Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 5
- peroxisome 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra021964.1-P | Field mustard | nucleus, plastid | 93.88 | 91.95 |
| CDX87795 | Canola | nucleus | 88.72 | 90.27 |
| VIT_02s0087g00680.t01 | Wine grape | cytosol | 11.09 | 69.05 |
| AT5G45330.1 | Thale cress | nucleus, plastid | 56.41 | 51.66 |
| CDY70855 | Canola | plastid | 22.56 | 47.39 |
| Solyc08g075300.2.1 | Tomato | nucleus, plastid | 26.58 | 43.85 |
| Zm00001d051566_P001 | Maize | nucleus | 7.27 | 42.22 |
| CDY13062 | Canola | nucleus, plastid | 26.0 | 32.54 |
| KRH76455 | Soybean | nucleus | 30.21 | 28.01 |
| GSMUA_Achr1P20740_001 | Banana | nucleus | 30.4 | 26.99 |
| GSMUA_Achr2P07060_001 | Banana | nucleus | 30.21 | 26.64 |
| CDY51127 | Canola | nucleus | 29.45 | 26.32 |
| CDY36091 | Canola | nucleus | 29.64 | 25.96 |
| CDY55955 | Canola | nucleus | 29.45 | 25.84 |
| CDY20530 | Canola | nucleus | 29.64 | 25.75 |
| Os01t0111200-01 | Rice | nucleus | 30.02 | 25.32 |
| GSMUA_Achr9P00760_001 | Banana | nucleus | 29.06 | 25.29 |
| HORVU3Hr1G000880.1 | Barley | nucleus | 29.64 | 23.48 |
| TraesCS3A01G006100.1 | Wheat | nucleus | 29.64 | 23.38 |
| KRH39773 | Soybean | endoplasmic reticulum | 26.2 | 23.26 |
| Zm00001d008439_P001 | Maize | plasma membrane | 28.68 | 23.11 |
| TraesCS3D01G004500.1 | Wheat | plastid | 29.25 | 23.04 |
| EES02617 | Sorghum | nucleus, plastid | 29.06 | 22.96 |
| Zm00001d040142_P001 | Maize | nucleus, plastid | 28.3 | 22.87 |
| Zm00001d027310_P001 | Maize | nucleus, plastid | 12.62 | 21.15 |
Protein Annotations
| EnsemblPlants:CDY68331 | EnsemblPlantsGene:GSBRNA2T00073470001 | Gene3D:2.30.30.100 | InterPro:DFDF | InterPro:FDF_dom | InterPro:IPR025762 |
| InterPro:LSM_dom_sf | InterPro:Lsm14-like_N | PANTHER:PTHR13586 | PANTHER:PTHR13586:SF3 | PFAM:PF09532 | PFAM:PF12701 |
| PFscan:PS51512 | ProteinID:CDY68331 | ProteinID:CDY68331.1 | SEG:seg | SMART:SM01199 | SMART:SM01271 |
| SUPFAM:SSF50182 | UniParc:UPI0004EE5DF7 | UniProt:A0A078JRR6 | MapMan:35.1 | : | : |
Description
BnaAnng26910DBnaAnng26910D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JRR6]
Coordinates
chrLK037184:-:145..2917
Molecular Weight (calculated)
56347.9 Da
IEP (calculated)
6.765
GRAVY (calculated)
-0.711
Length
523 amino acids
Sequence
(BLAST)
(BLAST)
001: MASESSQSSS PSPSPSPSSL PSPSPGDTFV GSFISLVSKS EIRYEGILYH LNVHDSTLGL KNVRSCGTEG RKKDGPQVPP SDAVYDYILF RGSDIKDLQV
