Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g071800.1.1 | Tomato | cytosol | 5.39 | 43.83 |
| Solyc03g071820.1.1 | Tomato | cytosol | 4.63 | 40.13 |
| Solyc11g032150.1.1 | Tomato | cytosol, extracellular, nucleus | 2.13 | 38.89 |
| VIT_16s0098g01810.t01 | Wine grape | cytosol | 47.68 | 36.01 |
| Solyc03g071790.1.1 | Tomato | cytosol | 5.92 | 33.48 |
| KRH03942 | Soybean | cytosol | 29.54 | 33.33 |
| Solyc11g032160.1.1 | Tomato | endoplasmic reticulum, extracellular | 3.49 | 32.86 |
| GSMUA_Achr10P... | Banana | plasma membrane | 39.64 | 31.05 |
| OQU84844 | Sorghum | cytosol, mitochondrion, peroxisome, plastid | 32.73 | 29.32 |
| TraesCS7B01G222800.1 | Wheat | cytosol | 34.85 | 29.14 |
| TraesCS7A01G321900.2 | Wheat | cytosol | 34.32 | 28.7 |
| TraesCS7D01G318800.4 | Wheat | plastid | 34.32 | 27.33 |
| Solyc03g083210.2.1 | Tomato | cytosol, nucleus | 9.04 | 27.23 |
| Solyc06g051990.2.1 | Tomato | cytosol | 8.73 | 24.63 |
| Solyc03g083170.2.1 | Tomato | cytosol | 9.04 | 15.3 |
Protein Annotations
| EnsemblPlants:Solyc03g083130.1.1 | EnsemblPlantsGene:Solyc03g083130.1 | ncoils:Coil | PANTHER:PTHR33566 | PANTHER:PTHR33566:SF3 | SEG:seg |
| UniParc:UPI000276892E | UniProt:K4BI89 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr3:+:52942712..52961030
Molecular Weight (calculated)
147817.0 Da
IEP (calculated)
6.852
GRAVY (calculated)
-0.319
Length
1317 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDGSAENSIV KWGKMGASIH RSARDRGIGG KPPYLTPYFG MFGYGGPIAS MHLGRRCDEV SKTGKTVMPI EFQVNGTNLA EIEGGEVATT NLLSCNGPEF
0101: VMQLSFQVKD SSGLKVGSGT KSSFEAHARL RCVYFPVAQG KESIEVILEK LEADGYGITE NFETFSHVSV RRLGRLLPDA RWSWLPFMEP KLRKSDRAEV
0201: LKRCCFRVKC FIETDAGFNP TPSKTDLAHH HPFTIALRNF GNKPSNKEND VLIEIAKDGK KLSLLQLEKL YQEWLFQMHD RYDEEIDCGE DQPTFVVVGP
0301: LHKKKLGVSA DVMRIHKAFQ RKGITWKAGQ KIKILKGAYR GFHKNNIFAT LEFIILEGWQ GDSGGEARII CRPLNVPAES GCRLTFDKGC SCFEIRDSKS
0401: LPISVIDTGK CLSVDKTEWE NQILKHQEKT TPSSIDILDA EQCLELEIEG ALPQDVDAGH EPPEEITAVV RPVSFTSATA SKNLDQKYIM KENFVMTLEI
