Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- plasma membrane 2
- plastid 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| GSMUA_Achr6P07500_001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G44790.1 | GSMUA_Achr6P07500_001 | AT1G66240.1 | 17223078 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P26800_001 | Banana | cytosol | 82.52 | 83.23 |
| EES06348 | Sorghum | cytosol | 79.03 | 74.82 |
| KXG20553 | Sorghum | plasma membrane | 79.03 | 74.08 |
| Zm00001d053783_P001 | Maize | plasma membrane | 77.97 | 73.75 |
| Os06t0665800-01 | Rice | cytosol | 78.28 | 73.68 |
| TraesCS6D01G146500.1 | Wheat | cytosol | 77.86 | 73.65 |
| TraesCS7B01G382300.1 | Wheat | cytosol | 78.07 | 73.63 |
| TraesCS7A01G480100.1 | Wheat | cytosol | 78.07 | 73.63 |
| TraesCS6A01G156900.1 | Wheat | cytosol | 77.75 | 73.62 |
| Os02t0172600-00 | Rice | cytosol | 77.86 | 73.43 |
| TraesCS7D01G467100.1 | Wheat | cytosol | 77.75 | 73.33 |
| Zm00001d027860_P001 | Maize | plasma membrane | 13.03 | 73.21 |
| TraesCS6B01G184800.1 | Wheat | cytosol | 74.58 | 72.43 |
| CDY67984 | Canola | cytosol, peroxisome, plasma membrane | 18.64 | 71.84 |
| Zm00001d011553_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 13.88 | 71.58 |
| HORVU7Hr1G108890.1 | Barley | cytosol, mitochondrion | 76.06 | 70.19 |
| VIT_01s0011g01360.t01 | Wine grape | cytosol | 73.62 | 69.5 |
| KRH37212 | Soybean | cytosol | 70.44 | 67.44 |
| Zm00001d046953_P002 | Maize | cytosol, endoplasmic reticulum, plasma membrane | 73.41 | 67.02 |
| KRH12191 | Soybean | cytosol | 70.55 | 66.87 |
| KRH58516 | Soybean | cytosol | 70.13 | 66.6 |
| CDY26408 | Canola | golgi, nucleus, plasma membrane | 12.18 | 66.47 |
| KRH42397 | Soybean | cytosol | 69.81 | 66.3 |
| CDY50771 | Canola | cytosol | 69.49 | 66.0 |
| AT5G44790.1 | Thale cress | cytosol | 69.81 | 65.83 |
| CDY39400 | Canola | cytosol | 69.6 | 65.77 |
| Solyc02g068490.2.1 | Tomato | cytosol | 69.49 | 65.4 |
| Bra025102.1-P | Field mustard | cytosol | 69.07 | 65.4 |
| PGSC0003DMT400024409 | Potato | cytosol | 69.39 | 65.37 |
| Bra027573.1-P | Field mustard | cytosol | 67.27 | 63.37 |
| CDY69037 | Canola | cytosol | 35.91 | 58.05 |
| GSMUA_Achr5P12290_001 | Banana | plasma membrane | 34.11 | 57.5 |
