Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- extracellular 3
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH76455 | Soybean | nucleus | 75.55 | 78.9 |
| Zm00001d051566_P001 | Maize | nucleus | 6.79 | 44.44 |
| Solyc08g075300.2.1 | Tomato | nucleus, plastid | 22.24 | 41.32 |
| KRG93865 | Soybean | cytosol | 3.57 | 40.38 |
| VIT_02s0087g00650.t01 | Wine grape | cytosol | 31.07 | 35.74 |
| CDY70855 | Canola | plastid | 12.73 | 30.12 |
| KRH70633 | Soybean | nucleus | 31.24 | 29.87 |
| GSMUA_Achr2P07060_001 | Banana | nucleus | 30.05 | 29.85 |
| GSMUA_Achr1P20740_001 | Banana | nucleus | 29.54 | 29.54 |
| KRH70630 | Soybean | nucleus | 31.07 | 29.52 |
| KRH75529 | Soybean | nucleus | 30.39 | 29.3 |
| AT5G45330.1 | Thale cress | nucleus, plastid | 28.35 | 29.25 |
| GSMUA_Achr9P00760_001 | Banana | nucleus | 28.69 | 28.12 |
| KRH62823 | Soybean | nucleus | 29.54 | 28.06 |
| CDX87795 | Canola | nucleus | 23.77 | 27.24 |
| Os01t0111200-01 | Rice | nucleus | 28.52 | 27.1 |
| Bra021964.1-P | Field mustard | nucleus, plastid | 23.94 | 26.4 |
| CDY68331 | Canola | nucleus, plastid | 23.26 | 26.2 |
| EES02617 | Sorghum | nucleus, plastid | 28.69 | 25.53 |
| Zm00001d040142_P001 | Maize | nucleus, plastid | 27.84 | 25.35 |
| Zm00001d008439_P001 | Maize | plasma membrane | 27.84 | 25.27 |
| HORVU3Hr1G000880.1 | Barley | nucleus | 28.18 | 25.15 |
| Bra027601.1-P | Field mustard | nucleus, plastid | 23.6 | 25.09 |
| TraesCS3A01G006100.1 | Wheat | nucleus | 27.67 | 24.59 |
| TraesCS3D01G004500.1 | Wheat | plastid | 26.66 | 23.64 |
| Zm00001d027310_P001 | Maize | nucleus, plastid | 10.7 | 20.19 |
| CDY13062 | Canola | nucleus, plastid | 13.92 | 19.62 |
Protein Annotations
| EntrezGene:102665425 | Gene3D:2.30.30.100 | MapMan:35.1 | EMBL:ACUP02005959 | InterPro:FDF_dom | InterPro:FFD_box |
| EnsemblPlantsGene:GLYMA_09G218400 | InterPro:IPR025761 | UniProt:K7LFC2 | EnsemblPlants:KRH39773 | ProteinID:KRH39773 | ProteinID:KRH39773.1 |
| InterPro:LSM_dom_sf | InterPro:Lsm14-like_N | PFAM:PF09532 | PFAM:PF12701 | PFscan:PS51513 | PANTHER:PTHR13586 |
| PANTHER:PTHR13586:SF3 | SMART:SM01199 | SMART:SM01271 | SUPFAM:SSF50182 | UniParc:UPI0002961AD3 | SEG:seg |
Description
hypothetical protein
Coordinates
chr9:-:44137088..44143694
Molecular Weight (calculated)
63353.2 Da
IEP (calculated)
6.711
GRAVY (calculated)
-0.380
Length
589 amino acids
Sequence
(BLAST)
(BLAST)
001: MATVSCANLE SFIGCFICLI SKCEIRYEGV LYFFNIQDSI IGLKDVRSYG TEGRRKDGPQ VPPSYMVYEY ILFRGNNIKN LQIKFPAPSS KLEEQVFSDP
