Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 3
- cytosol 1
- plastid 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G321900.2 | Wheat | cytosol | 57.82 | 53.97 |
| TraesCS7B01G222800.1 | Wheat | cytosol | 57.35 | 53.52 |
| TraesCS7D01G318800.4 | Wheat | plastid | 57.89 | 51.45 |
| KRH03942 | Soybean | cytosol | 27.07 | 34.1 |
| GSMUA_Achr10P... | Banana | plasma membrane | 38.23 | 33.43 |
| Solyc03g083130.1.1 | Tomato | cytosol | 29.32 | 32.73 |
| VIT_16s0098g01810.t01 | Wine grape | cytosol | 35.92 | 30.28 |
| KXG31464 | Sorghum | cytosol | 6.8 | 24.69 |
Protein Annotations
| EnsemblPlants:OQU84844 | EnsemblPlantsGene:SORBI_3004G132100 | Gene3D:3.30.565.10 | InterPro:HATPase_C_sf | InterPro:IPR036890 | ncoils:Coil |
| PANTHER:PTHR33566 | PANTHER:PTHR33566:SF3 | PFAM:PF13589 | ProteinID:OQU84844 | ProteinID:OQU84844.1 | SEG:seg |
| SUPFAM:SSF55874 | TMHMM:TMhelix | UniParc:UPI000B8B9665 | UniProt:A0A1Z5RM78 | MapMan:35.1 | : |
Description
hypothetical protein
Coordinates
chr4:-:19667362..19718711
Molecular Weight (calculated)
165230.0 Da
IEP (calculated)
6.493
GRAVY (calculated)
-0.333
Length
1470 amino acids
Sequence
(BLAST)
(BLAST)
0001: MANASNVYRF QVLLPSGLSS MLTFHNPGYE ISVSDLLLKV KGELGNTQWD VNGKVYLTDL LDRIITDKIK LSNFDTKSVN ILKLHNMWDL TPQTDLLEEL
0101: PAEYSTESAL ADLTDNALQA LWSNGHGERK LIKITLDKEK IVIFDTGRGM DGSDGNSISK WGTMGSSNHR VFRRKGIGQK APYLVPFFGM FGYGGTIASM
0201: HLGRIAIVSS KTKESKKVFT LHLSKEALLK NPSSKNSEHT WKTAGGLRDP SKEEILLSPH QSFTQYDEDS EWRNTRNPVE FEVNGVNLSE VPEGEVTVTN
0301: MHSSNGPDFI VHMKFTQKAT ASCIAHARLR CVYFPIIQLR FEGCEIKENF DNFSRVSIRR LGRLLPDARW GSLPFMVPKQ KKGQKAEFFR RCCKRVKCFV
0401: ETDAGLYPTR SKTDLAQHDP FTKALRNWGS NYLNSSSAEE VDIEAHGKDG KLLSHKQFEK QYYDWITEMH EKYDAEMDGG DDEPTLIINP SCKERLGISI
0501: DVEVVRVHTS ISRRGQTWRR GDHLKILKGA IGQVKTSFYT LKNSLCTTLE YIVVEGLQGD ICGEARLICR PIEYPDGQGC YISKAEDTSP DIYIQESVSF
0601: PCKIMDDGSW NQMLKKRKEK APASIEVIRN IHGLGGDLPY EDVMAGYQQP HEIIAVLRPG NYKPSSTNLP DQKNIVKDDD LEMVMEVRYL MSKDGPAKLI
0701: HKRVKPSSHN DIDGLYVFPL RGDSLIFSKS GVYQFIFSVF DKNRYYRVGC PIRCLAVRSH DKYGNRIPFL DTSSVIATIL YGDDVLAQVD NIEVELSSDS