| CDY67659 | Canola | cytosol | 35.91 | 56.97 |
| HORVU6Hr1G031960.1 | Barley | plastid | 33.26 | 54.7 |
| GSMUA_Achr5P12300_001 | Banana | cytosol | 40.36 | 47.8 |
| GSMUA_Achr3P11880_001 | Banana | cytosol | 44.28 | 46.19 |
| GSMUA_Achr1P00300_001 | Banana | cytosol | 41.21 | 44.25 |
| GSMUA_Achr7P12640_001 | Banana | cytosol | 29.77 | 33.65 |
| GSMUA_Achr8P30620_001 | Banana | cytosol | 27.33 | 32.09 |
| GSMUA_Achr4P30180_001 | Banana | plasma membrane | 22.14 | 27.36 |
| GSMUA_Achr5P22660_001 | Banana | plasma membrane | 22.46 | 25.95 |
| GSMUA_Achr5P21940_001 | Banana | extracellular, plasma membrane | 22.99 | 23.21 |
| GSMUA_Achr8P24660_001 | Banana | cytosol | 22.03 | 22.1 |
| GSMUA_Achr9P16140_001 | Banana | plastid | 18.22 | 19.98 |
Protein Annotations
| Gene3D:2.70.150.20 | MapMan:24.1.2.1.1 | Gene3D:3.30.70.100 | Gene3D:3.40.1110.10 | Gene3D:3.40.50.1000 | InterPro:ATPase_P-typ_P_site |
| InterPro:ATPase_P-typ_TM_dom_sf | InterPro:ATPase_P-typ_cyto_dom_N | InterPro:ATPase_P-typ_transduc_dom_A_sf | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005507 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006812 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0019829 | GO:GO:0030001 |
| GO:GO:0046872 | GO:GO:0099132 | EnsemblPlantsGene:GSMUA_Achr8G06970_001 | EnsemblPlants:GSMUA_Achr8P06970_001 | EnsemblPlants:GSMUA_Achr8T06970_001 | InterPro:HAD-like_sf |
| InterPro:HAD_sf | InterPro:HMA_Cu_ion-bd | InterPro:HMA_dom | InterPro:HMA_dom_sf | InterPro:Heavy-metal-associated_CS | InterPro:IPR006121 |
| InterPro:IPR023214 | InterPro:IPR023299 | UniProt:M0TNA0 | InterPro:P-typ_ATPase_IB | PFAM:PF00122 | PFAM:PF00403 |
| PFAM:PF00702 | PRINTS:PR00119 | PRINTS:PR00120 | ScanProsite:PS00154 | ScanProsite:PS01047 | PFscan:PS50846 |
| PANTHER:PTHR43520 | PANTHER:PTHR43520:SF14 | InterPro:P_typ_ATPase | SUPFAM:SSF55008 | SUPFAM:SSF56784 | SUPFAM:SSF81653 |
| SUPFAM:SSF81665 | TIGRFAMs:TIGR00003 | TIGRFAMs:TIGR01494 | TIGRFAMs:TIGR01525 | TMHMM:TMhelix | UniParc:UPI0002956458 |
| SEG:seg | : | : | : | : | : |
Description
Copper-transporting ATPase RAN1 [Source:GMGC_GENE;Acc:GSMUA_Achr8G06970_001]
Coordinates
chr8:+:4523846..4531428
Molecular Weight (calculated)
100962.0 Da
IEP (calculated)
5.574
GRAVY (calculated)
0.414
