Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 6
- plasma membrane 1
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS7A01G335400.1 | |
| TraesCS7B01G247000.1 | |
| TraesCS7D01G342900.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G63440.1 | TraesCS7A01G335400.1 | AT1G66240.1 | 16367966 |
| AT1G63440.1 | TraesCS7B01G247000.1 | AT1G66240.1 | 16367966 |
| AT1G63440.1 | TraesCS7D01G342900.1 | AT1G66240.1 | 16367966 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G097010.1 | Barley | plasma membrane | 65.69 | 97.17 |
| TraesCS2A01G410400.3 | Wheat | mitochondrion | 97.99 | 96.34 |
| TraesCS2D01G407800.5 | Wheat | plastid | 95.37 | 94.8 |
| Zm00001d002708_P001 | Maize | mitochondrion | 88.13 | 87.69 |
| Os04t0556000-01 | Rice | plastid | 88.13 | 87.43 |
| EES11247 | Sorghum | mitochondrion | 87.83 | 87.13 |
| GSMUA_Achr5P12290_001 | Banana | plasma membrane | 45.27 | 80.36 |
| Zm00001d002705_P002 | Maize | cytosol, plastid | 83.4 | 80.02 |
| KXG26864 | Sorghum | cytosol, plasma membrane, plastid | 85.41 | 78.47 |
| PGSC0003DMT400032161 | Potato | cytosol, plasma membrane, vacuole | 10.26 | 77.27 |
| VIT_02s0025g03640.t01 | Wine grape | golgi, peroxisome, plasma membrane | 37.73 | 75.6 |
| Solyc08g080870.2.1 | Tomato | cytosol | 68.91 | 71.8 |
| GSMUA_Achr5P12300_001 | Banana | cytosol | 56.14 | 70.01 |
| CDX91834 | Canola | cytosol, peroxisome, plasma membrane | 59.36 | 68.76 |
| KRH27938 | Soybean | plasma membrane | 19.32 | 67.61 |
| AT1G63440.1 | Thale cress | mitochondrion | 67.3 | 67.24 |
| KRH77529 | Soybean | cytosol | 64.39 | 65.51 |
| GSMUA_Achr1P00300_001 | Banana | cytosol | 57.04 | 64.51 |
| CDY50396 | Canola | cytosol | 62.07 | 63.41 |
| CDY25498 | Canola | mitochondrion | 65.49 | 62.96 |
| CDY49160 | Canola | cytosol | 61.57 | 62.9 |
| CDY34353 | Canola | mitochondrion | 65.29 | 62.89 |
| Bra003110.1-P | Field mustard | cytosol | 61.57 | 62.64 |
| CDX93870 | Canola | endoplasmic reticulum, plasma membrane | 44.77 | 60.96 |
| Bra027641.1-P | Field mustard | mitochondrion | 66.6 | 55.54 |
| TraesCS6B01G192400.1 | Wheat | cytosol, plastid | 52.31 | 53.06 |
| TraesCS7B01G382300.1 | Wheat | cytosol | 46.88 | 46.55 |
| TraesCS6B01G184800.1 | Wheat | cytosol | 43.66 | 44.65 |
| VIT_02s0025g03630.t01 | Wine grape | cytosol | 70.42 | 36.16 |
| TraesCS4B01G293600.3 | Wheat | mitochondrion, plasma membrane | 23.24 | 31.47 |
| TraesCS7B01G135300.1 | Wheat | plastid | 27.26 | 28.47 |
| TraesCS7B01G320900.1 | Wheat | plasma membrane | 20.12 | 26.11 |
| TraesCS7B01G337700.1 | Wheat | extracellular, plasma membrane | 10.26 | 25.37 |
| TraesCS5B01G388000.1 | Wheat | plasma membrane | 20.93 | 25.09 |
| TraesCS7B01G320100.2 | Wheat | plasma membrane | 20.72 | 20.14 |
Protein Annotations
| Gene3D:2.70.150.20 | MapMan:24.1.2.1.1 | Gene3D:3.30.70.100 | Gene3D:3.40.1110.10 | Gene3D:3.40.50.1000 | InterPro:ATPase_P-typ_P_site |
| InterPro:ATPase_P-typ_TM_dom_sf | InterPro:ATPase_P-typ_cyto_dom_N | InterPro:ATPase_P-typ_transduc_dom_A_sf | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005507 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006812 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0019829 | GO:GO:0030001 |
| GO:GO:0046872 | InterPro:HAD-like_sf | InterPro:HAD_sf | InterPro:HMA_Cu_ion-bd | InterPro:HMA_dom | InterPro:HMA_dom_sf |
| InterPro:Heavy-metal-associated_CS | InterPro:IPR006121 | InterPro:IPR023214 | InterPro:IPR023299 | InterPro:P-typ_ATPase_IB | PFAM:PF00122 |
| PFAM:PF00403 | PFAM:PF00702 | PRINTS:PR00119 | PRINTS:PR00942 | PRINTS:PR00943 | ScanProsite:PS00154 |
| ScanProsite:PS01047 | PFscan:PS50846 | PANTHER:PTHR24093 | PANTHER:PTHR24093:SF417 | InterPro:P_typ_ATPase | SUPFAM:SSF55008 |
| SUPFAM:SSF56784 | SUPFAM:SSF81653 | SUPFAM:SSF81665 | TIGRFAMs:TIGR00003 | TIGRFAMs:TIGR01494 | TIGRFAMs:TIGR01525 |
| TMHMM:TMhelix | EnsemblPlantsGene:TraesCS2B01G429200 | EnsemblPlants:TraesCS2B01G429200.2 | TIGR:cd00371 | TIGR:cd02094 | SEG:seg |
Description
No Description!