0801: LTLNIMDFRF KTSNLDLLRP KYEAKLKISS SADEFSGICR CEVKPGHPST INIDMSLFPE KNLTPGRLID NFFLEVFDQF SNHVEEETKL NVHVDGMCFL
0901: DKQFSVQKVN STGFIDLCGK LRVVWGFGSE ACITIFHNDK EIFTKIFQIA TRELKAVNVP ESCRAGSFLE NITFEVYDSD GLIDESIDGP LHTLNITSNE
1001: LALVEGAQYA IKHGRCVLSR VQLPHEQGTV TIMAYHTYYP DDLHIEIQLQ VQSFDLALTT LEDGSEPILS CPISFIECSN LSLPSQLAPG QPSHLITYVK
1101: DVVKKTKNKV GDTLSKIKST EETLKSLCSR KGSLEKQIDT IKDEIRFMVG SFIDAKELVR DKIRENIGTA ACVVCSSGDF FVDDVVGIVA LLGTVPDGKI
1201: SRMLAVYLGK DDMLSVVCKT QEAANYIEKY NTDGGVDVDF GIHREASALG VPIKRRFAII CLEDIEPYKG GVLLNSPQKE LNLAWPSPHA SKPKGFRGFA
1301: VNMINLSDDN LNITTSRGHG LRETLFYSLF GELQVYETRN DMLQAMPYLN GGAISLDGGV MKGKGKLLLG YSDPKITFPV VSGLPNTITS ESNDHLDVVT
1401: RTRNLDSKMK LLEVIETKIS EQKRLHEELV KEFNKRKRKF EEIEERITQP CGNELVLRDL QQVKVEEPDP
0101: PAEYSTESAL ADLTDNALQA LWSNGHGERK LIKITLDKEK IVIFDTGRGM DGSDGNSISK WGTMGSSNHR VFRRKGIGQK APYLVPFFGM FGYGGTIASM
0201: HLGRIAIVSS KTKESKKVFT LHLSKEALLK NPSSKNSEHT WKTAGGLRDP SKEEILLSPH QSFTQYDEDS EWRNTRNPVE FEVNGVNLSE VPEGEVTVTN
0301: MHSSNGPDFI VHMKFTQKAT ASCIAHARLR CVYFPIIQLR FEGCEIKENF DNFSRVSIRR LGRLLPDARW GSLPFMVPKQ KKGQKAEFFR RCCKRVKCFV
0401: ETDAGLYPTR SKTDLAQHDP FTKALRNWGS NYLNSSSAEE VDIEAHGKDG KLLSHKQFEK QYYDWITEMH EKYDAEMDGG DDEPTLIINP SCKERLGISI
0501: DVEVVRVHTS ISRRGQTWRR GDHLKILKGA IGQVKTSFYT LKNSLCTTLE YIVVEGLQGD ICGEARLICR PIEYPDGQGC YISKAEDTSP DIYIQESVSF
0601: PCKIMDDGSW NQMLKKRKEK APASIEVIRN IHGLGGDLPY EDVMAGYQQP HEIIAVLRPG NYKPSSTNLP DQKNIVKDDD LEMVMEVRYL MSKDGPAKLI
0701: HKRVKPSSHN DIDGLYVFPL RGDSLIFSKS GVYQFIFSVF DKNRYYRVGC PIRCLAVRSH DKYGNRIPFL DTSSVIATIL YGDDVLAQVD NIEVELSSDS
0801: LTLNIMDFRF KTSNLDLLRP KYEAKLKISS SADEFSGICR CEVKPGHPST INIDMSLFPE KNLTPGRLID NFFLEVFDQF SNHVEEETKL NVHVDGMCFL
0901: DKQFSVQKVN STGFIDLCGK LRVVWGFGSE ACITIFHNDK EIFTKIFQIA TRELKAVNVP ESCRAGSFLE NITFEVYDSD GLIDESIDGP LHTLNITSNE
1001: LALVEGAQYA IKHGRCVLSR VQLPHEQGTV TIMAYHTYYP DDLHIEIQLQ VQSFDLALTT LEDGSEPILS CPISFIECSN LSLPSQLAPG QPSHLITYVK
1101: DVVKKTKNKV GDTLSKIKST EETLKSLCSR KGSLEKQIDT IKDEIRFMVG SFIDAKELVR DKIRENIGTA ACVVCSSGDF FVDDVVGIVA LLGTVPDGKI