0501: KFKADENEKE QHIYSGKLNP SSLKGFHGLY MFPLKKKSPN LFQTAGIYLF RFSLIESCTI SVKEVRVKAL SEPASWELVS DGKSTHSVRV GSCLPEVFSV
0601: ACRDRFFNRI PFKSQTEIEM KLSSGGRAIS SECSYDQYIT HDSYTMKFKN VTIESSELDM IRPSYNATLH INSREDPFVV AIPCAVIPGP LQRILLRPVD
0701: FGKKLVPGMV LKELALETFD KYGNHMRKDE HIKLTLEGLH LLDKGNSFYK VDDHGCVNLS GTLKVTAGYG KLVSLSVLSG DEVVFKKEFQ TDRRSLRVAS
0801: KVPKVCAAGS HLEDVVFEVV NSAGEVDEDI DSEIEDGHSH TLQIRQDSLR EEDNVRYSFH RGRCIVRSIP LPNNEGLFFF VASHSRFHEL QTSIEVHVEK
0901: AVIQPRSPKK EILLLEESNG KGPETVCHDS YDGRIMIFND SCASMVLEDR QQKLGDDICR YGLCIRQCDA NVESLSIKQS NIELEMSNLG AYIGLDSFHD
1001: LFYDKDVIME KIEGKADSAA AVIHKLLRSP KPEQLYLKYA HDILGVVALL GEVRTHKLSS MLSTYLGEDQ MLAIVCKSRA AARALENYQM DGNVNCGSAL
1101: DILAAKLGIS IKGRYLVICL EDIRPYKQGV SSDPQRELAI PQPTLSNRET PPGFLGYAVN MIFLPAEYLQ FRTASGYGLR ETLFYRLLGK LQVYKSREQL
1201: YMASSCIEDG AVSLDGGMMR GNGVISASVG SEEPYILFPV ICVERQLLLS PEKVERLKRI EELKLERNQL QDRIQEELRN EAKYKKKLAK KLMDKKQIDD
1301: QLEPSPGMYN SDMDISP
0101: VMQLSFQVKD SSGLKVGSGT KSSFEAHARL RCVYFPVAQG KESIEVILEK LEADGYGITE NFETFSHVSV RRLGRLLPDA RWSWLPFMEP KLRKSDRAEV
0201: LKRCCFRVKC FIETDAGFNP TPSKTDLAHH HPFTIALRNF GNKPSNKEND VLIEIAKDGK KLSLLQLEKL YQEWLFQMHD RYDEEIDCGE DQPTFVVVGP
0301: LHKKKLGVSA DVMRIHKAFQ RKGITWKAGQ KIKILKGAYR GFHKNNIFAT LEFIILEGWQ GDSGGEARII CRPLNVPAES GCRLTFDKGC SCFEIRDSKS
0401: LPISVIDTGK CLSVDKTEWE NQILKHQEKT TPSSIDILDA EQCLELEIEG ALPQDVDAGH EPPEEITAVV RPVSFTSATA SKNLDQKYIM KENFVMTLEI
0501: KFKADENEKE QHIYSGKLNP SSLKGFHGLY MFPLKKKSPN LFQTAGIYLF RFSLIESCTI SVKEVRVKAL SEPASWELVS DGKSTHSVRV GSCLPEVFSV
0601: ACRDRFFNRI PFKSQTEIEM KLSSGGRAIS SECSYDQYIT HDSYTMKFKN VTIESSELDM IRPSYNATLH INSREDPFVV AIPCAVIPGP LQRILLRPVD
0701: FGKKLVPGMV LKELALETFD KYGNHMRKDE HIKLTLEGLH LLDKGNSFYK VDDHGCVNLS GTLKVTAGYG KLVSLSVLSG DEVVFKKEFQ TDRRSLRVAS
0801: KVPKVCAAGS HLEDVVFEVV NSAGEVDEDI DSEIEDGHSH TLQIRQDSLR EEDNVRYSFH RGRCIVRSIP LPNNEGLFFF VASHSRFHEL QTSIEVHVEK
0901: AVIQPRSPKK EILLLEESNG KGPETVCHDS YDGRIMIFND SCASMVLEDR QQKLGDDICR YGLCIRQCDA NVESLSIKQS NIELEMSNLG AYIGLDSFHD
