Factsheet for GSMUA_Achr10P26210_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr11P...
GSMUA_Achr11P...
GSMUA_Achr11P...
GSMUA_Achr5P06970_001
GSMUA_Achr8P14120_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G49250.1	GSMUA_Achr5P06970_001	AT3G61790.1	21798944
AT3G49250.1	GSMUA_Achr11P...	AT4G21670.1	18541146
AT3G49250.1	GSMUA_Achr11P...	AT4G21670.1	18541146
AT3G49250.1	GSMUA_Achr11P...	AT4G21670.1	18541146
AT3G49250.1	GSMUA_Achr8P14120_001	AT4G21670.1	18541146

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g071800.1.1	Tomato	cytosol	28.45	59.88
Solyc03g071820.1.1	Tomato	cytosol	24.63	55.26
Solyc11g032150.1.1	Tomato	cytosol, extracellular, nucleus	11.44	54.17
KRG97196	Soybean	cytosol	46.33	52.15
Solyc03g071790.1.1	Tomato	cytosol	33.72	49.36
Zm00001d013511_P001	Maize	cytosol	40.76	48.26
KXG31464	Sorghum	cytosol	56.89	47.9
Zm00001d053353_P001	Maize	cytosol	36.36	46.44
VIT_16s0098g01820.t01	Wine grape	cytosol	57.48	45.48
Os01t0235200-02	Rice	cytosol	55.72	45.45
KRH64437	Soybean	cytosol, nucleus	54.25	42.43
Zm00001d050870_P001	Maize	cytosol	24.93	42.29
Bra019588.1-P	Field mustard	cytosol	46.92	41.56
Solyc11g032160.1.1	Tomato	endoplasmic reticulum, extracellular	17.01	41.43
CDY00194	Canola	cytosol	47.21	39.85
Solyc03g083210.2.1	Tomato	cytosol, nucleus	50.73	39.59
CDX86984	Canola	cytosol	46.63	39.55
TraesCS3B01G185200.1	Wheat	cytosol	52.49	39.25
TraesCS3D01G165900.1	Wheat	cytosol	51.91	38.82
TraesCS3A01G158200.1	Wheat	cytosol	51.91	38.82
AT3G49250.1	Thale cress	cytosol	47.8	38.81
Solyc06g051990.2.1	Tomato	cytosol	52.49	38.33
CDY05915	Canola	cytosol	46.92	38.1
CDY08119	Canola	cytosol, plastid	46.92	37.91
Bra017998.1-P	Field mustard	cytosol	47.21	37.27
HORVU3Hr1G057390.1	Barley	cytosol	51.91	36.95
KRH53504	Soybean	plastid	43.7	36.52
Solyc03g083170.2.1	Tomato	cytosol	51.91	22.75
GSMUA_Achr10P...	Banana	plasma membrane	32.55	6.6

Protein Annotations

MapMan:12.5.1.14.2	ncoils:Coil	GO:GO:0000419	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006259
GO:GO:0006306	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016043
GO:GO:0031047	GO:GO:0040029	GO:GO:0042803	GO:GO:0070921	GO:GO:0080188	EnsemblPlantsGene:GSMUA_Achr10G26210_001
EnsemblPlants:GSMUA_Achr10P26210_001	EnsemblPlants:GSMUA_Achr10T26210_001	UniProt:M0RLJ5	PANTHER:PTHR33566	PANTHER:PTHR33566:SF1	UniParc:UPI000295E7D9

Description

ATP binding protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr10G26210_001]

Coordinates

chr10:+:29894726..29897458

Molecular Weight (calculated)

38354.6 Da

IEP (calculated)

6.719

GRAVY (calculated)

-0.217

Length

341 amino acids

Sequence
(BLAST)

001: MNSIDESILD MQVNLGKYHS SAGAVDNNDF STANTEKQTI ENILKQEQTA AGIICQLKVY HAVQASKLPL TKDVLGIVAT LGKVNDVNLS RVLSDYLGPE
101: NMLAIVCKTY EGVKELEKYD KEGMIDKSYG LHGIGKAIGR HLDGRYLVFC IENLRPYIGG FVPEDPQRRL ALLKPRLPNG DPPPGFIDFA VNMIDVDHMH
201: LSCITASGHG LRETLFYNLF SRLQVYKTRS DMLRALPFLS EGAISLDGGI MKSGGLFYLG GRNCIEVIFP ISSGISRLPT DVLEIEEQLK LLRWQKERLL
301: EDMQREETLL NHVKTMFSTK KEEYVKYLRE TAQILQQGLQ R

Best Arabidopsis Sequence Match ( AT3G49250.1 )
(BLAST)

001: MYPTGQQISF QTTPLNVQDP TRMMNLDQSS PVARNETQNG GGIAHAEFAM FNSKRLESDL EAMGNKIKQH EDNLKFLKSQ KNKMDEAIVD LQVHMSKLNS
101: SPTPRSENSD NSLQGEDINA QILRHENSAA GVLSLVETLH GAQASQLMLT KGVVGVVAKL GKVNDENLSQ ILSNYLGTRS MLAVVCRNYE SVTALEAYDN
201: HGNIDINAGL HCLGSSIGRE IGDSFDAICL ENLRPYVGQH IADDLQRRLD LLKPKLPNGE CPPGFLGFAV NMIQIDPAYL LCVTSYGYGL RETLFYNLFS
301: RLQVYKTRAD MISALPCISD GAVSLDGGII RKTGIFNLGN RDEVNVRFAK PTASRTMDNY SEAEKKMKEL KWKKEKTLED IKREQVLREH AVFNFGKKKE
401: EFVRCLAQSS CTNQPMNTPR

Arabidopsis Description

DMS3IDN1 [Source:UniProtKB/TrEMBL;Acc:A0A178VBM0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.