1201: SRMLAVYLGK DDMLSVVCKT QEAANYIEKY NTDGGVDVDF GIHREASALG VPIKRRFAII CLEDIEPYKG GVLLNSPQKE LNLAWPSPHA SKPKGFRGFA
1301: VNMINLSDDN LNITTSRGHG LRETLFYSLF GELQVYETRN DMLQAMPYLN GGAISLDGGV MKGKGKLLLG YSDPKITFPV VSGLPNTITS ESNDHLDVVT
1401: RTRNLDSKMK LLEVIETKIS EQKRLHEELV KEFNKRKRKF EEIEERITQP CGNELVLRDL QQVKVEEPDP
0001: MSSRRSVKRS LVLDDDDDED IFYNFKVLLP NGTSVKLTLK NPEPEISMQS FVNLVKKEYD NARKDCLLMS KRMKVDWNSG GKFHLESNGG KMKGIVRFAA
0101: FKPDLCHIIR LDDGSGIAST MYENLWDLTP DTDLLKELPE NYSFETALAD LIDNSLQAVW PYREGARKLI SVDISGDHIT VFDTGRGMDS SEGNSIDKWG
0201: KIGASLHRSQ KTGAIGGNPP YLKPYFGMFG YGGPYASMFL GRRTLVSSKT KESKKVFTLQ FKKEALIDNR SIVGKNWKTD GGMRDPSEEE MKLSPHGSFT
0301: KVEIFESEFD ISKIYQLQCR LKDIYFPYIQ CDELSKTGRT ERPVAFQVNG EDLAEIAGGE VAITNLHSKG QFFSFQIRFT LFGGKRKGTA QEANARLKFV
0401: YFPIVQGKES IEKILQSLEE EGCKVSESFQ TFGRVSLRRL GRLLPEVRWD SIPFMQRGNR ASTLQKSCRR VKCFVDLDAG FSPTPSKTDL ASQNPFSVAL
0501: RNFGSKSTEK EKDDDVNIVI HREGKSVSYA HLEEKYQEWV LEMHNTHDEE AASGLDEAVL IVGSLDKKAL GILRDAVRVH KEVRRKEKTW KRGQNIKILR
0601: GAYAGIHNNN VYATIDYFLI EGFEDEAGGD TRILCRPIDR PENEGCKLSI IDGISKLEVQ SSLSLPITII DSGKCLPVDA NEWNRKLDKQ QEKAPSKIDL
0701: LDERDCRELK IDGELPIGNS VRAGKAPPKQ IVAVVRPACF TSLTPSKKLD QKNIVKMDGE EMVMVVKLKS SDKNISSQRL FPTSRKGISG LYIFSLGSKF
0801: PNLFKKAGTY NFSFSIGNSI KCNKTVVVRP SSKAARWELD DNLESLPCNV RVGSSLPPFR IACFDKYKNK IPFTSVPSLE VELEASPGFL IKIDKLETNL
0901: INDGLILKIE NMLVETDELD QIRPNYEATL EIRAMDNPFS VSVPCKVNPG PLKRVAVNNP KALENLLPDS TVEDFILELF DGYNNHVAEG TDVLIHIDGY
1001: RIEDWMGINR KVDSRGCINL SGILKVTEGY GKSVSLSVMS GNEVIFCKES QIDERQLRLV TELPDCCTAG TNLMNLIFQV TELDGSLDTS IHHDEKSGCF
1101: HTMSIESDSS SVESAIRYAF VHGSCKVSSL SLPENEGVFS CRVFHSRYPE LQMSIKIQVT SAPTSEREES GYSTPHSKTT PPPESGIPSI TNPWPTPCSQ
1201: FGVLAIRSSS LALSSETSLM DMAQYTEDLK EKINIDEERR VELEERLKCL QAQREHAEQE CSRLQASLEP LGAPFPECLS TKESMMKQIE EKHHDTAASV
1301: FCCLYRKAPP PRSLFLSQKG MFGVVALLGS VASTSLSRVL SEYLGKDTML SLVCKSSQFG PKSDEYRKFQ SEAASLGRSI TNRFLVICLD ATRPWRNGLV
