Factsheet for Os04t0556000-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
plasma membrane 3
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os08t0205400-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G63440.1	Os08t0205400-01	AT1G66240.1	16367966

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G097010.1	Barley	plasma membrane	60.18	89.73
Zm00001d002708_P001	Maize	mitochondrion	89.02	89.29
TraesCS2B01G429200.2	Wheat	mitochondrion	87.43	88.13
EES11247	Sorghum	mitochondrion	87.92	87.92
TraesCS2D01G407800.5	Wheat	plastid	87.03	87.2
TraesCS2A01G410400.3	Wheat	mitochondrion	87.03	86.25
Zm00001d002705_P002	Maize	cytosol, plastid	84.03	81.27
GSMUA_Achr5P12290_001	Banana	plasma membrane	44.91	80.36
KXG26864	Sorghum	cytosol, plasma membrane, plastid	86.23	79.85
PGSC0003DMT400032161	Potato	cytosol, plasma membrane, vacuole	10.18	77.27
VIT_02s0025g03640.t01	Wine grape	golgi, peroxisome, plasma membrane	37.33	75.4
Solyc08g080870.2.1	Tomato	cytosol	69.36	72.85
CDX91834	Canola	cytosol, peroxisome, plasma membrane	59.58	69.58
GSMUA_Achr5P12300_001	Banana	cytosol	55.19	69.39
AT1G63440.1	Thale cress	mitochondrion	67.86	68.34
KRH27938	Soybean	plasma membrane	19.36	68.31
KRH77529	Soybean	cytosol	64.27	65.92
CDY50396	Canola	cytosol	63.77	65.67
CDY49160	Canola	cytosol	63.07	64.95
Bra003110.1-P	Field mustard	cytosol	63.17	64.79
CDY34353	Canola	mitochondrion	66.27	64.34
GSMUA_Achr1P00300_001	Banana	cytosol	56.09	63.94
CDY25498	Canola	mitochondrion	65.97	63.93
CDX93870	Canola	endoplasmic reticulum, plasma membrane	45.31	62.19
Bra027641.1-P	Field mustard	mitochondrion	67.17	56.46
Os06t0665800-01	Rice	cytosol	46.81	46.76
Os02t0172600-00	Rice	cytosol	46.61	46.65
Os08t0486100-01	Rice	cytosol, plasma membrane	7.29	36.5
VIT_02s0025g03630.t01	Wine grape	cytosol	70.06	36.26
Os03t0178100-00	Rice	plastid	26.05	28.94
Os06t0690700-01	Rice	plastid	18.56	22.63
Os07t0232900-01	Rice	cytosol, nucleus, plasma membrane	21.16	21.12
Os06t0700700-02	Rice	plasma membrane	20.36	19.12

Protein Annotations

Gene3D:2.70.150.20	MapMan:24.1.2.1.1	Gene3D:3.30.70.100	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	EntrezGene:4336625
UniProt:A3AWA4	EMBL:AB840272	InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf
ProteinID:BAF15436.2	ProteinID:BAS90429.1	ProteinID:BAS90430.1	ProteinID:CAD41643.2	ProteinID:EAZ31593.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005507	GO:GO:0005524
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0006811	GO:GO:0006812
GO:GO:0006950	GO:GO:0008150	GO:GO:0010273	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0019829	GO:GO:0030001	GO:GO:0046688	GO:GO:0046872	GO:GO:0099132	InterPro:HAD-like_sf
InterPro:HAD_sf	InterPro:HMA_Cu_ion-bd	InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:Heavy-metal-associated_CS	InterPro:IPR006121
InterPro:IPR023214	InterPro:IPR023299	EnsemblPlantsGene:Os04g0556000	EnsemblPlants:Os04t0556000-01	InterPro:P-typ_ATPase_IB	PFAM:PF00122
PFAM:PF00403	PFAM:PF00702	PRINTS:PR00119	PRINTS:PR00942	PRINTS:PR00943	ScanProsite:PS00154
ScanProsite:PS01047	PFscan:PS50846	PANTHER:PTHR24093	PANTHER:PTHR24093:SF417	InterPro:P_typ_ATPase	SUPFAM:SSF55008
SUPFAM:SSF56784	SUPFAM:SSF81653	SUPFAM:SSF81665	TIGRFAMs:TIGR00003	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01525
TMHMM:TMhelix	UniParc:UPI0000F18CBB	RefSeq:XP_015635938.1	SEG:seg	:	:

Description

HEAVY METAL ATPASE 5Heavy metal P-type ATPase, Xylem loading of copper (Os04t0556000-01);Similar to heavy metal ATPase. (Os04t0556000-02)

Coordinates

chr4:+:27829841..27835486

Molecular Weight (calculated)

107993.0 Da

IEP (calculated)

6.350

GRAVY (calculated)

0.144

Length

1002 amino acids

Sequence
(BLAST)

