Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g083130.1.1 | Tomato | cytosol | 36.01 | 47.68 |
| KRH03942 | Soybean | cytosol | 31.31 | 46.79 |
| GSMUA_Achr10P... | Banana | plasma membrane | 40.37 | 41.88 |
| TraesCS7A01G321900.2 | Wheat | cytosol | 33.95 | 37.59 |
| TraesCS7B01G222800.1 | Wheat | cytosol | 33.72 | 37.33 |
| OQU84844 | Sorghum | cytosol, mitochondrion, peroxisome, plastid | 30.28 | 35.92 |
| TraesCS7D01G318800.4 | Wheat | plastid | 33.49 | 35.31 |
| VIT_16s0098g01820.t01 | Wine grape | cytosol | 6.36 | 25.75 |
Protein Annotations
| MapMan:35.1 | ProteinID:CCB48047 | ProteinID:CCB48047.1 | ncoils:Coil | UniProt:F6H783 | EMBL:FN595247 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005694 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 |
| GO:GO:0051276 | InterPro:HATPase_C_sf | InterPro:IPR036890 | PANTHER:PTHR33566 | PANTHER:PTHR33566:SF3 | InterPro:SMC_hinge_sf |
| SUPFAM:SSF55874 | SUPFAM:SSF75553 | UniParc:UPI000210A0AC | ArrayExpress:VIT_16s0098g01810 | EnsemblPlantsGene:VIT_16s0098g01810 | EnsemblPlants:VIT_16s0098g01810.t01 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr16:+:21873517..21906573
Molecular Weight (calculated)
197030.0 Da
IEP (calculated)
7.739
GRAVY (calculated)
-0.341
Length
1744 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEEEVPPQRG KKRSIVEISG DNDLGAIYKF KILLPNGTSL GLNLHEHKLS NLLMPLQEFI GLVRTEYFRT RRQPESPGTR QKIMWKSKDI FLVDASENRM
0101: KHTVNFRKFE PHKCHILQLN DGSGQSADTF KNMWDLTPDT DLLAELPEEY AFETALADLI DNSLQAVWSN GMSERRLISV DIVEDRISIF DSGPGMDGSD
0201: ENSIVKWGKM GASLHRSSKA QAIGGKPPYL KCPQQCSLCK KEGKKQKKGK KKIIGITHFM LNNSVVKTLK FNVVNFLQRI FCRHCQPIYE MPLIIYAHAC
0301: VRRKRDYRKN MRQMREFRWS WEIWDALYCL FEIEFKPFFG MFGYGGPIAS MHLGRCALVS SKTKESKKVY TLHLEREALL SSSGSDLTWR TSGGIRNPSE
0401: EETEKSPHGS FTKVEIFKPK IERLNVFQLQ RKLKDIYFPY IQCDEVCDTG KTNTPVEFQV NGLDLAEIDG GEVGTTNLHS SNGPEFVLQL RFYGNQDNVA
0501: TKSPGLRSSQ EANARLKCVY FPIVEGKENL ETILEKLEAE GCGTNENYDT FSRVSIRRLG RLLPDARWSL LPFMEHKLKK GDKGQLLKRC CRRVKCFIDT
0601: DAGFNPTPSK TDLAHHNPFT KALKDFGNKP PEKGREINVE ILRDGKSLTL LQLEKEYLDW ISQMHDLYDE EIDSGEDQPV IVVGSLNKKQ LGISSDVVRV
0701: HEIIRRKGKS WKRGQKIKVL KGACPGCHKS NVFATLEYIL LEGFQGDAGG EARLICRPLS LPDEDGCILA VDDGAASFDC RGSLSLPISV IDSGKCLAVE