1001: LFYDKDVIME KIEGKADSAA AVIHKLLRSP KPEQLYLKYA HDILGVVALL GEVRTHKLSS MLSTYLGEDQ MLAIVCKSRA AARALENYQM DGNVNCGSAL
1101: DILAAKLGIS IKGRYLVICL EDIRPYKQGV SSDPQRELAI PQPTLSNRET PPGFLGYAVN MIFLPAEYLQ FRTASGYGLR ETLFYRLLGK LQVYKSREQL
1201: YMASSCIEDG AVSLDGGMMR GNGVISASVG SEEPYILFPV ICVERQLLLS PEKVERLKRI EELKLERNQL QDRIQEELRN EAKYKKKLAK KLMDKKQIDD
1301: QLEPSPGMYN SDMDISP
0001: MSSRRSVKRS LVLDDDDDED IFYNFKVLLP NGTSVKLTLK NPEPEISMQS FVNLVKKEYD NARKDCLLMS KRMKVDWNSG GKFHLESNGG KMKGIVRFAA
0101: FKPDLCHIIR LDDGSGIAST MYENLWDLTP DTDLLKELPE NYSFETALAD LIDNSLQAVW PYREGARKLI SVDISGDHIT VFDTGRGMDS SEGNSIDKWG
0201: KIGASLHRSQ KTGAIGGNPP YLKPYFGMFG YGGPYASMFL GRRTLVSSKT KESKKVFTLQ FKKEALIDNR SIVGKNWKTD GGMRDPSEEE MKLSPHGSFT
0301: KVEIFESEFD ISKIYQLQCR LKDIYFPYIQ CDELSKTGRT ERPVAFQVNG EDLAEIAGGE VAITNLHSKG QFFSFQIRFT LFGGKRKGTA QEANARLKFV
0401: YFPIVQGKES IEKILQSLEE EGCKVSESFQ TFGRVSLRRL GRLLPEVRWD SIPFMQRGNR ASTLQKSCRR VKCFVDLDAG FSPTPSKTDL ASQNPFSVAL
0501: RNFGSKSTEK EKDDDVNIVI HREGKSVSYA HLEEKYQEWV LEMHNTHDEE AASGLDEAVL IVGSLDKKAL GILRDAVRVH KEVRRKEKTW KRGQNIKILR
0601: GAYAGIHNNN VYATIDYFLI EGFEDEAGGD TRILCRPIDR PENEGCKLSI IDGISKLEVQ SSLSLPITII DSGKCLPVDA NEWNRKLDKQ QEKAPSKIDL
0701: LDERDCRELK IDGELPIGNS VRAGKAPPKQ IVAVVRPACF TSLTPSKKLD QKNIVKMDGE EMVMVVKLKS SDKNISSQRL FPTSRKGISG LYIFSLGSKF
0801: PNLFKKAGTY NFSFSIGNSI KCNKTVVVRP SSKAARWELD DNLESLPCNV RVGSSLPPFR IACFDKYKNK IPFTSVPSLE VELEASPGFL IKIDKLETNL
0901: INDGLILKIE NMLVETDELD QIRPNYEATL EIRAMDNPFS VSVPCKVNPG PLKRVAVNNP KALENLLPDS TVEDFILELF DGYNNHVAEG TDVLIHIDGY
1001: RIEDWMGINR KVDSRGCINL SGILKVTEGY GKSVSLSVMS GNEVIFCKES QIDERQLRLV TELPDCCTAG TNLMNLIFQV TELDGSLDTS IHHDEKSGCF
1101: HTMSIESDSS SVESAIRYAF VHGSCKVSSL SLPENEGVFS CRVFHSRYPE LQMSIKIQVT SAPTSEREES GYSTPHSKTT PPPESGIPSI TNPWPTPCSQ
1201: FGVLAIRSSS LALSSETSLM DMAQYTEDLK EKINIDEERR VELEERLKCL QAQREHAEQE CSRLQASLEP LGAPFPECLS TKESMMKQIE EKHHDTAASV
1301: FCCLYRKAPP PRSLFLSQKG MFGVVALLGS VASTSLSRVL SEYLGKDTML SLVCKSSQFG PKSDEYRKFQ SEAASLGRSI TNRFLVICLD ATRPWRNGLV
1401: RNDPQKRLAM DNPYLPNGDP IPGFKGYAVN MIDLASEELD IQSSSGYGLR ETLFYGVFRE LQVYETAEHL EAALPHINGG DAVSLDGVIA RENGFIYSGC
