CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 2
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, plasma membrane
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
EES17440

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G44790.1	EES17440	AT1G66240.1	17223078

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d011553_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	16.39	90.16
TraesCS7B01G382300.1	Wheat	cytosol	88.88	89.41
TraesCS7A01G480100.1	Wheat	cytosol	88.68	89.21
TraesCS7D01G467100.1	Wheat	cytosol	88.48	89.01
Zm00001d046953_P002	Maize	cytosol, endoplasmic reticulum, plasma membrane	91.36	88.97
Os06t0665800-01	Rice	cytosol	88.18	88.53
Zm00001d027860_P001	Maize	plasma membrane	14.7	88.1
EES06348	Sorghum	cytosol	84.21	85.06
HORVU7Hr1G108890.1	Barley	cytosol, mitochondrion	85.0	83.68
GSMUA_Achr8P06970_001	Banana	cytosol	74.08	79.03
GSMUA_Achr5P26800_001	Banana	cytosol	72.0	77.46
CDY67984	Canola	cytosol, peroxisome, plasma membrane	17.87	73.47
VIT_01s0011g01360.t01	Wine grape	cytosol	69.51	70.0
KRH37212	Soybean	cytosol	68.02	69.47
KRH12191	Soybean	cytosol	67.92	68.67
Solyc02g068490.2.1	Tomato	cytosol	68.12	68.39
PGSC0003DMT400024409	Potato	cytosol	67.92	68.26
AT5G44790.1	Thale cress	cytosol	67.83	68.23
CDY50771	Canola	cytosol	66.93	67.81
KRH58516	Soybean	cytosol	66.83	67.71
CDY39400	Canola	cytosol	66.93	67.47
KRH42397	Soybean	cytosol	66.24	67.1
Bra025102.1-P	Field mustard	cytosol	66.34	67.0
Bra027573.1-P	Field mustard	cytosol	65.14	65.47
CDY26408	Canola	golgi, nucleus, plasma membrane	11.02	64.16
CDY69037	Canola	cytosol	35.45	61.13
CDY67659	Canola	cytosol	35.45	60.0
EES11247	Sorghum	mitochondrion	48.06	48.3
EES04697	Sorghum	cytosol, plastid	44.69	46.2
KXG26864	Sorghum	cytosol, plasma membrane, plastid	46.77	43.53
OQU81022	Sorghum	cytosol	27.11	34.69
KXG40056	Sorghum	plastid	26.22	29.33
EER96099	Sorghum	cytosol	21.65	24.36
EER96100	Sorghum	cytosol	21.85	23.58
KXG20697	Sorghum	plastid	17.87	21.74
EER90320	Sorghum	plasma membrane	21.35	20.11

Protein Annotations

Gene3D:2.70.150.20	MapMan:24.1.2.1.1	Gene3D:3.30.70.100	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	UniProt:A0A194YKS2
InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005507	GO:GO:0005575	GO:GO:0006810
GO:GO:0006812	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0019829
GO:GO:0030001	GO:GO:0046872	GO:GO:0099132	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:HMA_Cu_ion-bd
InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:Heavy-metal-associated_CS	InterPro:IPR006121	InterPro:IPR023214	InterPro:IPR023299
EnsemblPlants:KXG20553	ProteinID:KXG20553	ProteinID:KXG20553.1	InterPro:P-typ_ATPase_IB	PFAM:PF00122	PFAM:PF00403
PFAM:PF00702	PRINTS:PR00119	PRINTS:PR00120	ScanProsite:PS00154	ScanProsite:PS01047	PFscan:PS50846
PANTHER:PTHR43520	PANTHER:PTHR43520:SF14	InterPro:P_typ_ATPase	EnsemblPlantsGene:SORBI_3010G220600	SUPFAM:SSF55008	SUPFAM:SSF56784
SUPFAM:SSF81653	SUPFAM:SSF81665	TIGRFAMs:TIGR00003	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01525	TMHMM:TMhelix
UniParc:UPI0003C70379	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:56275646..56282221

Molecular Weight (calculated)

106897.0 Da

IEP (calculated)

5.245

GRAVY (calculated)

0.348

Length

1007 amino acids

Sequence
(BLAST)