0801: SSEWLFQLEK QRQKAPSTID ILSERHCLEL EVDGALPVDA PVHAGQVPPK EIVAVVRPAS FVSSSASKNL DQKYIIKDNF ASKNLDQKYI IKDNLELSME
0901: VKLMDGTKDT KHIYSKCVTP SSRNGFHGLY IFPLGCKFPQ LFQKAGVYTF TVFLKGSSFK SCEKRVLVKA LPKVSSWRFS SDIQNTVYSV RAGSCLPPFS
1001: IACYDSYENQ IPFTSIPEFI IKSNWNGGVL ADFDKMKLEL SSDNLTLKVK DVLIESSDLD KIRPSYATTL VLCPRDELPS ISVACEVNPG PLERAIAQPP
1101: VSDNQLLPGC VIEELVLEVS SHIVIILPHD DQFIHTIVLC MLFLPLFMFD AYGNHAREGL EVQFNVDGFC FQDHNGLKRK VDDRGCIDLS GLLRVTTGYG
1201: KNVSLSVLSG NKVVFKQELQ TEKRELRAAS IVPQSCAAGS QLENIVFEII NSKGEVDETV HEEEKHGQFH TLTIMSDSFY LDGSVRFAFR NGRCIIPTIP
1301: LPRKQGDFTF LAAHSCHPEL SLAVKVSVVE VLKVKQEDVQ LQYPNENMLL LQDSPAPRHV ENSLVESLMN DEKEIEDDIC KIGLFIGDNE RKLELLHKQK
1401: GDIEQSIEKL QASVEYDSFN NHRGYLSKKE SVMRCIEKKD KSAAAFFCNL SREIPFQDPV SQLMKDIVGV VALLATVRIN RLGRMLAEYL GEDQMLAVVC
1501: RSYEAASKLE KYEWDGKVDR EHALYAVAKT FGKPINDRFL VICLENIRPY IGGFQDNDPQ RKLNIPNPIL PTGEMPPGFL GYAVNMVDLE SHHLLTRTTA
1601: GHGLRETLFY CLFGELQVYQ TREDMKKACF YARHGAVSLD GGIMKGNGVI SFGCREPQIW FPVANLESPK NVRILEVIEE KRTSLRLVHN EIGKLTKIIN
1701: KAQKKLQKKI SRCRKLMDRL EPCMKGHYLE YNTNTINSLE NSPK
0101: KHTVNFRKFE PHKCHILQLN DGSGQSADTF KNMWDLTPDT DLLAELPEEY AFETALADLI DNSLQAVWSN GMSERRLISV DIVEDRISIF DSGPGMDGSD
0201: ENSIVKWGKM GASLHRSSKA QAIGGKPPYL KCPQQCSLCK KEGKKQKKGK KKIIGITHFM LNNSVVKTLK FNVVNFLQRI FCRHCQPIYE MPLIIYAHAC
0301: VRRKRDYRKN MRQMREFRWS WEIWDALYCL FEIEFKPFFG MFGYGGPIAS MHLGRCALVS SKTKESKKVY TLHLEREALL SSSGSDLTWR TSGGIRNPSE
0401: EETEKSPHGS FTKVEIFKPK IERLNVFQLQ RKLKDIYFPY IQCDEVCDTG KTNTPVEFQV NGLDLAEIDG GEVGTTNLHS SNGPEFVLQL RFYGNQDNVA
0501: TKSPGLRSSQ EANARLKCVY FPIVEGKENL ETILEKLEAE GCGTNENYDT FSRVSIRRLG RLLPDARWSL LPFMEHKLKK GDKGQLLKRC CRRVKCFIDT
0601: DAGFNPTPSK TDLAHHNPFT KALKDFGNKP PEKGREINVE ILRDGKSLTL LQLEKEYLDW ISQMHDLYDE EIDSGEDQPV IVVGSLNKKQ LGISSDVVRV
0701: HEIIRRKGKS WKRGQKIKVL KGACPGCHKS NVFATLEYIL LEGFQGDAGG EARLICRPLS LPDEDGCILA VDDGAASFDC RGSLSLPISV IDSGKCLAVE
0801: SSEWLFQLEK QRQKAPSTID ILSERHCLEL EVDGALPVDA PVHAGQVPPK EIVAVVRPAS FVSSSASKNL DQKYIIKDNF ASKNLDQKYI IKDNLELSME
0901: VKLMDGTKDT KHIYSKCVTP SSRNGFHGLY IFPLGCKFPQ LFQKAGVYTF TVFLKGSSFK SCEKRVLVKA LPKVSSWRFS SDIQNTVYSV RAGSCLPPFS
1001: IACYDSYENQ IPFTSIPEFI IKSNWNGGVL ADFDKMKLEL SSDNLTLKVK DVLIESSDLD KIRPSYATTL VLCPRDELPS ISVACEVNPG PLERAIAQPP
