Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS7A01G335400.1 | |
| TraesCS7B01G247000.1 | |
| TraesCS7D01G342900.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G44790.1 | TraesCS7A01G335400.1 | AT1G66240.1 | 17223078 |
| AT5G44790.1 | TraesCS7B01G247000.1 | AT1G66240.1 | 17223078 |
| AT5G44790.1 | TraesCS7D01G342900.1 | AT1G66240.1 | 17223078 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G146500.1 | Wheat | cytosol | 98.66 | 96.09 |
| TraesCS6A01G156900.1 | Wheat | cytosol | 98.25 | 95.79 |
| EES06348 | Sorghum | cytosol | 86.32 | 84.15 |
| Os02t0172600-00 | Rice | cytosol | 86.63 | 84.12 |
| Zm00001d053783_P001 | Maize | plasma membrane | 85.29 | 83.07 |
| HORVU6Hr1G031960.1 | Barley | plastid | 47.74 | 80.84 |
| TraesCS7B01G382300.1 | Wheat | cytosol | 82.72 | 80.32 |
| GSMUA_Achr8P06970_001 | Banana | cytosol | 72.43 | 74.58 |
| GSMUA_Achr5P26800_001 | Banana | cytosol | 71.09 | 73.82 |
| VIT_01s0011g01360.t01 | Wine grape | cytosol | 69.86 | 67.9 |
| KRH37212 | Soybean | cytosol | 68.21 | 67.24 |
| KRH12191 | Soybean | cytosol | 68.83 | 67.17 |
| KRH58516 | Soybean | cytosol | 68.52 | 67.0 |
| KRH42397 | Soybean | cytosol | 67.9 | 66.4 |
| AT5G44790.1 | Thale cress | cytosol | 68.0 | 66.03 |
| Solyc02g068490.2.1 | Tomato | cytosol | 68.11 | 66.0 |
| PGSC0003DMT400024409 | Potato | cytosol | 67.8 | 65.77 |
| CDY50771 | Canola | cytosol | 67.18 | 65.69 |
| CDY39400 | Canola | cytosol | 67.08 | 65.27 |
| Bra025102.1-P | Field mustard | cytosol | 66.56 | 64.89 |
| CDY26408 | Canola | golgi, nucleus, plasma membrane | 11.52 | 64.74 |
| Bra027573.1-P | Field mustard | cytosol | 64.61 | 62.67 |
| CDY69037 | Canola | cytosol | 36.52 | 60.79 |
| CDY67984 | Canola | cytosol, peroxisome, plasma membrane | 15.12 | 60.0 |
| CDY67659 | Canola | cytosol | 36.63 | 59.83 |
| TraesCS2B01G429200.2 | Wheat | mitochondrion | 44.65 | 43.66 |
| TraesCS6B01G192400.1 | Wheat | cytosol, plastid | 42.59 | 42.24 |
| TraesCS4B01G293600.3 | Wheat | mitochondrion, plasma membrane | 22.22 | 29.43 |
| TraesCS7B01G135300.1 | Wheat | plastid | 27.88 | 28.47 |
| TraesCS7B01G320900.1 | Wheat | plasma membrane | 19.86 | 25.2 |
| TraesCS5B01G388000.1 | Wheat | plasma membrane | 20.37 | 23.88 |
| TraesCS7B01G337700.1 | Wheat | extracellular, plasma membrane | 9.05 | 21.89 |
| TraesCS7B01G320100.2 | Wheat | plasma membrane | 20.88 | 19.84 |
Protein Annotations
| Gene3D:2.70.150.20 | MapMan:24.1.2.1.1 | Gene3D:3.30.70.100 | Gene3D:3.40.1110.10 | Gene3D:3.40.50.1000 | InterPro:ATPase_P-typ_P_site |
| InterPro:ATPase_P-typ_TM_dom_sf | InterPro:ATPase_P-typ_cyto_dom_N | InterPro:ATPase_P-typ_transduc_dom_A_sf | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005507 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006812 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0019829 | GO:GO:0030001 |
| GO:GO:0046872 | InterPro:HAD-like_sf | InterPro:HAD_sf | InterPro:HMA_Cu_ion-bd | InterPro:HMA_dom | InterPro:HMA_dom_sf |
| InterPro:Heavy-metal-associated_CS | InterPro:IPR006121 | InterPro:IPR023214 | InterPro:IPR023299 | InterPro:P-typ_ATPase_IB | PFAM:PF00122 |
| PFAM:PF00403 | PFAM:PF00702 | PRINTS:PR00119 | PRINTS:PR00942 | ScanProsite:PS00154 | ScanProsite:PS01047 |
| PFscan:PS50846 | PANTHER:PTHR43520 | PANTHER:PTHR43520:SF14 | InterPro:P_typ_ATPase | SUPFAM:SSF55008 | SUPFAM:SSF56784 |
| SUPFAM:SSF81653 | SUPFAM:SSF81665 | TIGRFAMs:TIGR00003 | TIGRFAMs:TIGR01494 | TIGRFAMs:TIGR01525 | TMHMM:TMhelix |
| EnsemblPlantsGene:TraesCS6B01G184800 | EnsemblPlants:TraesCS6B01G184800.1 | TIGR:cd00371 | TIGR:cd02094 | SEG:seg | : |
Description
No Description!
