Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY36091 | Canola | nucleus | 83.47 | 85.43 |
| Bra011009.1-P | Field mustard | nucleus | 83.14 | 85.09 |
| CDY55955 | Canola | nucleus | 82.32 | 84.4 |
| CDY51127 | Canola | nucleus | 75.94 | 79.32 |
| CDY20530 | Canola | nucleus | 77.41 | 78.57 |
| Zm00001d051566_P001 | Maize | nucleus | 9.33 | 63.33 |
| VIT_01s0011g02820.t01 | Wine grape | nucleus | 59.74 | 59.25 |
| KRH75529 | Soybean | nucleus | 57.12 | 57.12 |
| KRH70633 | Soybean | nucleus | 56.79 | 56.33 |
| KRH70630 | Soybean | nucleus | 56.96 | 56.13 |
| PGSC0003DMT400002103 | Potato | nucleus | 54.83 | 56.02 |
| KRH62823 | Soybean | nucleus | 56.14 | 55.32 |
| Solyc05g009980.2.1 | Tomato | nucleus | 53.52 | 54.59 |
| GSMUA_Achr1P20740_001 | Banana | nucleus | 48.77 | 50.59 |
| GSMUA_Achr2P07060_001 | Banana | nucleus | 46.97 | 48.4 |
| GSMUA_Achr9P00760_001 | Banana | nucleus | 45.83 | 46.59 |
| Os01t0111200-01 | Rice | nucleus | 45.5 | 44.84 |
| Zm00001d040142_P001 | Maize | nucleus, plastid | 45.5 | 42.97 |
| EES02617 | Sorghum | nucleus, plastid | 46.32 | 42.75 |
| Zm00001d008439_P001 | Maize | plasma membrane | 45.01 | 42.37 |
| HORVU3Hr1G000880.1 | Barley | nucleus | 44.35 | 41.06 |
| TraesCS3A01G006100.1 | Wheat | nucleus | 44.19 | 40.72 |
| TraesCS3D01G004500.1 | Wheat | plastid | 43.21 | 39.76 |
| Zm00001d027310_P001 | Maize | nucleus, plastid | 16.86 | 33.01 |
| AT5G45330.1 | Thale cress | nucleus, plastid | 27.17 | 29.07 |
Protein Annotations
| MapMan:16.8.2.2.3 | Gene3D:2.30.30.100 | EntrezGene:839152 | ProteinID:AAG50526.1 | ProteinID:AAG50671.1 | ProteinID:AEE30649.1 |
| ProteinID:AEE30650.1 | EMBL:AF361833 | EMBL:AK317540 | ArrayExpress:AT1G26110 | EnsemblPlantsGene:AT1G26110 | RefSeq:AT1G26110 |
| TAIR:AT1G26110 | RefSeq:AT1G26110-TAIR-G | EnsemblPlants:AT1G26110.1 | TAIR:AT1G26110.1 | EMBL:AY078047 | EMBL:AY093191 |
| Unigene:At.21105 | Symbol:DCP5 | InterPro:DFDF | InterPro:FDF_dom | InterPro:FFD_box | GO:GO:0000932 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003729 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006139 |
| GO:GO:0006397 | GO:GO:0006412 | GO:GO:0006417 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0010606 | GO:GO:0016043 | GO:GO:0017148 | GO:GO:0019538 |
| GO:GO:0031087 | GO:GO:0033962 | GO:GO:0042803 | InterPro:IPR025761 | InterPro:IPR025762 | InterPro:IPR025768 |
| InterPro:LSM_dom_sf | InterPro:Lsm14-like_N | RefSeq:NP_001154367.1 | RefSeq:NP_564239.1 | PFAM:PF09532 | PFAM:PF12701 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PFscan:PS51512 | PFscan:PS51513 | PFscan:PS51536 | PANTHER:PTHR13586 | PANTHER:PTHR13586:SF10 |
| UniProt:Q9C658 | SMART:SM01199 | SMART:SM01271 | SUPFAM:SSF50182 | InterPro:TFG_box | UniParc:UPI000009FA43 |
| SEG:seg | : | : | : | : | : |
Description
DCP5Protein decapping 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9C658]
Coordinates
chr1:-:9024341..9027955
Molecular Weight (calculated)
64373.7 Da
IEP (calculated)
7.927
GRAVY (calculated)
-0.657
Length
611 amino acids
Sequence
(BLAST)
(BLAST)
001: MAADNTGSKS SSAADSYVGS LISLTSKSEI RYEGILYNIN TDESSIGLQN VRSFGTEGRK KDGPQVPPSD KVYEYILFRG TDIKDLQVKA SPPVQPPAST
101: INNDPAIIQS HYPSPMPTSG SLPSTASGSL PDISSHNGQP GQHGMGFQNA MPLYQPGGNL GSWGASPQPP MYWQGFYTPP PNGLPQLHQQ SLIRPPHGLP
201: MPNSLQQPLQ YPNFNTPPPP TGSSSLQGSS LPEAPSSLFP FSTSSQMLAP SSLPFPGLPP VTLSSSLQST LQSAPSPSLA SEMAPPLLSN KAPITAPPTL
301: PQDTNLLSFS LSTTRATEAS TGLPLSNKPS VVTGPISPPQ TTPLTSAPVA GVSSSISQDK PKPLLVTPGQ LLQSGSSAVS LSPPSTNADK DVEVVQVSSS
401: AGLEQSVPVT SEAQPPILPL PSSARPTQKP NGHSFPNHNG YRGRGRGRGR GAGRSHQVMK FTEDFDFTAM NEKFNKDEVW GHLGKSTTLD GDEDDDSPTV
501: DEAELPKIEA KPVYNKDDFF DSLSSNTIDR ESQNSRPRFS EQRKLDTETF GEFSRFRGGR GGRGGYGRNN GYSRGGYGGR GYGGYGGRGG GGGGYGYGGR
601: GQGRGVSNRT T
101: INNDPAIIQS HYPSPMPTSG SLPSTASGSL PDISSHNGQP GQHGMGFQNA MPLYQPGGNL GSWGASPQPP MYWQGFYTPP PNGLPQLHQQ SLIRPPHGLP
201: MPNSLQQPLQ YPNFNTPPPP TGSSSLQGSS LPEAPSSLFP FSTSSQMLAP SSLPFPGLPP VTLSSSLQST LQSAPSPSLA SEMAPPLLSN KAPITAPPTL
301: PQDTNLLSFS LSTTRATEAS TGLPLSNKPS VVTGPISPPQ TTPLTSAPVA GVSSSISQDK PKPLLVTPGQ LLQSGSSAVS LSPPSTNADK DVEVVQVSSS
401: AGLEQSVPVT SEAQPPILPL PSSARPTQKP NGHSFPNHNG YRGRGRGRGR GAGRSHQVMK FTEDFDFTAM NEKFNKDEVW GHLGKSTTLD GDEDDDSPTV
501: DEAELPKIEA KPVYNKDDFF DSLSSNTIDR ESQNSRPRFS EQRKLDTETF GEFSRFRGGR GGRGGYGRNN GYSRGGYGGR GYGGYGGRGG GGGGYGYGGR
601: GQGRGVSNRT T
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.