIIQSH YSQPASTSSS LPSTGGAVLP DFSSQAVQYG
201: LQRPNFQSNL PLYQPGNTPW GSLVAPPAGN APWGSSVAPP AGNASTLLVP SMYWQGYYAP SSGLPHHLQP PPLLHPTPGL SVPQNLQYPG LNPSLQSGPQ
301: KLSELQPSLM QH
001: MAADNTGSKS SSAADSYVGS LISLTSKSEI RYEGILYNIN TDESSIGLQN VRSFGTEGRK KDGPQVPPSD KVYEYILFRG TDIKDLQVKA SPPVQPPAST
101: INNDPAIIQS HYPSPMPTSG SLPSTASGSL PDISSHNGQP GQHGMGFQNA MPLYQPGGNL GSWGASPQPP MYWQGFYTPP PNGLPQLHQQ SLIRPPHGLP
201: MPNSLQQPLQ YPNFNTPPPP TGSSSLQGSS LPEAPSSLFP FSTSSQMLAP SSLPFPGLPP VTLSSSLQST LQSAPSPSLA SEMAPPLLSN KAPITAPPTL
301: PQDTNLLSFS LSTTRATEAS TGLPLSNKPS VVTGPISPPQ TTPLTSAPVA GVSSSISQDK PKPLLVTPGQ LLQSGSSAVS LSPPSTNADK DVEVVQVSSS
401: AGLEQSVPVT SEAQPPILPL PSSARPTQKP NGHSFPNHNG YRGRGRGRGR GAGRSHQVMK FTEDFDFTAM NEKFNKDEVW GHLGKSTTLD GDEDDDSPTV
501: DEAELPKIEA KPVYNKDDFF DSLSSNTIDR ESQNSRPRFS EQRKLDTETF GEFSRFRGGR GGRGGYGRNN GYSRGGYGGR GYGGYGGRGG GGGGYGYGGR
601: GQGRGVSNRT T
101: INNDPAIIQS HYPSPMPTSG SLPSTASGSL PDISSHNGQP GQHGMGFQNA MPLYQPGGNL GSWGASPQPP MYWQGFYTPP PNGLPQLHQQ SLIRPPHGLP
201: MPNSLQQPLQ YPNFNTPPPP TGSSSLQGSS LPEAPSSLFP FSTSSQMLAP SSLPFPGLPP VTLSSSLQST LQSAPSPSLA SEMAPPLLSN KAPITAPPTL
301: PQDTNLLSFS LSTTRATEAS TGLPLSNKPS VVTGPISPPQ TTPLTSAPVA GVSSSISQDK PKPLLVTPGQ LLQSGSSAVS LSPPSTNADK DVEVVQVSSS
401: AGLEQSVPVT SEAQPPILPL PSSARPTQKP NGHSFPNHNG YRGRGRGRGR GAGRSHQVMK FTEDFDFTAM NEKFNKDEVW GHLGKSTTLD GDEDDDSPTV
501: DEAELPKIEA KPVYNKDDFF DSLSSNTIDR ESQNSRPRFS EQRKLDTETF GEFSRFRGGR GGRGGYGRNN GYSRGGYGGR GYGGYGGRGG GGGGYGYGGR
601: GQGRGVSNRT T
Arabidopsis Description
DCP5Protein decapping 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9C658]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.