Coordinates
chr6B:+:207923884..207929181
Molecular Weight (calculated)
104700.0 Da
IEP (calculated)
5.500
GRAVY (calculated)
0.291
Length
972 amino acids
Sequence
(BLAST)
(BLAST)
001: MAHLQLTAVA GGRDDDMEEV ALLGSYGEAE GPSSRKGEEE EEEAGMRRAQ VRVTGMTCSA CTGAVEAALS ARRGVRSAAV SLLQNRAHVV FDPALAKEED
101: IVEAIEDAGF EAEILPDSAV SQPKSQKALS GQFRIGGMTC AACVNSVEGI LKKLPGVNRA VVALATSLGE VEYDPTAISK DDIVQAIEDA GFEAALVQSS
201: EQDKALLGLI GLHTERDVNL LYDILRKTEG LRQFDVNSVR AEVEITFDPE VVGLRSVVDI IEMESSGRLK AHVQNPYVRS SSNDAQEASK MLHLLRSSLF
301: LSIPVFFMRM VCPHISFINS ILLMHCGPFR IGDLLKWMLV SVVQFVVGKR FYIAAYRALR HGSTNMDVLV VLGTTATYVY SVCALLYGAF TGFHPPMYFE
401: TSAMIITFVL LGKYLEVLAK GRTSDAIKKL VELVPATAIL LLKYKDGKYA GEKEIDALLI QPGDVLKVLP GSKIPADGIV TWGTSHVDES MVTGESASIC
501: KEVSSSVIGG TMNLNGILHI QAAKVGSGTV LSQIISLVET AQMSKAPIQK FADYVAGIFV PIVITLSLLT FCTWFVCGTL GAYPNSWVSE TSNCFVFSLM
601: FSISVVVIAC PCALGLATPT AVMVATGVGA NHGVLVKGGD ALERAQNVNY IIFDKTGTLT QGKATVTTTK VFSGMDVGDF LTLVASAEAS SEHPLAKAIL
701: DYAFHFHFFG KLSSSKDDVK KRKEDAFSQW LLEVADFSAL PGKGVQCLIN GKMILVGNRA LISENGVNIP EEAESFLVDM ELSAKTGILV AYDGDFIGLM
801: GVTDPLKREA AVVIQGLKKM GIYPVMVTGD NWRTALAVAK EIGIEDVRAE VMPAGKADVI RSFQKDGSVV AMVGEADYVL VRNNLEDVIT AIDLSRKTFS
901: RIRWNYFFAM AYNIVAIPVA AGALFPFTGL QMPPWLAGAC MAFSSVSVVC SSLLLRRYRK PRLTTVLQIT VE
101: IVEAIEDAGF EAEILPDSAV SQPKSQKALS GQFRIGGMTC AACVNSVEGI LKKLPGVNRA VVALATSLGE VEYDPTAISK DDIVQAIEDA GFEAALVQSS
201: EQDKALLGLI GLHTERDVNL LYDILRKTEG LRQFDVNSVR AEVEITFDPE VVGLRSVVDI IEMESSGRLK AHVQNPYVRS SSNDAQEASK MLHLLRSSLF
301: LSIPVFFMRM VCPHISFINS ILLMHCGPFR IGDLLKWMLV SVVQFVVGKR FYIAAYRALR HGSTNMDVLV VLGTTATYVY SVCALLYGAF TGFHPPMYFE
401: TSAMIITFVL LGKYLEVLAK GRTSDAIKKL VELVPATAIL LLKYKDGKYA GEKEIDALLI QPGDVLKVLP GSKIPADGIV TWGTSHVDES MVTGESASIC
501: KEVSSSVIGG TMNLNGILHI QAAKVGSGTV LSQIISLVET AQMSKAPIQK FADYVAGIFV PIVITLSLLT FCTWFVCGTL GAYPNSWVSE TSNCFVFSLM
601: FSISVVVIAC PCALGLATPT AVMVATGVGA NHGVLVKGGD ALERAQNVNY IIFDKTGTLT QGKATVTTTK VFSGMDVGDF LTLVASAEAS SEHPLAKAIL
701: DYAFHFHFFG KLSSSKDDVK KRKEDAFSQW LLEVADFSAL PGKGVQCLIN GKMILVGNRA LISENGVNIP EEAESFLVDM ELSAKTGILV AYDGDFIGLM
801: GVTDPLKREA AVVIQGLKKM GIYPVMVTGD NWRTALAVAK EIGIEDVRAE VMPAGKADVI RSFQKDGSVV AMVGEADYVL VRNNLEDVIT AIDLSRKTFS
901: RIRWNYFFAM AYNIVAIPVA AGALFPFTGL QMPPWLAGAC MAFSSVSVVC SSLLLRRYRK PRLTTVLQIT VE
