Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- plastid 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU87104 | Sorghum | cytosol, mitochondrion | 61.83 | 62.31 |
| TraesCS3B01G244200.1 | Wheat | mitochondrion | 59.54 | 60.47 |
| Zm00001d011274_P001 | Maize | mitochondrion | 58.02 | 56.72 |
| TraesCS3D01G216100.1 | Wheat | cytosol | 60.31 | 52.32 |
| Os01t0719600-01 | Rice | cytosol | 45.04 | 41.55 |
| Os05t0534500-01 | Rice | cytosol, mitochondrion | 43.51 | 35.62 |
| Os08t0205400-01 | Rice | extracellular, plasma membrane | 21.37 | 34.57 |
| Os03t0819400-01 | Rice | plastid | 33.59 | 21.67 |
| Os08t0405700-01 | Rice | mitochondrion | 33.59 | 21.46 |
| Os01t0976300-01 | Rice | mitochondrion, plastid | 30.53 | 19.61 |
Protein Annotations
| EntrezGene:107276285 | Gene3D:3.30.70.100 | MapMan:35.2 | ProteinID:BAB91822.1 | ProteinID:BAB92318.1 | ProteinID:BAS72981.1 |
| ProteinID:EAZ12551.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0019725 | GO:GO:0030001 |
| GO:GO:0046872 | GO:GO:0046914 | GO:GO:0046916 | InterPro:HMA_dom | InterPro:HMA_dom_sf | InterPro:IPR006121 |
| EnsemblPlantsGene:Os01g0595201 | EnsemblPlants:Os01t0595201-00 | PFAM:PF00403 | PFscan:PS50846 | PANTHER:PTHR22814 | PANTHER:PTHR22814:SF102 |
| UniProt:Q8L3Y3 | SUPFAM:SSF55008 | UniParc:UPI000009FF08 | RefSeq:XP_015650098.1 | : | : |
Description
Similar to metal ion binding protein. (Os01t0595201-00)
Coordinates
chr1:+:23324460..23325125
Molecular Weight (calculated)
14587.7 Da
IEP (calculated)
7.589
GRAVY (calculated)
-0.332
Length
131 amino acids
Sequence
(BLAST)
(BLAST)
001: MAARGLKKAF RWFPHSNEDH HHLEEDEGSS ERRGLLRSHL EQVVPVTDLE DEPNASSSAV KEPKTVALKV SMHCHCCARK VEKQILKMEG VVSFKVELEN
101: KKVTVVGNVS PMEVLESICK VMKSAQILAA A
101: KKVTVVGNVS PMEVLESICK VMKSAQILAA A
001: MGKLQKIGRV WDCLFLPTNQ CSCFCLNTLG DEEEEFEKEP LIDSSTEKSG KVMRLKDVVA ADHRQTLAFH LKPKIVELKV SMHCYGCAKK VEKHISKLDG
101: VTWYKVELES KKVVVKGNIL PVDVLESICK VKNAQLWSSP
101: VTWYKVELES KKVVVKGNIL PVDVLESICK VKNAQLWSSP
Arabidopsis Description
Heavy metal transport/detoxification superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LHF4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.