0001: MAHLQLSAVA GAGARPAAAG GRGDEMEDVA LLDSYDEEMG LPPLGASGAE EGAAAEAHVR VTGMTCSACT SAVEAAVSAR SGVRRVAVSL LQNRAHVVFD
0101: PALSKVEDII EAIEDAGFEA EIIPESAVSQ PKSQKTLSAQ FRIGGMTCAN CVNSVEGILK KLPGVKGAVV ALATSLGEVE YVPSAISKDE IVQAIEDAGF
0201: EAAFLQSSEQ DKVLLGLTGL HTERDVEVLN DILKKLDGLR QFGVNIVLSE VEIVFDPEAV GLRSIVDTIE MASNGRFKAD VQNPYTRGAS NDAQEASKML
0301: NLLRSSLFLS IPVFFIRMVC PSIPFLSTLL SMHCGPFLMG DLLKWILVSI VQFVVGKRFY VAAYRAVRHG STNMDVLVVL GTTASYAYSV CALLYGAFTG
0401: FHPPVYFETS AMIITFVLLG KYLEVLAKGK TSDAIKKLVE LVPSTAILVL KDKEGKHVGE REIDARLVQP GDVLKVLPGS KVPADGVVVW GTSHVNESMI
0501: TGESAPIPKE VSSVVIGGTI NLHGILHIQA TKVGSGTVLS QIISLVETAQ MSKAPIQKFA DYVASIFVPI VITLSIVTFS AWFLCGWLGA YPNSWVAENS
0601: NCFVFSLMFA ISVVVIACPC ALGLATPTAV MVATGIGANH GVLVKGGDAL ERAQNVKYVV FDKTGTLTQG KAVVTAAKVF SGMDLGDFLT LVASAEASSE
0701: HPLAKAVLDY AFHFHFFGKL PSSKDGIEQQ KDKVLSQWLL EAEDFSAVPG KGVQCSINGK HVLVGNRSLM TENGVTIPPE AETFLIDLES NAKTGILVAY
0801: DGDFVGLMGI TDPLKREAAV VVEGLKKLGV HPVMLTGDNW RTAQAVAKEV GIEDVRAEVM PAGKADVVRA LQKDGSTVAM VGDGINDSPA LAAADVGMAI
0901: GGGTDIAIEA ADYVLVRNNL EDVITAIDLS RKTFSRIRWN YFFAMAYNVV AIPIAAGALF PFTGLQMPPW LAGACMAFSS VSVVCSSLLL RRYRKPRLTT
1001: VLQITVE

Best Arabidopsis Sequence Match ( AT5G44790.1 )
(BLAST)

0001: MAPSRRDLQL TPVTGGSSSQ ISDMEEVGLL DSYHNEANAD DILTKIEEGR DVSGLRKIQV GVTGMTCAAC SNSVEAALMN VNGVFKASVA LLQNRADVVF
0101: DPNLVKEEDI KEAIEDAGFE AEILAEEQTQ ATLVGQFTIG GMTCAACVNS VEGILRDLPG VKRAVVALST SLGEVEYDPN VINKDDIVNA IEDAGFEGSL
0201: VQSNQQDKLV LRVDGILNEL DAQVLEGILT RLNGVRQFRL DRISGELEVV FDPEVVSSRS LVDGIEEDGF GKFKLRVMSP YERLSSKDTG EASNMFRRFI
0301: SSLVLSIPLF FIQVICPHIA LFDALLVWRC GPFMMGDWLK WALVSVIQFV IGKRFYVAAW RALRNGSTNM DVLVALGTSA SYFYSVGALL YGAVTGFWSP
0401: TYFDASAMLI TFVLLGKYLE SLAKGKTSDA MKKLVQLTPA TAILLTEGKG GKLVGEREID ALLIQPGDTL KVHPGAKIPA DGVVVWGSSY VNESMVTGES
0501: VPVSKEVDSP VIGGTINMHG ALHMKATKVG SDAVLSQIIS LVETAQMSKA PIQKFADYVA SIFVPVVITL ALFTLVGWSI GGAVGAYPDE WLPENGTHFV
0601: FSLMFSISVV VIACPCALGL ATPTAVMVAT GVGATNGVLI KGGDALEKAH KVKYVIFDKT GTLTQGKATV TTTKVFSEMD RGEFLTLVAS AEASSEHPLA
0701: KAIVAYARHF HFFDESTEDG ETNNKDLQNS GWLLDTSDFS ALPGKGIQCL VNEKMILVGN RKLMSENAIN IPDHVEKFVE DLEESGKTGV IVAYNGKLVG
0801: VMGIADPLKR EAALVVEGLL RMGVRPIMVT GDNWRTARAV AKEVGIEDVR AEVMPAGKAD VIRSLQKDGS TVAMVGDGIN DSPALAAADV GMAIGAGTDV
0901: AIEAADYVLM RNNLEDVITA IDLSRKTLTR IRLNYVFAMA YNVVSIPIAA GVFFPVLRVQ LPPWAAGACM ALSSVSVVCS SLLLRRYKKP RLTTVLKITT
1001: E

Arabidopsis Description

RAN1Copper-transporting ATPase RAN1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S7J8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.