Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc06g069280.2.1 | Tomato | nucleus | 91.3 | 90.65 |
| Zm00001d051566_P001 | Maize | nucleus | 5.36 | 41.11 |
| GSMUA_Achr1P20740_001 | Banana | nucleus | 30.29 | 35.48 |
| PGSC0003DMT400002103 | Potato | nucleus | 30.58 | 35.28 |
| GSMUA_Achr2P07060_001 | Banana | nucleus | 28.55 | 33.22 |
| GSMUA_Achr9P00760_001 | Banana | nucleus | 28.12 | 32.28 |
| Os01t0111200-01 | Rice | nucleus | 27.39 | 30.48 |
| Zm00001d040142_P001 | Maize | nucleus, plastid | 27.1 | 28.9 |
| Zm00001d008439_P001 | Maize | plasma membrane | 26.96 | 28.66 |
| TraesCS3A01G006100.1 | Wheat | nucleus | 27.1 | 28.21 |
| HORVU3Hr1G000880.1 | Barley | nucleus | 26.96 | 28.18 |
| EES02617 | Sorghum | nucleus, plastid | 26.96 | 28.1 |
| TraesCS3D01G004500.1 | Wheat | plastid | 26.67 | 27.71 |
| Zm00001d027310_P001 | Maize | nucleus, plastid | 11.01 | 24.36 |
Protein Annotations
| EntrezGene:102599513 | Gene3D:2.30.30.100 | MapMan:35.1 | InterPro:DFDF | InterPro:FDF_dom | InterPro:IPR025762 |
| InterPro:LSM_dom_sf | InterPro:Lsm14-like_N | UniProt:M0ZY15 | PFAM:PF09532 | PFAM:PF12701 | EnsemblPlantsGene:PGSC0003DMG400004074 |
| PGSC:PGSC0003DMG400004074 | EnsemblPlants:PGSC0003DMT400010431 | PFscan:PS51512 | PANTHER:PTHR13586 | PANTHER:PTHR13586:SF0 | SMART:SM01199 |
| SMART:SM01271 | SUPFAM:SSF50182 | UniParc:UPI000294B53E | RefSeq:XP_015167502.1 | RefSeq:XP_015167503.1 | RefSeq:XP_015167504.1 |
| SEG:seg | : | : | : | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400004074]
Coordinates
chr6:-:51026575..51035954
Molecular Weight (calculated)
74218.3 Da
IEP (calculated)
8.923
GRAVY (calculated)
-0.652
Length
690 amino acids
Sequence
(BLAST)
(BLAST)
001: MATAASKAAD SYIGSLICLI TKSDIRYEGF LFHLDAAEST IGLRNVKSYG SEGRKKDGPQ ISPSDKIYEY IFFRGSDIKD LQVISSPSPQ STAVVPDDPA
101: IIQTHFPNPT PPTIGMTSPG AAQVADVSTS APSMLPVAPF LLNLPPNPLL PSSNLWGSSL PPPPVNISGP AVPNYWPGLV GSSGGISHYQ QQRFPPPPQS
201: LVASLPIQQQ AQHQNVNALA GGSSLASQHH PLLLPISTTS PNLLPAVPSL SGQSNPRQPA KPAFNLLSIP MPNDAFRTLS TVAVDSCPRT VSSLEAELNA
301: NANLAPVRKE SSSVISTSGS FPTFSQTVSS IVDTKGASHS NLSRLSLLTP EVQSGVKDSS SCRSMQNPNC DVYTGQASVA EPLPSGSTEE TLESLPKSPT
401: KILRGSTSSH HNRSYYAQGR DGAHQDTSST HHNSRGPAHR GNAPNGGPVY AQQSYRKHAS GRGNGLIGAA LHSRQSNMGM GRGKVPNGIP QHNHHNTGIQ