101: NPSPSAQSRK DIQSEKDINQ SSQSRPAVSS PPTGYDRGYG LGRGGQWVHS PALTSKPAPT TLHSPAPLGD GGSLTESPAS MPMPMPTPSF VQGNKLASTG
201: VPLGMMQHAV SSSSTKHNDQ AQIVDMFASP IMGLVDDTTK VVTHTPDVAS NLSYSSNPSP LGQAQHRTPP GLASSAPYIQ NTYPIAPQAV GKDVYDSQIN
301: HRNRSTPYTL PAVTSDSAPV IPDPLSSSPQ SFFGMELLQS NTASVGVPSR SLATTHQAPL LPLPVSAHQS WIPSSSAEFS EEFDFEAMND KFNKSELWGF
401: LGKNNQTNHT EKTAVEPSEE GKTKAAYKKD DFFDTISCNR LDRTARSGQQ QQHIQFPEHM RQDPQGFGNH FQRPLQPQPG QGAYLAAQTN YHGEYNNNNN
501: DYSNSGYGYY SGGGRGRGRN THF
101: NPSPSAQSRK DIQSEKDINQ SSQSRPAVSS PPTGYDRGYG LGRGGQWVHS PALTSKPAPT TLHSPAPLGD GGSLTESPAS MPMPMPTPSF VQGNKLASTG
201: VPLGMMQHAV SSSSTKHNDQ AQIVDMFASP IMGLVDDTTK VVTHTPDVAS NLSYSSNPSP LGQAQHRTPP GLASSAPYIQ NTYPIAPQAV GKDVYDSQIN
301: HRNRSTPYTL PAVTSDSAPV IPDPLSSSPQ SFFGMELLQS NTASVGVPSR SLATTHQAPL LPLPVSAHQS WIPSSSAEFS EEFDFEAMND KFNKSELWGF
401: LGKNNQTNHT EKTAVEPSEE GKTKAAYKKD DFFDTISCNR LDRTARSGQQ QQHIQFPEHM RQDPQGFGNH FQRPLQPQPG QGAYLAAQTN YHGEYNNNNN
501: DYSNSGYGYY SGGGRGRGRN THF
001: MASESSQSSS PSSSQPPSSV PSPSPGNNVG DTFIGSFISL ISKYEIRYEG ILYHLNVQDS TLGLKNVRSC GTEGRKKDGP QIPPCDKVYD YILFRGSDIK
101: DLQVNPSPSA QSRQEIQSEQ DVNQSPHSRP AMTMSSPISG YDSGYGLGRG SQWINTPALS SKPVPVTQHS SVPLSFQPPS ANAGSLTESP VSLIDSTQSN
201: AGSSMPIPSF VQGNKFASSG VPLGMMQKPV SSSSTIPNGP QIIDYFSSPI MGLVDDSSQV VTRSPDVSSN QSYSSNPSPL GQTQLHTPPG LASVSSNLSP
301: PSEAQLSAPN IQKIYPSAPQ AIGKVVYDPQ SNHPHRSIPH ELPAVASNSA PVIPGPLSKS PESFFDMDPS LQSRQQMVYR GQEMFAATNP ASANVPSQSF
401: APRNHAPLLP LPVSAHQSRI PSSSIEYTEE FDFEAMNEKF KKSELWGYLG RNNQRNQNDY GEETAIEPNA EGKPAYNKDD FFDTISCNQL DRVARSGQQH
501: NQFPEHMRQV PEAFGNNFQR PPPLQPGQGA YLAAQTNYRG GYHNNNNNNY YSNSGYGYYS GGRGRGRNTH F
101: DLQVNPSPSA QSRQEIQSEQ DVNQSPHSRP AMTMSSPISG YDSGYGLGRG SQWINTPALS SKPVPVTQHS SVPLSFQPPS ANAGSLTESP VSLIDSTQSN
201: AGSSMPIPSF VQGNKFASSG VPLGMMQKPV SSSSTIPNGP QIIDYFSSPI MGLVDDSSQV VTRSPDVSSN QSYSSNPSPL GQTQLHTPPG LASVSSNLSP
301: PSEAQLSAPN IQKIYPSAPQ AIGKVVYDPQ SNHPHRSIPH ELPAVASNSA PVIPGPLSKS PESFFDMDPS LQSRQQMVYR GQEMFAATNP ASANVPSQSF
401: APRNHAPLLP LPVSAHQSRI PSSSIEYTEE FDFEAMNEKF KKSELWGYLG RNNQRNQNDY GEETAIEPNA EGKPAYNKDD FFDTISCNQL DRVARSGQQH
501: NQFPEHMRQV PEAFGNNFQR PPPLQPGQGA YLAAQTNYRG GYHNNNNNNY YSNSGYGYYS GGRGRGRNTH F
Arabidopsis Description
DCP5-LDecapping 5-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q9FH77]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.