001: MATKLLSLTC IRKERFSERY PLVRKHLTRS RDGGGGSSSE TAAFEIDDPI SRAVFQVLGM TCSACAGSVE KAIKRLPGIH DAVIDALNNR AQILFYPNSV
101: DVETIRETIE DAGFEASLIE NEANERSRQV CRIRINGMTC TSCSSTIERV LQSVNGVQRA HVALAIEEAE IHYDPRLSSY DRLLEEIENA GFEAVLISTG
201: EDVSKIDLKI DGELTDESMK VIERSLEALP GVQSVEISHG TDKISVLYKP DVTGPRNFIQ VIESTVFGHS GHIKATIFSE GGVGRESQKQ GEIKQYYKSF
301: LWSLVFTVPV FLTAMVFMYI PGIKDLLMFK VINMLTVGEI IRCVLATPVQ FVIGWRFYTG SYKALRRGSA NMDVLIALGT NAAYFYSLYT VLRAATSPDF
401: KGVDFFETSA MLISFIILGK YLEVMAKGKT SQAIAKLMNL APDTAILLSL DKEGNVTGEE EIDGRLIQKN DVIKIVPGAK VASDGYVIWG QSHVNESMIT
501: GEARPVAKRK GDTVIGGTLN ENGVLHVKVT RVGSESALAQ IVRLVESAQL AKAPVQKLAD RISKFFVPLV IFLSFSTWLA WFLAGKLHWY PESWIPSSMD
601: SFELALQFGI SVMVIACPCA LGLATPTAVM VGTGVGASQG VLIKGGQALE RAHKVNCIVF DKTGTLTMGK PVVVKTKLLK NMVLREFYEL VAATEVNSEH
701: PLAKAIVEYA KKFRDDEENP AWPEACDFVS ITGKGVKATV KGREIMVGNK NLMNDHKVII PDDAEELLAD SEDMAQTGIL VSINSELIGV LSVSDPLKPS
801: AREAISILKS MNIKSIMVTG DNWGTANSIA REVGIDSVIA EAKPEQKAEK VKELQAAGHV VAMVGDGIND SPALVAADVG MAIGAGTDIA IEAADIVLMK
901: SNLEDVITAI DLSRKTFSRI RLNYVWALGY NLMGIPIAAG VLFPGTRFRL PPWIAGAAMA ASSVSVVCCS LLLKNYKRPK KLDHLEIREI QVERV
101: DVETIRETIE DAGFEASLIE NEANERSRQV CRIRINGMTC TSCSSTIERV LQSVNGVQRA HVALAIEEAE IHYDPRLSSY DRLLEEIENA GFEAVLISTG
201: EDVSKIDLKI DGELTDESMK VIERSLEALP GVQSVEISHG TDKISVLYKP DVTGPRNFIQ VIESTVFGHS GHIKATIFSE GGVGRESQKQ GEIKQYYKSF
301: LWSLVFTVPV FLTAMVFMYI PGIKDLLMFK VINMLTVGEI IRCVLATPVQ FVIGWRFYTG SYKALRRGSA NMDVLIALGT NAAYFYSLYT VLRAATSPDF
401: KGVDFFETSA MLISFIILGK YLEVMAKGKT SQAIAKLMNL APDTAILLSL DKEGNVTGEE EIDGRLIQKN DVIKIVPGAK VASDGYVIWG QSHVNESMIT
501: GEARPVAKRK GDTVIGGTLN ENGVLHVKVT RVGSESALAQ IVRLVESAQL AKAPVQKLAD RISKFFVPLV IFLSFSTWLA WFLAGKLHWY PESWIPSSMD
601: SFELALQFGI SVMVIACPCA LGLATPTAVM VGTGVGASQG VLIKGGQALE RAHKVNCIVF DKTGTLTMGK PVVVKTKLLK NMVLREFYEL VAATEVNSEH
701: PLAKAIVEYA KKFRDDEENP AWPEACDFVS ITGKGVKATV KGREIMVGNK NLMNDHKVII PDDAEELLAD SEDMAQTGIL VSINSELIGV LSVSDPLKPS
801: AREAISILKS MNIKSIMVTG DNWGTANSIA REVGIDSVIA EAKPEQKAEK VKELQAAGHV VAMVGDGIND SPALVAADVG MAIGAGTDIA IEAADIVLMK
901: SNLEDVITAI DLSRKTFSRI RLNYVWALGY NLMGIPIAAG VLFPGTRFRL PPWIAGAAMA ASSVSVVCCS LLLKNYKRPK KLDHLEIREI QVERV
Arabidopsis Description
HMA5Probable copper-transporting ATPase HMA5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SH30]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.