Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- mitochondrion 6
- nucleus 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d051566_P001 | Maize | nucleus | 7.14 | 34.44 |
| Solyc08g075300.2.1 | Tomato | nucleus, plastid | 20.51 | 28.08 |
| GSMUA_Achr1P20740_001 | Banana | nucleus | 31.57 | 23.26 |
| GSMUA_Achr2P07060_001 | Banana | nucleus | 31.11 | 22.77 |
| Solyc05g009980.2.1 | Tomato | nucleus | 31.34 | 22.7 |
| Os01t0111200-01 | Rice | nucleus | 30.88 | 21.61 |
| EES02617 | Sorghum | nucleus, plastid | 32.49 | 21.3 |
| GSMUA_Achr9P00760_001 | Banana | nucleus | 29.49 | 21.3 |
| Solyc06g069280.2.1 | Tomato | nucleus | 33.87 | 21.15 |
| Zm00001d040142_P001 | Maize | nucleus, plastid | 31.34 | 21.02 |
| Zm00001d008439_P001 | Maize | plasma membrane | 31.34 | 20.96 |
| HORVU3Hr1G000880.1 | Barley | nucleus | 30.41 | 20.0 |
| TraesCS3A01G006100.1 | Wheat | nucleus | 30.18 | 19.76 |
| TraesCS3D01G004500.1 | Wheat | plastid | 29.49 | 19.28 |
| Zm00001d027310_P001 | Maize | nucleus, plastid | 12.67 | 17.63 |
Protein Annotations
| EnsemblPlants:Solyc03g119850.1.1 | EnsemblPlantsGene:Solyc03g119850.1 | Gene3D:2.30.30.100 | InterPro:DFDF | InterPro:FDF_dom | InterPro:IPR025762 |
| InterPro:LSM_dom_sf | InterPro:Lsm14-like_N | PANTHER:PTHR13586 | PANTHER:PTHR13586:SF3 | PFAM:PF12701 | PFscan:PS51512 |
| SEG:seg | SMART:SM01199 | SMART:SM01271 | SUPFAM:SSF50182 | UniParc:UPI00027667BE | UniProt:K4BMD4 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr3:-:68403741..68407918
Molecular Weight (calculated)
48132.2 Da
IEP (calculated)
10.515
GRAVY (calculated)
-0.604
Length
434 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAPPIGIHQ RLALARTGEL RLGSLISVIS TSEMRYEGIL FEISNYRLGL KYVKFFGSEG RLKYGPQIPG KDRIYNFIYL RGANIKDLQV ISPPLPPTRS
101: AVPGHPAIIR PRFRHPTPTH MASTSHGASV RSSARPILRP GTSFQLNQPR PRDLSASTSS FRGSFLPPPP ANISRPRPAY WPGLIGSSRG VAYFHPPPSQ
201: APVQQQQNVN TSVAGGSSYY EHQHPLLLGH STGLSQTTNP SLLSGGQVTF CSPQVQQSGQ RQTVNIEEMT AIAPAMEALP SKSSEETLEK PKTETGSTSS
301: PHDKNQSAGG RDQKPRVIRR FVEDFDFEGM YKKFNKKEVW AIFSNSDDHK LPVYHKDEFF DYLSYGLPEH ESILTLSQQM KIDNETFGVE IPIVHIDHGN
401: RPRSSRTSQA SLGGRRYGNV RGGPGKKVWR RVSK
101: AVPGHPAIIR PRFRHPTPTH MASTSHGASV RSSARPILRP GTSFQLNQPR PRDLSASTSS FRGSFLPPPP ANISRPRPAY WPGLIGSSRG VAYFHPPPSQ
201: APVQQQQNVN TSVAGGSSYY EHQHPLLLGH STGLSQTTNP SLLSGGQVTF CSPQVQQSGQ RQTVNIEEMT AIAPAMEALP SKSSEETLEK PKTETGSTSS
301: PHDKNQSAGG RDQKPRVIRR FVEDFDFEGM YKKFNKKEVW AIFSNSDDHK LPVYHKDEFF DYLSYGLPEH ESILTLSQQM KIDNETFGVE IPIVHIDHGN
401: RPRSSRTSQA SLGGRRYGNV RGGPGKKVWR RVSK
001: MAADNTGSKS SSAADSYVGS LISLTSKSEI RYEGILYNIN TDESSIGLQN VRSFGTEGRK KDGPQVPPSD KVYEYILFRG TDIKDLQVKA SPPVQPPAST
101: INNDPAIIQS HYPSPMPTSG SLPSTASGSL PDISSHNGQP GQHGMGFQNA MPLYQPGGNL GSWGASPQPP MYWQGFYTPP PNGLPQLHQQ SLIRPPHGLP
201: MPNSLQQPLQ YPNFNTPPPP TGSSSLQGSS LPEAPSSLFP FSTSSQMLAP SSLPFPGLPP VTLSSSLQST LQSAPSPSLA SEMAPPLLSN KAPITAPPTL
301: PQDTNLLSFS LSTTRATEAS TGLPLSNKPS VVTGPISPPQ TTPLTSAPVA GVSSSISQDK PKPLLVTPGQ LLQSGSSAVS LSPPSTNADK DVEVVQVSSS
401: AGLEQSVPVT SEAQPPILPL PSSARPTQKM HENLSGGRGR GRGRGAGRSH QVMKFTEDFD FTAMNEKFNK DEVWGHLGKS TTLDGDEDDD SPTVDEAELP
501: KIEAKPVYNK DDFFDSLSSN TIDRESQNSR PRFSEQRKLD TETFGEFSRF RGGRGGRGGY GRNNGYSRGG YGGRGYGGYG GRGGGGGGYG YGGRGQGRGV
601: SNRTT
101: INNDPAIIQS HYPSPMPTSG SLPSTASGSL PDISSHNGQP GQHGMGFQNA MPLYQPGGNL GSWGASPQPP MYWQGFYTPP PNGLPQLHQQ SLIRPPHGLP
201: MPNSLQQPLQ YPNFNTPPPP TGSSSLQGSS LPEAPSSLFP FSTSSQMLAP SSLPFPGLPP VTLSSSLQST LQSAPSPSLA SEMAPPLLSN KAPITAPPTL
301: PQDTNLLSFS LSTTRATEAS TGLPLSNKPS VVTGPISPPQ TTPLTSAPVA GVSSSISQDK PKPLLVTPGQ LLQSGSSAVS LSPPSTNADK DVEVVQVSSS
401: AGLEQSVPVT SEAQPPILPL PSSARPTQKM HENLSGGRGR GRGRGAGRSH QVMKFTEDFD FTAMNEKFNK DEVWGHLGKS TTLDGDEDDD SPTVDEAELP
501: KIEAKPVYNK DDFFDSLSSN TIDRESQNSR PRFSEQRKLD TETFGEFSRF RGGRGGRGGY GRNNGYSRGG YGGRGYGGYG GRGGGGGGYG YGGRGQGRGV
601: SNRTT
Arabidopsis Description
DCP5Protein decapping 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9C658]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.