501: FRDGVPQHNH CNTGIQFRDG VPQHNHRNTG SHFRGRGAKN PLVAKRFSED FDFEAMNEKF NKKEVWDFLG RSNKAESDEG IRDEKEMDES DVEDATGDGS
601: AKHDNKPVYC KEDFFDSLSC HALDRESGKV KFSDQRKKDV ETFGEIQKNQ WGRGQGARMS GGFQQSYRGR GYDNARGGRG QGRTVWGRVT
101: IIQTHFPNPT PPTIGMTSPG AAQVADVSTS APSMLPVAPF LLNLPPNPLL PSSNLWGSSL PPPPVNISGP AVPNYWPGLV GSSGGISHYQ QQRFPPPPQS
201: LVASLPIQQQ AQHQNVNALA GGSSLASQHH PLLLPISTTS PNLLPAVPSL SGQSNPRQPA KPAFNLLSIP MPNDAFRTLS TVAVDSCPRT VSSLEAELNA
301: NANLAPVRKE SSSVISTSGS FPTFSQTVSS IVDTKGASHS NLSRLSLLTP EVQSGVKDSS SCRSMQNPNC DVYTGQASVA EPLPSGSTEE TLESLPKSPT
401: KILRGSTSSH HNRSYYAQGR DGAHQDTSST HHNSRGPAHR GNAPNGGPVY AQQSYRKHAS GRGNGLIGAA LHSRQSNMGM GRGKVPNGIP QHNHHNTGIQ
501: FRDGVPQHNH CNTGIQFRDG VPQHNHRNTG SHFRGRGAKN PLVAKRFSED FDFEAMNEKF NKKEVWDFLG RSNKAESDEG IRDEKEMDES DVEDATGDGS
601: AKHDNKPVYC KEDFFDSLSC HALDRESGKV KFSDQRKKDV ETFGEIQKNQ WGRGQGARMS GGFQQSYRGR GYDNARGGRG QGRTVWGRVT
001: MAADNTGSKS SSAADSYVGS LISLTSKSEI RYEGILYNIN TDESSIGLQN VRSFGTEGRK KDGPQVPPSD KVYEYILFRG TDIKDLQVKA SPPVQPPAST
101: INNDPAIIQS HYPSPMPTSG SLPSTASGSL PDISSHNGQP GQHGMGFQNA MPLYQPGGNL GSWGASPQPP MYWQGFYTPP PNGLPQLHQQ SLIRPPHGLP
201: MPNSLQQPLQ YPNFNTPPPP TGSSSLQGSS LPEAPSSLFP FSTSSQMLAP SSLPFPGLPP VTLSSSLQST LQSAPSPSLA SEMAPPLLSN KAPITAPPTL
301: PQDTNLLSFS LSTTRATEAS TGLPLSNKPS VVTGPISPPQ TTPLTSAPVA GVSSSISQDK PKPLLVTPGQ LLQSGSSAVS LSPPSTNADK DVEVVQVSSS
401: AGLEQSVPVT SEAQPPILPL PSSARPTQKM HENLSGGRGR GRGRGAGRSH QVMKFTEDFD FTAMNEKFNK DEVWGHLGKS TTLDGDEDDD SPTVDEAELP
501: KIEAKPVYNK DDFFDSLSSN TIDRESQNSR PRFSEQRKLD TETFGEFSRF RGGRGGRGGY GRNNGYSRGG YGGRGYGGYG GRGGGGGGYG YGGRGQGRGV
601: SNRTT
101: INNDPAIIQS HYPSPMPTSG SLPSTASGSL PDISSHNGQP GQHGMGFQNA MPLYQPGGNL GSWGASPQPP MYWQGFYTPP PNGLPQLHQQ SLIRPPHGLP
201: MPNSLQQPLQ YPNFNTPPPP TGSSSLQGSS LPEAPSSLFP FSTSSQMLAP SSLPFPGLPP VTLSSSLQST LQSAPSPSLA SEMAPPLLSN KAPITAPPTL
301: PQDTNLLSFS LSTTRATEAS TGLPLSNKPS VVTGPISPPQ TTPLTSAPVA GVSSSISQDK PKPLLVTPGQ LLQSGSSAVS LSPPSTNADK DVEVVQVSSS
401: AGLEQSVPVT SEAQPPILPL PSSARPTQKM HENLSGGRGR GRGRGAGRSH QVMKFTEDFD FTAMNEKFNK DEVWGHLGKS TTLDGDEDDD SPTVDEAELP
501: KIEAKPVYNK DDFFDSLSSN TIDRESQNSR PRFSEQRKLD TETFGEFSRF RGGRGGRGGY GRNNGYSRGG YGGRGYGGYG GRGGGGGGYG YGGRGQGRGV
601: SNRTT
Arabidopsis Description
DCP5Protein decapping 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9C658]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.