1101: VSDNQLLPGC VIEELVLEVS SHIVIILPHD DQFIHTIVLC MLFLPLFMFD AYGNHAREGL EVQFNVDGFC FQDHNGLKRK VDDRGCIDLS GLLRVTTGYG
1201: KNVSLSVLSG NKVVFKQELQ TEKRELRAAS IVPQSCAAGS QLENIVFEII NSKGEVDETV HEEEKHGQFH TLTIMSDSFY LDGSVRFAFR NGRCIIPTIP
1301: LPRKQGDFTF LAAHSCHPEL SLAVKVSVVE VLKVKQEDVQ LQYPNENMLL LQDSPAPRHV ENSLVESLMN DEKEIEDDIC KIGLFIGDNE RKLELLHKQK
1401: GDIEQSIEKL QASVEYDSFN NHRGYLSKKE SVMRCIEKKD KSAAAFFCNL SREIPFQDPV SQLMKDIVGV VALLATVRIN RLGRMLAEYL GEDQMLAVVC
1501: RSYEAASKLE KYEWDGKVDR EHALYAVAKT FGKPINDRFL VICLENIRPY IGGFQDNDPQ RKLNIPNPIL PTGEMPPGFL GYAVNMVDLE SHHLLTRTTA
1601: GHGLRETLFY CLFGELQVYQ TREDMKKACF YARHGAVSLD GGIMKGNGVI SFGCREPQIW FPVANLESPK NVRILEVIEE KRTSLRLVHN EIGKLTKIIN
1701: KAQKKLQKKI SRCRKLMDRL EPCMKGHYLE YNTNTINSLE NSPK
0001: MSSRRSVKRS LVLDDDDDED IFYNFKVLLP NGTSVKLTLK NPEPEISMQS FVNLVKKEYD NARKDCLLMS KRMKVDWNSG GKFHLESNGG KMKGIVRFAA
0101: FKPDLCHIIR LDDGSGIAST MYENLWDLTP DTDLLKELPE NYSFETALAD LIDNSLQAVW PYREGARKLI SVDISGDHIT VFDTGRGMDS SEGNSIDKWG
0201: KIGASLHRSQ KTGAIGGNPP YLKPYFGMFG YGGPYASMFL GRRTLVSSKT KESKKVFTLQ FKKEALIDNR SIVGKNWKTD GGMRDPSEEE MKLSPHGSFT
0301: KVEIFESEFD ISKIYQLQCR LKDIYFPYIQ CDELSKTGRT ERPVAFQVNG EDLAEIAGGE VAITNLHSKG QFFSFQIRFT LFGGKRKGTA QEANARLKFV
0401: YFPIVQGKES IEKILQSLEE EGCKVSESFQ TFGRVSLRRL GRLLPEVRWD SIPFMQRGNR ASTLQKSCRR VKCFVDLDAG FSPTPSKTDL ASQNPFSVAL
0501: RNFGSKSTEK EKDDDVNIVI HREGKSVSYA HLEEKYQEWV LEMHNTHDEE AASGLDEAVL IVGSLDKKAL GILRDAVRVH KEVRRKEKTW KRGQNIKILR
0601: GAYAGIHNNN VYATIDYFLI EGFEDEAGGD TRILCRPIDR PENEGCKLSI IDGISKLEVQ SSLSLPITII DSGKCLPVDA NEWNRKLDKQ QEKAPSKIDL
0701: LDERDCRELK IDGELPIGNS VRAGKAPPKQ IVAVVRPACF TSLTPSKKLD QKNIVKMDGE EMVMVVKLKS SDKNISSQRL FPTSRKGISG LYIFSLGSKF
0801: PNLFKKAGTY NFSFSIGNSI KCNKTVVVRP SSKAARWELD DNLESLPCNV RVGSSLPPFR IACFDKYKNK IPFTSVPSLE VELEASPGFL IKIDKLETNL
0901: INDGLILKIE NMLVETDELD QIRPNYEATL EIRAMDNPFS VSVPCKVNPG PLKRVAVNNP KALENLLPDS TVEDFILELF DGYNNHVAEG TDVLIHIDGY
1001: RIEDWMGINR KVDSRGCINL SGILKVTEGY GKSVSLSVMS GNEVIFCKES QIDERQLRLV TELPDCCTAG TNLMNLIFQV TELDGSLDTS IHHDEKSGCF
1101: HTMSIESDSS SVESAIRYAF VHGSCKVSSL SLPENEGVFS CRVFHSRYPE LQMSIKIQVT SAPTSEREES GYSTPHSKTT PPPESGIPSI TNPWPTPCSQ
1201: FGVLAIRSSS LALSSETSLM DMAQYTEDLK EKINIDEERR VELEERLKCL QAQREHAEQE CSRLQASLEP LGAPFPECLS TKESMMKQIE EKHHDTAASV