Coordinates
chr2B:-:616494471..616499943
Molecular Weight (calculated)
107498.0 Da
IEP (calculated)
6.135
GRAVY (calculated)
0.181
Length
994 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAGTRALFL ACFRGGGGGG AEGSGHRLAL RPRYAPVPRR TKAAAVAGDL EAAAGAAEEE EEKVAVFQVT GMTCAACAGS VEKAVKRLPG IHDAAVDVLG
101: CRAQVAFYPA FVSEEKIRET IEDVGFGAKL IDEELKEKSI LVCRLHIKGM TCTSCANTVE SALQAVPGVQ RASVALAIEE AEIRYNRRVV AAIQLVNAVE
201: ESGFEAILVT AGEDRSRIDL KVDGILNERS VMIVKSSVQA LPGVEDIKIY TELQKITISY KPDQTGPRDL IEVIESAGSG HIAVSIYPEA DGREQHRNGE
301: ITRYRQSFLW SLLFTIPVFL TSMVFMYIPG LKDGLDKKVV NMMSIGELLR WILSTPVQFV IGRKFYTGAY KAMCHGSPNM DVLIALGTNT AYFYSVYSVL
401: RAATSENYMS TDFFETSSML ISFILLGKYL EILAKGKTSE AIAKLMDLAP ETATVLIYDN EGNVVNEKEI DSRLIQKNDV IKVIPGGKVA SDGFVIWGQS
501: HVNESMITGE SRPVAKRKGD TVIGGTVNEN GVLHVRATFV GSESALAQIV RLVESAQMAK APVQKFADQI SKVFVPLVIL LSLLTWLTWF LAGRFHGYPS
601: SWIPSSMDSF QLALQFGISV MVIACPCALG LATPTAVMVA TGVGASQGVL IKGGQALESA QKVDCIVFDK TGTLTIGKPI VVNTRLFKNM VLREFYDYVA
701: AAEDNSEHPL GKAIVEHAKK FHPEETHIWP EARDFISVTG HGVKAKISDK SVIVGNKSFM LSLDIDVPVE ASEILIEEEE KAHTGIIVAM DQEIVGIISV
801: SDPIKPNAHE VISYLKSMKV ECIMVTGDNW GTANAIGKEV GIENIIAEAK PEQKAEKVKE LQLSGKTVAM VGDGINDSPA LVAANVGMAI GAGTDVAIEA
901: ADIVLMKSNL EDVITAIDLS RKAFFRIRMN YVWALGYNII GIPIAAGVLF PSTRFRLPPW VAGAAMAASS VSVVCWSLLL RYYKRPLITQ ERQT
101: CRAQVAFYPA FVSEEKIRET IEDVGFGAKL IDEELKEKSI LVCRLHIKGM TCTSCANTVE SALQAVPGVQ RASVALAIEE AEIRYNRRVV AAIQLVNAVE
201: ESGFEAILVT AGEDRSRIDL KVDGILNERS VMIVKSSVQA LPGVEDIKIY TELQKITISY KPDQTGPRDL IEVIESAGSG HIAVSIYPEA DGREQHRNGE
301: ITRYRQSFLW SLLFTIPVFL TSMVFMYIPG LKDGLDKKVV NMMSIGELLR WILSTPVQFV IGRKFYTGAY KAMCHGSPNM DVLIALGTNT AYFYSVYSVL
401: RAATSENYMS TDFFETSSML ISFILLGKYL EILAKGKTSE AIAKLMDLAP ETATVLIYDN EGNVVNEKEI DSRLIQKNDV IKVIPGGKVA SDGFVIWGQS
501: HVNESMITGE SRPVAKRKGD TVIGGTVNEN GVLHVRATFV GSESALAQIV RLVESAQMAK APVQKFADQI SKVFVPLVIL LSLLTWLTWF LAGRFHGYPS
601: SWIPSSMDSF QLALQFGISV MVIACPCALG LATPTAVMVA TGVGASQGVL IKGGQALESA QKVDCIVFDK TGTLTIGKPI VVNTRLFKNM VLREFYDYVA
701: AAEDNSEHPL GKAIVEHAKK FHPEETHIWP EARDFISVTG HGVKAKISDK SVIVGNKSFM LSLDIDVPVE ASEILIEEEE KAHTGIIVAM DQEIVGIISV
801: SDPIKPNAHE VISYLKSMKV ECIMVTGDNW GTANAIGKEV GIENIIAEAK PEQKAEKVKE LQLSGKTVAM VGDGINDSPA LVAANVGMAI GAGTDVAIEA
901: ADIVLMKSNL EDVITAIDLS RKAFFRIRMN YVWALGYNII GIPIAAGVLF PSTRFRLPPW VAGAAMAASS VSVVCWSLLL RYYKRPLITQ ERQT