101: AIIQSEYSGL LSSPVVGLLS SPVASVGGRS LTESIQRQDS PAISSKAFPA GLPSHQSVTQ PGPSNSSAAT QVASHPSFFA AMDWQGPSRI SSSSSHSLLQ
201: SSSRQPPSLA ASLAVQNQMQ NAETQVPIKG GWTALSDYGL PVSSAMASLV NQTHPPSLTS LKNSDSLDIP SLLSTKPPVS YSASMTFDGS NMPQFSSTLQ
301: DINSIQAQIS GNICPDPRSI HPQHSVHRSA PSFVDSTSGS LPTAPSLLTP DQFAYPREQL LSLTHLNPTQ KDMGSLTLTS SGSSALMPSP ASQAPLLPLP
401: TSVQKLPCTA PQYTEESDLE AINEKFKKNV VWGSFGKATT KIEGVDNASL PALQYTEEFD IEAINEKFKK NVVWGSFGKA ITKIEGVEDN ASLSLGDREC
501: PGVIPNPKTG YKKDDFFDTI SCNSSTGGSR SGPNLFSERM KQDTETSDSF QQRPNFTSGA GRGADFRGAN NWGRGYGYNR RGRGPNFPF
101: AIIQSEYSGL LSSPVVGLLS SPVASVGGRS LTESIQRQDS PAISSKAFPA GLPSHQSVTQ PGPSNSSAAT QVASHPSFFA AMDWQGPSRI SSSSSHSLLQ
201: SSSRQPPSLA ASLAVQNQMQ NAETQVPIKG GWTALSDYGL PVSSAMASLV NQTHPPSLTS LKNSDSLDIP SLLSTKPPVS YSASMTFDGS NMPQFSSTLQ
301: DINSIQAQIS GNICPDPRSI HPQHSVHRSA PSFVDSTSGS LPTAPSLLTP DQFAYPREQL LSLTHLNPTQ KDMGSLTLTS SGSSALMPSP ASQAPLLPLP
401: TSVQKLPCTA PQYTEESDLE AINEKFKKNV VWGSFGKATT KIEGVDNASL PALQYTEEFD IEAINEKFKK NVVWGSFGKA ITKIEGVEDN ASLSLGDREC
501: PGVIPNPKTG YKKDDFFDTI SCNSSTGGSR SGPNLFSERM KQDTETSDSF QQRPNFTSGA GRGADFRGAN NWGRGYGYNR RGRGPNFPF
001: MASESSQSSS PSSSQPPSSV PSPSPGNNVG DTFIGSFISL ISKYEIRYEG ILYHLNVQDS TLGLKNVRSC GTEGRKKDGP QIPPCDKVYD YILFRGSDIK
101: DLQVNPSPSA QSRQEIQSEQ DVNQSPHSRP AMTMSSPISG YDSGYGLGRG SQWINTPALS SKPVPVTQHS SVPLSFQPPS ANAGSLTESP VSLIDSTQSN
201: AGSSMPIPSF VQGNKFASSG VPLGMMQKPV SSSSTIPNGP QIIDYFSSPI MGLVDDSSQV VTRSPDVSSN QSYSSNPSPL GQTQLHTPPG LASVSSNLSP
301: PSEAQLSAPN IQKIYPSAPQ AIGKVVYDPQ SNHPHRSIPH ELPAVASNSA PVIPGPLSKS PESFFDMDPS LQSRQQMVYR GQEMFAATNP ASANVPSQSF
401: APRNHAPLLP LPVSAHQSRI PSSSIEYTEE FDFEAMNEKF KKSELWGYLG RNNQRNQNDY GEETAIEPNA EGKPAYNKDD FFDTISCNQL DRVARSGQQH
501: NQFPEHMRQV PEAFGNNFQR PPPLQPGQGA YLAAQTNYRG GYHNNNNNNY YSNSGYGYYS GGRGRGRNTH F
101: DLQVNPSPSA QSRQEIQSEQ DVNQSPHSRP AMTMSSPISG YDSGYGLGRG SQWINTPALS SKPVPVTQHS SVPLSFQPPS ANAGSLTESP VSLIDSTQSN
201: AGSSMPIPSF VQGNKFASSG VPLGMMQKPV SSSSTIPNGP QIIDYFSSPI MGLVDDSSQV VTRSPDVSSN QSYSSNPSPL GQTQLHTPPG LASVSSNLSP
301: PSEAQLSAPN IQKIYPSAPQ AIGKVVYDPQ SNHPHRSIPH ELPAVASNSA PVIPGPLSKS PESFFDMDPS LQSRQQMVYR GQEMFAATNP ASANVPSQSF
401: APRNHAPLLP LPVSAHQSRI PSSSIEYTEE FDFEAMNEKF KKSELWGYLG RNNQRNQNDY GEETAIEPNA EGKPAYNKDD FFDTISCNQL DRVARSGQQH
501: NQFPEHMRQV PEAFGNNFQR PPPLQPGQGA YLAAQTNYRG GYHNNNNNNY YSNSGYGYYS GGRGRGRNTH F
Arabidopsis Description
DCP5-LDecapping 5-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q9FH77]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.