1301: FCCLYRKAPP PRSLFLSQKG MFGVVALLGS VASTSLSRVL SEYLGKDTML SLVCKSSQFG PKSDEYRKFQ SEAASLGRSI TNRFLVICLD ATRPWRNGLV
1401: RNDPQKRLAM DNPYLPNGDP IPGFKGYAVN MIDLASEELD IQSSSGYGLR ETLFYGVFRE LQVYETAEHL EAALPHINGG DAVSLDGVIA RENGFIYSGC
1501: CTPEVHFPIT VTERQEKALV QLEITRDKKR KTEEMMTEEN RSLRRLVKKL KKANEKYQNF TAMADS
0101: FKPDLCHIIR LDDGSGIAST MYENLWDLTP DTDLLKELPE NYSFETALAD LIDNSLQAVW PYREGARKLI SVDISGDHIT VFDTGRGMDS SEGNSIDKWG
0201: KIGASLHRSQ KTGAIGGNPP YLKPYFGMFG YGGPYASMFL GRRTLVSSKT KESKKVFTLQ FKKEALIDNR SIVGKNWKTD GGMRDPSEEE MKLSPHGSFT
0301: KVEIFESEFD ISKIYQLQCR LKDIYFPYIQ CDELSKTGRT ERPVAFQVNG EDLAEIAGGE VAITNLHSKG QFFSFQIRFT LFGGKRKGTA QEANARLKFV
0401: YFPIVQGKES IEKILQSLEE EGCKVSESFQ TFGRVSLRRL GRLLPEVRWD SIPFMQRGNR ASTLQKSCRR VKCFVDLDAG FSPTPSKTDL ASQNPFSVAL
0501: RNFGSKSTEK EKDDDVNIVI HREGKSVSYA HLEEKYQEWV LEMHNTHDEE AASGLDEAVL IVGSLDKKAL GILRDAVRVH KEVRRKEKTW KRGQNIKILR
0601: GAYAGIHNNN VYATIDYFLI EGFEDEAGGD TRILCRPIDR PENEGCKLSI IDGISKLEVQ SSLSLPITII DSGKCLPVDA NEWNRKLDKQ QEKAPSKIDL
0701: LDERDCRELK IDGELPIGNS VRAGKAPPKQ IVAVVRPACF TSLTPSKKLD QKNIVKMDGE EMVMVVKLKS SDKNISSQRL FPTSRKGISG LYIFSLGSKF
0801: PNLFKKAGTY NFSFSIGNSI KCNKTVVVRP SSKAARWELD DNLESLPCNV RVGSSLPPFR IACFDKYKNK IPFTSVPSLE VELEASPGFL IKIDKLETNL
0901: INDGLILKIE NMLVETDELD QIRPNYEATL EIRAMDNPFS VSVPCKVNPG PLKRVAVNNP KALENLLPDS TVEDFILELF DGYNNHVAEG TDVLIHIDGY
1001: RIEDWMGINR KVDSRGCINL SGILKVTEGY GKSVSLSVMS GNEVIFCKES QIDERQLRLV TELPDCCTAG TNLMNLIFQV TELDGSLDTS IHHDEKSGCF
1101: HTMSIESDSS SVESAIRYAF VHGSCKVSSL SLPENEGVFS CRVFHSRYPE LQMSIKIQVT SAPTSEREES GYSTPHSKTT PPPESGIPSI TNPWPTPCSQ
1201: FGVLAIRSSS LALSSETSLM DMAQYTEDLK EKINIDEERR VELEERLKCL QAQREHAEQE CSRLQASLEP LGAPFPECLS TKESMMKQIE EKHHDTAASV
1301: FCCLYRKAPP PRSLFLSQKG MFGVVALLGS VASTSLSRVL SEYLGKDTML SLVCKSSQFG PKSDEYRKFQ SEAASLGRSI TNRFLVICLD ATRPWRNGLV
1401: RNDPQKRLAM DNPYLPNGDP IPGFKGYAVN MIDLASEELD IQSSSGYGLR ETLFYGVFRE LQVYETAEHL EAALPHINGG DAVSLDGVIA RENGFIYSGC
1501: CTPEVHFPIT VTERQEKALV QLEITRDKKR KTEEMMTEEN RSLRRLVKKL KKANEKYQNF TAMADS
Arabidopsis Description
GMI1Structural maintenance of chromosomes flexible hinge domain-containing protein GMI1 [Source:UniProtKB/Swiss-Prot;Acc:F4KFS5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.