001: MATKLLSLTC IRKERFSERY PLVRKHLTRS RDGGGGSSSE TAAFEIDDPI SRAVFQVLGM TCSACAGSVE KAIKRLPGIH DAVIDALNNR AQILFYPNSV
101: DVETIRETIE DAGFEASLIE NEANERSRQV CRIRINGMTC TSCSSTIERV LQSVNGVQRA HVALAIEEAE IHYDPRLSSY DRLLEEIENA GFEAVLISTG
201: EDVSKIDLKI DGELTDESMK VIERSLEALP GVQSVEISHG TDKISVLYKP DVTGPRNFIQ VIESTVFGHS GHIKATIFSE GGVGRESQKQ GEIKQYYKSF
301: LWSLVFTVPV FLTAMVFMYI PGIKDLLMFK VINMLTVGEI IRCVLATPVQ FVIGWRFYTG SYKALRRGSA NMDVLIALGT NAAYFYSLYT VLRAATSPDF
401: KGVDFFETSA MLISFIILGK YLEVMAKGKT SQAIAKLMNL APDTAILLSL DKEGNVTGEE EIDGRLIQKN DVIKIVPGAK VASDGYVIWG QSHVNESMIT
501: GEARPVAKRK GDTVIGGTLN ENGVLHVKVT RVGSESALAQ IVRLVESAQL AKAPVQKLAD RISKFFVPLV IFLSFSTWLA WFLAGKLHWY PESWIPSSMD
601: SFELALQFGI SVMVIACPCA LGLATPTAVM VGTGVGASQG VLIKGGQALE RAHKVNCIVF DKTGTLTMGK PVVVKTKLLK NMVLREFYEL VAATEVNSEH
701: PLAKAIVEYA KKFRDDEENP AWPEACDFVS ITGKGVKATV KGREIMVGNK NLMNDHKVII PDDAEELLAD SEDMAQTGIL VSINSELIGV LSVSDPLKPS
801: AREAISILKS MNIKSIMVTG DNWGTANSIA REVGIDSVIA EAKPEQKAEK VKELQAAGHV VAMVGDGIND SPALVAADVG MAIGAGTDIA IEAADIVLMK
901: SNLEDVITAI DLSRKTFSRI RLNYVWALGY NLMGIPIAAG VLFPGTRFRL PPWIAGAAMA ASSVSVVCCS LLLKNYKRPK KLDHLEIREI QVERV
101: DVETIRETIE DAGFEASLIE NEANERSRQV CRIRINGMTC TSCSSTIERV LQSVNGVQRA HVALAIEEAE IHYDPRLSSY DRLLEEIENA GFEAVLISTG
201: EDVSKIDLKI DGELTDESMK VIERSLEALP GVQSVEISHG TDKISVLYKP DVTGPRNFIQ VIESTVFGHS GHIKATIFSE GGVGRESQKQ GEIKQYYKSF
301: LWSLVFTVPV FLTAMVFMYI PGIKDLLMFK VINMLTVGEI IRCVLATPVQ FVIGWRFYTG SYKALRRGSA NMDVLIALGT NAAYFYSLYT VLRAATSPDF
401: KGVDFFETSA MLISFIILGK YLEVMAKGKT SQAIAKLMNL APDTAILLSL DKEGNVTGEE EIDGRLIQKN DVIKIVPGAK VASDGYVIWG QSHVNESMIT
501: GEARPVAKRK GDTVIGGTLN ENGVLHVKVT RVGSESALAQ IVRLVESAQL AKAPVQKLAD RISKFFVPLV IFLSFSTWLA WFLAGKLHWY PESWIPSSMD
601: SFELALQFGI SVMVIACPCA LGLATPTAVM VGTGVGASQG VLIKGGQALE RAHKVNCIVF DKTGTLTMGK PVVVKTKLLK NMVLREFYEL VAATEVNSEH
701: PLAKAIVEYA KKFRDDEENP AWPEACDFVS ITGKGVKATV KGREIMVGNK NLMNDHKVII PDDAEELLAD SEDMAQTGIL VSINSELIGV LSVSDPLKPS
801: AREAISILKS MNIKSIMVTG DNWGTANSIA REVGIDSVIA EAKPEQKAEK VKELQAAGHV VAMVGDGIND SPALVAADVG MAIGAGTDIA IEAADIVLMK
901: SNLEDVITAI DLSRKTFSRI RLNYVWALGY NLMGIPIAAG VLFPGTRFRL PPWIAGAAMA ASSVSVVCCS LLLKNYKRPK KLDHLEIREI QVERV
Arabidopsis Description
HMA5Probable copper-transporting ATPase HMA5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SH30]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.