0001: MAASTRALFL SCFHGSGGGG GTSEVSRRLV LRPRYPSMPR RPRSAAVAGE GGEGGGGGGD GDLEAAAVGA EEEEKVAVFE VSGMTCAACA GSVEKAVKRL
0101: QGIHDAAVDV LGGRAQVVFY PAFVSEEKIR ETIQDVGFEA KLIDEEVKEK NILVCRLHIK GMTCTSCAST VESILQVVPG VQRASVALAT EEAEIRYDRR
0201: IVTASQLTHA VEETGFEAIL ITTGDDQSRI DLKVDGTLNE RSIMIVKSSV QALPGVEDIK VDPELHKITI SYKPDQTGPR DLIEVIESAA SGDLTVSIYP
0301: EADGRQQHRH GEIKRYRQSF LWSLVFTIPV FLTSMVFMYI PGLKDGLEKK VINMMSIGEL LRWILSTPVQ FVIGRRFYTG AYKALSHGSS NMDVLIALGT
0401: NTAYFYSVYS ILRAASSHNY MATDFFETSS MLISFILLGK YLEILAKGKT SEAIAKLMDL APETATMLIY DHEGNVVGEK EIDSRLIQKN DVIKVVPGGK
0501: VASDGFVIWG QSHVNESMIT GESRPVAKRK GDTVIGGTVN ENGVLHVRAT FVGSESALAQ IVRLVESAQM AKAPVQKFAD QISRVFVPLV IILSLLTWLA
0601: WFLAGRLHGY PNSWIPSSMD SFQLALQFGI SVMVIACPCA LGLATPTAVM VATGVGASQG VLIKGGQALE SAQKVDCIVF DKTGTLTIGK PVVVNTRLLK
0701: NMVLREFYAY VAAAEVNSEH PLGKAVVEHA KKFHSEESHV WTEARDFISV TGHGVKAKIS GRAVMVGNKS FMLTSGIDIP VEALEILTEE EEKAQTAIIV
0801: AMDQEVVGII SVSDPIKPNA REVISYLKSM KVESIMVTGD NWGTANAISK EVGIENTVAE AKPEQKAEKV KELQSAGRTV AMVGDGINDS PALVSADVGL
0901: AIGAGTDVAI EAADIVLMKS NLEDVITAID LSRKTFFRIR MNYVWALGYN IIGIPIAAGV LFPSTRFRLP PWVAGAAMAA SSVSVVCWSL LLRYYKSPKL
1001: GR

Best Arabidopsis Sequence Match ( AT1G63440.1 )
(BLAST)

001: MATKLLSLTC IRKERFSERY PLVRKHLTRS RDGGGGSSSE TAAFEIDDPI SRAVFQVLGM TCSACAGSVE KAIKRLPGIH DAVIDALNNR AQILFYPNSV
101: DVETIRETIE DAGFEASLIE NEANERSRQV CRIRINGMTC TSCSSTIERV LQSVNGVQRA HVALAIEEAE IHYDPRLSSY DRLLEEIENA GFEAVLISTG
201: EDVSKIDLKI DGELTDESMK VIERSLEALP GVQSVEISHG TDKISVLYKP DVTGPRNFIQ VIESTVFGHS GHIKATIFSE GGVGRESQKQ GEIKQYYKSF
301: LWSLVFTVPV FLTAMVFMYI PGIKDLLMFK VINMLTVGEI IRCVLATPVQ FVIGWRFYTG SYKALRRGSA NMDVLIALGT NAAYFYSLYT VLRAATSPDF
401: KGVDFFETSA MLISFIILGK YLEVMAKGKT SQAIAKLMNL APDTAILLSL DKEGNVTGEE EIDGRLIQKN DVIKIVPGAK VASDGYVIWG QSHVNESMIT
501: GEARPVAKRK GDTVIGGTLN ENGVLHVKVT RVGSESALAQ IVRLVESAQL AKAPVQKLAD RISKFFVPLV IFLSFSTWLA WFLAGKLHWY PESWIPSSMD
601: SFELALQFGI SVMVIACPCA LGLATPTAVM VGTGVGASQG VLIKGGQALE RAHKVNCIVF DKTGTLTMGK PVVVKTKLLK NMVLREFYEL VAATEVNSEH
701: PLAKAIVEYA KKFRDDEENP AWPEACDFVS ITGKGVKATV KGREIMVGNK NLMNDHKVII PDDAEELLAD SEDMAQTGIL VSINSELIGV LSVSDPLKPS
801: AREAISILKS MNIKSIMVTG DNWGTANSIA REVGIDSVIA EAKPEQKAEK VKELQAAGHV VAMVGDGIND SPALVAADVG MAIGAGTDIA IEAADIVLMK
901: SNLEDVITAI DLSRKTFSRI RLNYVWALGY NLMGIPIAAG VLFPGTRFRL PPWIAGAAMA ASSVSVVCCS LLLKNYKRPK KLDHLEIREI QVERV

Arabidopsis Description

HMA5Probable copper-transporting ATPase HMA5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SH30]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.