Length
944 amino acids
Sequence
(BLAST)
(BLAST)
001: MTCSACTASV EGAISTLPGV ARASVSLLQN KAHVVFDPSL VKDEDIRDAI EDAGFEAEVL PESNNSQTRS QKTLSGQFRI GGMTCSACVN SIEGILSKLP
101: GVKRAVVALA TSLGEVEYDP SVIRKEEIVN AIEDAGFDAA FLQSSEQDKA LLSVAGLSSE IDVHVIQGIL RDLKGVRQFA MSSSLSEVEV IFDPEAIGLR
201: SIVDSIEQGS NGKLKASVQS PYTLAASNHV EEASKMLRLF LSSLILSIPV FFIRMVCPHI VFLSSFLVMH CGPFLMSDVL KWILVSLVQF VVGKRFYVAA
301: YKALKHWSTN MDVLVVLGTS ASYFYSVSAL FYGAFTGFHA PVYFETSAMI ITFVLLGKYL EVVAKGKTSD AIKKLVELAP ATALLLVKDE EGRYVGEREI
401: DASLIQPGDI LKVLPGSKIP SDGIVVWGTS HANESMVTGE SLPVSKEVSS AVIGGTMNLH GALHIRATRV GSSTVLSQII SLVETAQMSK APIQKFADYV
501: AGIFVPIVIT LSLLTFLGWF FCGMLGAYPD SWVKESSNCF VFALMFSISV VVIACPCALG LATPTAVMVA TGMGASHGVL IKGGDALEKA QTVQYVVFDK
601: TGTLTQGKAA VSTAKVFAEM GLGDFLTLVA SAEASSEHPL ARAVVDYAHH YHFFDELPTV KGATKQIRED ILSEWLLEAI NFSALPGRGV QCLINGKRVL
701: VGNRALLAEN GVIVTKEAED FLIDLEVNAK TGVLVAYDGT FIGLLGIADP MKREAAVVIE GLKKMGIQPV MVTGDNWRTA QAVAKEIGIE DVRAEVMPAG
801: KAEVIRSLQK DGSMVAMVGD GINDSPALAA ADVGMAIGAG TDIAIEAADY VLVRNSLEDV ITAIDLSRKT FARIRWNYFF AMAYNVVAIP IAAGVLFPVT
901: GLRMPPWLAG ACMALSSVSV VCSSLLLRRY RKPRLTTILQ LTVE
101: GVKRAVVALA TSLGEVEYDP SVIRKEEIVN AIEDAGFDAA FLQSSEQDKA LLSVAGLSSE IDVHVIQGIL RDLKGVRQFA MSSSLSEVEV IFDPEAIGLR
201: SIVDSIEQGS NGKLKASVQS PYTLAASNHV EEASKMLRLF LSSLILSIPV FFIRMVCPHI VFLSSFLVMH CGPFLMSDVL KWILVSLVQF VVGKRFYVAA
301: YKALKHWSTN MDVLVVLGTS ASYFYSVSAL FYGAFTGFHA PVYFETSAMI ITFVLLGKYL EVVAKGKTSD AIKKLVELAP ATALLLVKDE EGRYVGEREI
401: DASLIQPGDI LKVLPGSKIP SDGIVVWGTS HANESMVTGE SLPVSKEVSS AVIGGTMNLH GALHIRATRV GSSTVLSQII SLVETAQMSK APIQKFADYV
501: AGIFVPIVIT LSLLTFLGWF FCGMLGAYPD SWVKESSNCF VFALMFSISV VVIACPCALG LATPTAVMVA TGMGASHGVL IKGGDALEKA QTVQYVVFDK
601: TGTLTQGKAA VSTAKVFAEM GLGDFLTLVA SAEASSEHPL ARAVVDYAHH YHFFDELPTV KGATKQIRED ILSEWLLEAI NFSALPGRGV QCLINGKRVL
701: VGNRALLAEN GVIVTKEAED FLIDLEVNAK TGVLVAYDGT FIGLLGIADP MKREAAVVIE GLKKMGIQPV MVTGDNWRTA QAVAKEIGIE DVRAEVMPAG
801: KAEVIRSLQK DGSMVAMVGD GINDSPALAA ADVGMAIGAG TDIAIEAADY VLVRNSLEDV ITAIDLSRKT FARIRWNYFF AMAYNVVAIP IAAGVLFPVT
901: GLRMPPWLAG ACMALSSVSV VCSSLLLRRY RKPRLTTILQ LTVE
0001: MAPSRRDLQL TPVTGGSSSQ ISDMEEVGLL DSYHNEANAD DILTKIEEGR DVSGLRKIQV GVTGMTCAAC SNSVEAALMN VNGVFKASVA LLQNRADVVF
