Factsheet for Solyc11g032160.1.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum

Predictor Summary:

extracellular 6
golgi 5
plasma membrane 5
endoplasmic reticulum 6
vacuole 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc01g111900.2.1
Solyc02g078550.2.1
Solyc04g082460.2.1
Solyc12g009110.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G49250.1	Solyc04g082460.2.1	AT1G20630.1	21798944
AT3G49250.1	Solyc02g078550.2.1	AT4G21670.1	18541146
AT3G49250.1	Solyc01g111900.2.1	AT4G35160.1	21798944
AT3G49250.1	Solyc12g009110.1.1	AT4G35160.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g071800.1.1	Tomato	cytosol	45.0	38.89
Solyc11g032150.1.1	Tomato	cytosol, extracellular, nucleus	19.29	37.5
Solyc03g071820.1.1	Tomato	cytosol	38.57	35.53
Solyc03g071790.1.1	Tomato	cytosol	44.29	26.61
Solyc03g083210.2.1	Tomato	cytosol, nucleus	55.71	17.85
GSMUA_Achr10P...	Banana	cytosol	41.43	17.01
Zm00001d013511_P001	Maize	cytosol	34.29	16.67
Zm00001d053353_P001	Maize	cytosol	31.43	16.48
Bra019588.1-P	Field mustard	cytosol	41.43	15.06
VIT_16s0098g01820.t01	Wine grape	cytosol	45.71	14.85
KRH64437	Soybean	cytosol, nucleus	45.71	14.68
Solyc06g051990.2.1	Tomato	cytosol	48.57	14.56
KRH53504	Soybean	plastid	42.14	14.46
CDY00194	Canola	cytosol	41.43	14.36
CDX86984	Canola	cytosol	40.0	13.93
Os01t0235200-02	Rice	cytosol	41.43	13.88
KXG31464	Sorghum	cytosol	40.0	13.83
AT3G49250.1	Thale cress	cytosol	40.0	13.33
TraesCS3A01G158200.1	Wheat	cytosol	41.43	12.72
TraesCS3B01G185200.1	Wheat	cytosol	41.43	12.72
TraesCS3D01G165900.1	Wheat	cytosol	41.43	12.72
CDY05915	Canola	cytosol	37.14	12.38
CDY08119	Canola	cytosol, plastid	37.14	12.32
Bra017998.1-P	Field mustard	cytosol	37.14	12.04
HORVU3Hr1G057390.1	Barley	cytosol	40.71	11.9
Zm00001d050870_P001	Maize	cytosol	14.29	9.95
Solyc03g083170.2.1	Tomato	cytosol	51.43	9.25
Solyc03g083130.1.1	Tomato	cytosol	32.86	3.49

Protein Annotations

EnsemblPlants:Solyc11g032160.1.1	EnsemblPlantsGene:Solyc11g032160.1	PANTHER:PTHR33566	PANTHER:PTHR33566:SF1	UniParc:UPI0002769C6A	UniProt:K4D7Q1
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr11:-:25661948..25662563

Molecular Weight (calculated)

15971.8 Da

IEP (calculated)

9.719

GRAVY (calculated)

0.161

Length

140 amino acids

Sequence
(BLAST)

001: MIEVLLLDNF FMKLTLLGLT FVCLSLKSKS LSFYIGLETT LAVVCKTHNG VKALETFGMQ GLMNKRSCFY GAERRIAIRK PKHLNEENPL GFLGFTVNMI
101: NIDTTNLYYV TSTGHGLRET LFWGLISWLK SYKTRADMMQ

Best Arabidopsis Sequence Match ( AT3G49250.1 )
(BLAST)

001: MYPTGQQISF QTTPLNVQDP TRMMNLDQSS PVARNETQNG GGIAHAEFAM FNSKRLESDL EAMGNKIKQH EDNLKFLKSQ KNKMDEAIVD LQVHMSKLNS
101: SPTPRSENSD NSLQGEDINA QILRHENSAA GVLSLVETLH GAQASQLMLT KGVVGVVAKL GKVNDENLSQ ILSNYLGTRS MLAVVCRNYE SVTALEAYDN
201: HGNIDINAGL HCLGSSIGRE IGDSFDAICL ENLRPYVGQH IADDLQRRLD LLKPKLPNGE CPPGFLGFAV NMIQIDPAYL LCVTSYGYGL RETLFYNLFS
301: RLQVYKTRAD MISALPCISD GAVSLDGGII RKTGIFNLGN RDEVNVRFAK PTASRTMDNY SEAEKKMKEL KWKKEKTLED IKREQVLREH AVFNFGKKKE
401: EFVRCLAQSS CTNQPMNTPR

Arabidopsis Description

DMS3IDN1 [Source:UniProtKB/TrEMBL;Acc:A0A178VBM0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.