1501: CTPEVHFPIT VTERQEKALV QLEITRDKKR KTEEMMTEEN RSLRRLVKKL KKANEKYQNF TAMADS
0101: FKPDLCHIIR LDDGSGIAST MYENLWDLTP DTDLLKELPE NYSFETALAD LIDNSLQAVW PYREGARKLI SVDISGDHIT VFDTGRGMDS SEGNSIDKWG
0201: KIGASLHRSQ KTGAIGGNPP YLKPYFGMFG YGGPYASMFL GRRTLVSSKT KESKKVFTLQ FKKEALIDNR SIVGKNWKTD GGMRDPSEEE MKLSPHGSFT
0301: KVEIFESEFD ISKIYQLQCR LKDIYFPYIQ CDELSKTGRT ERPVAFQVNG EDLAEIAGGE VAITNLHSKG QFFSFQIRFT LFGGKRKGTA QEANARLKFV
0401: YFPIVQGKES IEKILQSLEE EGCKVSESFQ TFGRVSLRRL GRLLPEVRWD SIPFMQRGNR ASTLQKSCRR VKCFVDLDAG FSPTPSKTDL ASQNPFSVAL
0501: RNFGSKSTEK EKDDDVNIVI HREGKSVSYA HLEEKYQEWV LEMHNTHDEE AASGLDEAVL IVGSLDKKAL GILRDAVRVH KEVRRKEKTW KRGQNIKILR
0601: GAYAGIHNNN VYATIDYFLI EGFEDEAGGD TRILCRPIDR PENEGCKLSI IDGISKLEVQ SSLSLPITII DSGKCLPVDA NEWNRKLDKQ QEKAPSKIDL
0701: LDERDCRELK IDGELPIGNS VRAGKAPPKQ IVAVVRPACF TSLTPSKKLD QKNIVKMDGE EMVMVVKLKS SDKNISSQRL FPTSRKGISG LYIFSLGSKF
0801: PNLFKKAGTY NFSFSIGNSI KCNKTVVVRP SSKAARWELD DNLESLPCNV RVGSSLPPFR IACFDKYKNK IPFTSVPSLE VELEASPGFL IKIDKLETNL
0901: INDGLILKIE NMLVETDELD QIRPNYEATL EIRAMDNPFS VSVPCKVNPG PLKRVAVNNP KALENLLPDS TVEDFILELF DGYNNHVAEG TDVLIHIDGY
1001: RIEDWMGINR KVDSRGCINL SGILKVTEGY GKSVSLSVMS GNEVIFCKES QIDERQLRLV TELPDCCTAG TNLMNLIFQV TELDGSLDTS IHHDEKSGCF
1101: HTMSIESDSS SVESAIRYAF VHGSCKVSSL SLPENEGVFS CRVFHSRYPE LQMSIKIQVT SAPTSEREES GYSTPHSKTT PPPESGIPSI TNPWPTPCSQ
1201: FGVLAIRSSS LALSSETSLM DMAQYTEDLK EKINIDEERR VELEERLKCL QAQREHAEQE CSRLQASLEP LGAPFPECLS TKESMMKQIE EKHHDTAASV
1301: FCCLYRKAPP PRSLFLSQKG MFGVVALLGS VASTSLSRVL SEYLGKDTML SLVCKSSQFG PKSDEYRKFQ SEAASLGRSI TNRFLVICLD ATRPWRNGLV
1401: RNDPQKRLAM DNPYLPNGDP IPGFKGYAVN MIDLASEELD IQSSSGYGLR ETLFYGVFRE LQVYETAEHL EAALPHINGG DAVSLDGVIA RENGFIYSGC
1501: CTPEVHFPIT VTERQEKALV QLEITRDKKR KTEEMMTEEN RSLRRLVKKL KKANEKYQNF TAMADS
Arabidopsis Description
GMI1Structural maintenance of chromosomes flexible hinge domain-containing protein GMI1 [Source:UniProtKB/Swiss-Prot;Acc:F4KFS5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.