Factsheet for Os08t0205400-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

extracellular: 18372294
plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 18372294 doi

T Aki, M Shigyo, R Nakano, T Yoneyama, S Yanagisawa

Department of Applied Biological Chemistry, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo, 113-8657 Japan.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0172600-00
Os04t0556000-01
Os06t0665800-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G66240.1	Os04t0556000-01	AT1G63440.1	16367966
AT1G66240.1	Os02t0172600-00	AT5G44790.1	17223078
AT1G66240.1	Os06t0665800-01	AT5G44790.1	17223078

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G342900.1	Wheat	cytosol	85.19	89.61
TraesCS7B01G247000.1	Wheat	cytosol	85.19	89.61
Bra029854.1-P	Field mustard	cytosol, plastid	77.78	82.89
CDY00957	Canola	cytosol, plastid	77.78	82.89
CDY08589	Canola	cytosol, plastid	77.78	82.89
Zm00001d031132_P002	Maize	cytosol	81.48	78.57
EES17440	Sorghum	cytosol, plastid	82.72	77.01
PGSC0003DMT400060399	Potato	cytosol, plastid	76.54	76.54
Solyc05g055310.2.1	Tomato	plastid	76.54	76.54
VIT_13s0074g00770.t01	Wine grape	cytosol	79.01	74.42
AT1G66240.1	Thale cress	cytosol, plastid	76.54	58.49
GSMUA_Achr6P07500_001	Banana	cytosol, plastid	80.25	58.04
PGSC0003DMT400050141	Potato	cytosol, plastid	75.31	57.55
Solyc11g007200.1.1	Tomato	extracellular	72.84	52.21
TraesCS7A01G335400.1	Wheat	cytosol	85.19	41.32
Os01t0719600-01	Rice	cytosol	39.51	22.54
Os01t0595201-00	Rice	cytosol	34.57	21.37
Os05t0534500-01	Rice	cytosol, mitochondrion	38.27	19.38
Os01t0976300-01	Rice	mitochondrion, plastid	46.91	18.63
Os03t0819400-01	Rice	plastid	43.21	17.24
Os08t0405700-01	Rice	mitochondrion	37.04	14.63

Protein Annotations

MapMan:25.5.2.3	Gene3D:3.30.70.100	EntrezGene:4344925	EMBL:AK243577	ProteinID:BAD05334.1	ProteinID:BAD11546.1
ProteinID:BAF23148.1	ProteinID:BAT04298.1	ProteinID:EAZ41860.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0008150	GO:GO:0009987
GO:GO:0019725	GO:GO:0030001	GO:GO:0046872	GO:GO:0046914	GO:GO:0046916	InterPro:HMA_dom
InterPro:HMA_dom_sf	InterPro:IPR006121	EnsemblPlantsGene:Os08g0205400	EnsemblPlants:Os08t0205400-01	PFAM:PF00403	PFscan:PS50846
PANTHER:PTHR22814	PANTHER:PTHR22814:SF172	UniProt:Q6ZCF3	SUPFAM:SSF55008	UniParc:UPI000022F1E6	RefSeq:XP_015648090.1

Description

Heavy metal transport/detoxification protein domain containing protein. (Os08t0205400-01)

Coordinates

chr8:+:6159123..6161383

Molecular Weight (calculated)

8500.2 Da

IEP (calculated)

6.549

GRAVY (calculated)

-0.025

Length

81 amino acids

Sequence
(BLAST)

1: MAETVVLRVG MSCEGCVGAV KRVLGKMQGV ESFDVDIKEQ KVTVKGNVTP DAVLQTVSKT GKKTSFWDAE PAPVEATAAS S

Best Arabidopsis Sequence Match ( AT1G66240.1 )
(BLAST)

001: MLKDLFQAVS YQNTASLSLF QALSVVESKA MSQTVVLRVA MTCEGCVGAV KRVLGKMEGV ESFDVDIKEQ KVTVKGNVQP DAVLQTVTKT GKKTAFWEAE
101: GETAKA

Arabidopsis Description

ATX1homolog of anti-oxidant 1 [Source:TAIR;Acc:AT1G66240]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.