1401: RNDPQKRLAM DNPYLPNGDP IPGFKGYAVN MIDLASEELD IQSSSGYGLR ETLFYGVFRE LQVYETAEHL EAALPHINGG DAVSLDGVIA RENGFIYSGC
1501: CTPEVHFPIT VTERQEKALV QLEITRDKKR KTEEMMTEEN RSLRRLVKKL KKANEKYQNF TAMADS
0101: FKPDLCHIIR LDDGSGIAST MYENLWDLTP DTDLLKELPE NYSFETALAD LIDNSLQAVW PYREGARKLI SVDISGDHIT VFDTGRGMDS SEGNSIDKWG
0201: KIGASLHRSQ KTGAIGGNPP YLKPYFGMFG YGGPYASMFL GRRTLVSSKT KESKKVFTLQ FKKEALIDNR SIVGKNWKTD GGMRDPSEEE MKLSPHGSFT
0301: KVEIFESEFD ISKIYQLQCR LKDIYFPYIQ CDELSKTGRT ERPVAFQVNG EDLAEIAGGE VAITNLHSKG QFFSFQIRFT LFGGKRKGTA QEANARLKFV
0401: YFPIVQGKES IEKILQSLEE EGCKVSESFQ TFGRVSLRRL GRLLPEVRWD SIPFMQRGNR ASTLQKSCRR VKCFVDLDAG FSPTPSKTDL ASQNPFSVAL
0501: RNFGSKSTEK EKDDDVNIVI HREGKSVSYA HLEEKYQEWV LEMHNTHDEE AASGLDEAVL IVGSLDKKAL GILRDAVRVH KEVRRKEKTW KRGQNIKILR
0601: GAYAGIHNNN VYATIDYFLI EGFEDEAGGD TRILCRPIDR PENEGCKLSI IDGISKLEVQ SSLSLPITII DSGKCLPVDA NEWNRKLDKQ QEKAPSKIDL
0701: LDERDCRELK IDGELPIGNS VRAGKAPPKQ IVAVVRPACF TSLTPSKKLD QKNIVKMDGE EMVMVVKLKS SDKNISSQRL FPTSRKGISG LYIFSLGSKF
0801: PNLFKKAGTY NFSFSIGNSI KCNKTVVVRP SSKAARWELD DNLESLPCNV RVGSSLPPFR IACFDKYKNK IPFTSVPSLE VELEASPGFL IKIDKLETNL
0901: INDGLILKIE NMLVETDELD QIRPNYEATL EIRAMDNPFS VSVPCKVNPG PLKRVAVNNP KALENLLPDS TVEDFILELF DGYNNHVAEG TDVLIHIDGY
1001: RIEDWMGINR KVDSRGCINL SGILKVTEGY GKSVSLSVMS GNEVIFCKES QIDERQLRLV TELPDCCTAG TNLMNLIFQV TELDGSLDTS IHHDEKSGCF
1101: HTMSIESDSS SVESAIRYAF VHGSCKVSSL SLPENEGVFS CRVFHSRYPE LQMSIKIQVT SAPTSEREES GYSTPHSKTT PPPESGIPSI TNPWPTPCSQ
1201: FGVLAIRSSS LALSSETSLM DMAQYTEDLK EKINIDEERR VELEERLKCL QAQREHAEQE CSRLQASLEP LGAPFPECLS TKESMMKQIE EKHHDTAASV
1301: FCCLYRKAPP PRSLFLSQKG MFGVVALLGS VASTSLSRVL SEYLGKDTML SLVCKSSQFG PKSDEYRKFQ SEAASLGRSI TNRFLVICLD ATRPWRNGLV
1401: RNDPQKRLAM DNPYLPNGDP IPGFKGYAVN MIDLASEELD IQSSSGYGLR ETLFYGVFRE LQVYETAEHL EAALPHINGG DAVSLDGVIA RENGFIYSGC
1501: CTPEVHFPIT VTERQEKALV QLEITRDKKR KTEEMMTEEN RSLRRLVKKL KKANEKYQNF TAMADS
Arabidopsis Description
GMI1Structural maintenance of chromosomes flexible hinge domain-containing protein GMI1 [Source:UniProtKB/Swiss-Prot;Acc:F4KFS5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.