Factsheet for Os01t0235200-02

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0639000-01
Os04t0529500-02

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G49250.1	Os02t0639000-01	AT4G21670.1	18541146
AT3G49250.1	Os04t0529500-02	AT4G21670.1	18541146

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG31464	Sorghum	cytosol	68.66	70.86
Zm00001d053353_P001	Maize	cytosol	41.39	64.79
Zm00001d013511_P001	Maize	cytosol	42.58	61.81
TraesCS3D01G165900.1	Wheat	cytosol	65.55	60.09
TraesCS3B01G185200.1	Wheat	cytosol	65.55	60.09
TraesCS3A01G158200.1	Wheat	cytosol	65.31	59.87
Zm00001d050870_P001	Maize	cytosol	28.23	58.71
HORVU3Hr1G057390.1	Barley	cytosol	65.55	57.2
Solyc03g071800.1.1	Tomato	cytosol	21.77	56.17
GSMUA_Achr10P...	Banana	cytosol	45.45	55.72
Solyc03g071820.1.1	Tomato	cytosol	19.14	52.63
Solyc11g032150.1.1	Tomato	cytosol, extracellular, nucleus	8.61	50.0
KRG97196	Soybean	cytosol	34.93	48.18
VIT_16s0098g01820.t01	Wine grape	cytosol	45.69	44.32
Solyc03g071790.1.1	Tomato	cytosol	24.64	44.21
Solyc11g032160.1.1	Tomato	endoplasmic reticulum, extracellular	13.88	41.43
Bra019588.1-P	Field mustard	cytosol	38.04	41.3
KRH64437	Soybean	cytosol, nucleus	42.34	40.6
Solyc03g083210.2.1	Tomato	cytosol, nucleus	41.15	39.36
CDY00194	Canola	cytosol	38.04	39.36
CDX86984	Canola	cytosol	37.56	39.05
AT3G49250.1	Thale cress	cytosol	39.0	38.81
CDY08119	Canola	cytosol, plastid	38.76	38.39
CDY05915	Canola	cytosol	38.52	38.33
Bra017998.1-P	Field mustard	cytosol	39.47	38.19
Solyc06g051990.2.1	Tomato	cytosol	40.19	35.97
KRH53504	Soybean	plastid	34.69	35.54
Solyc03g083170.2.1	Tomato	cytosol	39.47	21.21

Protein Annotations

MapMan:12.5.1.14.2	EntrezGene:4327777	EMBL:AK064013	ProteinID:BAD81261.1	ProteinID:BAD81389.1	ProteinID:BAF04434.1
ProteinID:BAS71214.1	ncoils:Coil	GO:GO:0000419	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006259
GO:GO:0006306	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016043
GO:GO:0031047	GO:GO:0040029	GO:GO:0042803	GO:GO:0070921	GO:GO:0080188	EnsemblPlantsGene:Os01g0235200
EnsemblPlants:Os01t0235200-02	PANTHER:PTHR33566	PANTHER:PTHR33566:SF1	UniProt:Q5NAX4	UniParc:UPI000049E6F6	RefSeq:XP_015621097.1

Description

Conserved hypothetical protein. (Os01t0235200-01);Conserved hypothetical protein. (Os01t0235200-02)

Coordinates

chr1:-:7460350..7465499

Molecular Weight (calculated)

46313.8 Da

IEP (calculated)

6.851

GRAVY (calculated)

-0.269

Length

418 amino acids

Sequence
(BLAST)

001: MAVQSAERGV EAPPLTLSIF EFNSKVMQDE LQKLALKVNH HEENIRFLKS ELNAVEDSCA DLGIKIGNYY SSMAAIANND TSVEEAEQRT IQSILKQDET
101: AAGIICQLKI RHYQHASKLP LMKDVLGVVA TLGKINNDNL SRVLSEYLGL DNMLGVVCKT YDGVEGLETY DKEGMVDKTS GIHGLGRTIG KFLDGRFTVF
201: CLENIRPFSG DFMIDDPQRK LLLHKPRLPS GEFPPGFLGF AVNMIHLDQA NLSCLTAGGH GLRETLFYSL FSQLQVYKTR AELRNAIPLI NDGAVSLDGS
301: ILRPNGSFCL GNRASLGIQF PVTANLGVSN LPVTITELEE QVKHKNWEKE RLLEDIKRQE DLLNQVKDLF SKKKEQFMAY ITQPGMLQRA SQASPTIPSP
401: ATPGSNPFGS RPPHLRGR

Best Arabidopsis Sequence Match ( AT3G49250.1 )
(BLAST)

001: MYPTGQQISF QTTPLNVQDP TRMMNLDQSS PVARNETQNG GGIAHAEFAM FNSKRLESDL EAMGNKIKQH EDNLKFLKSQ KNKMDEAIVD LQVHMSKLNS
101: SPTPRSENSD NSLQGEDINA QILRHENSAA GVLSLVETLH GAQASQLMLT KGVVGVVAKL GKVNDENLSQ ILSNYLGTRS MLAVVCRNYE SVTALEAYDN
201: HGNIDINAGL HCLGSSIGRE IGDSFDAICL ENLRPYVGQH IADDLQRRLD LLKPKLPNGE CPPGFLGFAV NMIQIDPAYL LCVTSYGYGL RETLFYNLFS
301: RLQVYKTRAD MISALPCISD GAVSLDGGII RKTGIFNLGN RDEVNVRFAK PTASRTMDNY SEAEKKMKEL KWKKEKTLED IKREQVLREH AVFNFGKKKE
401: EFVRCLAQSS CTNQPMNTPR

Arabidopsis Description

DMS3IDN1 [Source:UniProtKB/TrEMBL;Acc:A0A178VBM0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.