0101: DPNLVKEEDI KEAIEDAGFE AEILAEEQTQ ATLVGQFTIG GMTCAACVNS VEGILRDLPG VKRAVVALST SLGEVEYDPN VINKDDIVNA IEDAGFEGSL
0201: VQSNQQDKLV LRVDGILNEL DAQVLEGILT RLNGVRQFRL DRISGELEVV FDPEVVSSRS LVDGIEEDGF GKFKLRVMSP YERLSSKDTG EASNMFRRFI
0301: SSLVLSIPLF FIQVICPHIA LFDALLVWRC GPFMMGDWLK WALVSVIQFV IGKRFYVAAW RALRNGSTNM DVLVALGTSA SYFYSVGALL YGAVTGFWSP
0401: TYFDASAMLI TFVLLGKYLE SLAKGKTSDA MKKLVQLTPA TAILLTEGKG GKLVGEREID ALLIQPGDTL KVHPGAKIPA DGVVVWGSSY VNESMVTGES
0501: VPVSKEVDSP VIGGTINMHG ALHMKATKVG SDAVLSQIIS LVETAQMSKA PIQKFADYVA SIFVPVVITL ALFTLVGWSI GGAVGAYPDE WLPENGTHFV
0601: FSLMFSISVV VIACPCALGL ATPTAVMVAT GVGATNGVLI KGGDALEKAH KVKYVIFDKT GTLTQGKATV TTTKVFSEMD RGEFLTLVAS AEASSEHPLA
0701: KAIVAYARHF HFFDESTEDG ETNNKDLQNS GWLLDTSDFS ALPGKGIQCL VNEKMILVGN RKLMSENAIN IPDHVEKFVE DLEESGKTGV IVAYNGKLVG
0801: VMGIADPLKR EAALVVEGLL RMGVRPIMVT GDNWRTARAV AKEVGIEDVR AEVMPAGKAD VIRSLQKDGS TVAMVGDGIN DSPALAAADV GMAIGAGTDV
0901: AIEAADYVLM RNNLEDVITA IDLSRKTLTR IRLNYVFAMA YNVVSIPIAA GVFFPVLRVQ LPPWAAGACM ALSSVSVVCS SLLLRRYKKP RLTTVLKITT
1001: E
0101: DPNLVKEEDI KEAIEDAGFE AEILAEEQTQ ATLVGQFTIG GMTCAACVNS VEGILRDLPG VKRAVVALST SLGEVEYDPN VINKDDIVNA IEDAGFEGSL
0201: VQSNQQDKLV LRVDGILNEL DAQVLEGILT RLNGVRQFRL DRISGELEVV FDPEVVSSRS LVDGIEEDGF GKFKLRVMSP YERLSSKDTG EASNMFRRFI
0301: SSLVLSIPLF FIQVICPHIA LFDALLVWRC GPFMMGDWLK WALVSVIQFV IGKRFYVAAW RALRNGSTNM DVLVALGTSA SYFYSVGALL YGAVTGFWSP
0401: TYFDASAMLI TFVLLGKYLE SLAKGKTSDA MKKLVQLTPA TAILLTEGKG GKLVGEREID ALLIQPGDTL KVHPGAKIPA DGVVVWGSSY VNESMVTGES
0501: VPVSKEVDSP VIGGTINMHG ALHMKATKVG SDAVLSQIIS LVETAQMSKA PIQKFADYVA SIFVPVVITL ALFTLVGWSI GGAVGAYPDE WLPENGTHFV
0601: FSLMFSISVV VIACPCALGL ATPTAVMVAT GVGATNGVLI KGGDALEKAH KVKYVIFDKT GTLTQGKATV TTTKVFSEMD RGEFLTLVAS AEASSEHPLA
0701: KAIVAYARHF HFFDESTEDG ETNNKDLQNS GWLLDTSDFS ALPGKGIQCL VNEKMILVGN RKLMSENAIN IPDHVEKFVE DLEESGKTGV IVAYNGKLVG
0801: VMGIADPLKR EAALVVEGLL RMGVRPIMVT GDNWRTARAV AKEVGIEDVR AEVMPAGKAD VIRSLQKDGS TVAMVGDGIN DSPALAAADV GMAIGAGTDV
0901: AIEAADYVLM RNNLEDVITA IDLSRKTLTR IRLNYVFAMA YNVVSIPIAA GVFFPVLRVQ LPPWAAGACM ALSSVSVVCS SLLLRRYKKP RLTTVLKITT
1001: E
Arabidopsis Description
RAN1Copper-transporting ATPase RAN1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S7J8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.