CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
plasma membrane 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d005190_P001	Maize	plastid	81.56	81.29
TraesCS5A01G383400.1	Wheat	plasma membrane	64.8	71.08
HORVU5Hr1G094430.8	Barley	endoplasmic reticulum, plasma membrane	60.22	70.46
TraesCS5B01G388000.1	Wheat	plasma membrane	64.92	70.08
TraesCS5D01G392700.1	Wheat	plasma membrane	65.81	69.05
EER96100	Sorghum	cytosol	64.13	61.52
Os07t0232900-01	Rice	cytosol, nucleus, plasma membrane	67.93	60.56
VIT_11s0103g00370.t01	Wine grape	plasma membrane	42.91	53.48
GSMUA_Achr5P22660_001	Banana	plasma membrane	48.38	53.0
CDY51647	Canola	golgi, plasma membrane, vacuole	20.45	52.89
AT4G30120.1	Thale cress	cytosol	31.17	51.48
Bra024103.1-P	Field mustard	peroxisome, plasma membrane, vacuole	41.79	48.95
CDY28160	Canola	cytosol	41.45	48.94
CDX68627	Canola	cytosol, plasma membrane, vacuole	41.34	48.81
Bra011165.1-P	Field mustard	cytosol	41.34	48.81
KRH02816	Soybean	plasma membrane	39.78	47.59
GSMUA_Achr5P21940_001	Banana	extracellular, plasma membrane	49.27	47.17
GSMUA_Achr8P24660_001	Banana	cytosol	49.5	47.08
CDY69827	Canola	plasma membrane	33.07	46.98
CDY72630	Canola	golgi, plasma membrane, vacuole	18.1	46.55
EER90320	Sorghum	plasma membrane	53.85	45.09
CDY69511	Canola	plasma membrane	35.87	44.83
CDY51646	Canola	cytosol, plasma membrane, vacuole	9.72	44.62
Bra011164.1-P	Field mustard	cytosol, plasma membrane	43.46	44.61
CDY51690	Canola	cytosol, plasma membrane, vacuole	8.49	44.44
CDY62400	Canola	plasma membrane	42.91	44.04
CDY30170	Canola	cytosol, peroxisome, plasma membrane	43.02	44.0
CDX68625	Canola	plasma membrane	35.08	43.01
KRH37273	Soybean	cytosol, plasma membrane, vacuole	42.12	42.6
Bra024107.1-P	Field mustard	plasma membrane	40.45	41.0
AT4G30110.1	Thale cress	plasma membrane	43.46	40.9
CDY28206	Canola	plasma membrane	31.84	39.53
CDX68623	Canola	cytosol, endoplasmic reticulum, plasma membrane	23.24	38.1
KRH19069	Soybean	plasma membrane	45.59	37.23
CDY51090	Canola	cytosol	42.35	34.83
AT2G19110.2	Thale cress	cytosol	43.46	33.19
CDY36489	Canola	cytosol	42.57	33.16
Bra024449.1-P	Field mustard	cytosol	41.56	31.26
Solyc07g009130.2.1	Tomato	plastid	44.13	30.34
Bra038842.1-P	Field mustard	cytosol	42.57	29.98
OQU81022	Sorghum	cytosol	21.79	24.78
CDY08717	Canola	cytosol, nucleus, plasma membrane	43.13	24.76
KXG20697	Sorghum	plastid	22.12	23.91
EES04697	Sorghum	cytosol, plastid	24.36	22.38
KXG40056	Sorghum	plastid	22.01	21.89
KXG20553	Sorghum	plasma membrane	24.36	21.65
EES06348	Sorghum	cytosol	23.69	21.26
EES11247	Sorghum	mitochondrion	23.35	20.86
KXG26864	Sorghum	cytosol, plasma membrane, plastid	23.02	19.04
CDY51648	Canola	cytosol	1.01	13.24

Protein Annotations

Gene3D:2.70.150.20	MapMan:24.1.2.1.1	Gene3D:3.30.70.100	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	InterPro:ATPase_P-typ_P_site
InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	UniProt:C5XDI2	EnsemblPlants:EER96099	ProteinID:EER96099
ProteinID:EER96099.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488
GO:GO:0005575	GO:GO:0006810	GO:GO:0006812	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0019829	GO:GO:0030001	GO:GO:0046872	GO:GO:0099132	InterPro:HAD-like_sf
InterPro:HAD_sf	InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:IPR006121	InterPro:IPR023214	InterPro:IPR023299
InterPro:P-typ_ATPase_IB	PFAM:PF00122	PFAM:PF00403	PFAM:PF00702	PRINTS:PR00119	ScanProsite:PS00154
PFscan:PS50846	PANTHER:PTHR43338	PANTHER:PTHR43338:SF2	InterPro:P_typ_ATPase	EnsemblPlantsGene:SORBI_3002G083000	SUPFAM:SSF55008
SUPFAM:SSF56784	SUPFAM:SSF81653	SUPFAM:SSF81665	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01512	TIGRFAMs:TIGR01525
TMHMM:TMhelix	UniParc:UPI0001A839CC	RefSeq:XP_002459578.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr2:+:8878263..8881628

Molecular Weight (calculated)

91799.2 Da

IEP (calculated)

7.959

GRAVY (calculated)

0.240

Length

895 amino acids

Sequence
(BLAST)

001: MRGGDSPAKA PAEAAALEER LLPPPVTRSG DAGAGGGKRG GSKWEKTYLD VLGVCCSAEV ALVERLLKPI DGVRSVTVVV PSRTVVVEHD PAAVSQSHIG
101: AQQGGLEASV RAYGSTSGGV GVVARWPSPY VVASGGLLLA SLLAPLLPPL RWLALAAACA GAPPMLLRAL ASGLALALDI NALMLVAVAG AAALGDYAEA
201: GAIVFLFTAA EWLETLACTK ASAGMSTLLT MVPPRVVLAG TGEVVSVRDV EVGTVVAVRA GEVVPVDGVV VDGQSEVDES SLTGESFPVP KLPPSEVWAG
301: TMNMDGYIAV RTTALADDST VARMQRLVEA AQNSRSKTQR LVDSCAKYYT PGVVVLAASV ALVPLLLGAK DLKRWCQLAL VLLVSACPCA LVLSTPVATF
401: CALLRAARMG VLIKGGDVLE SLGEIRVAAF DKTGTITKGQ FSIDGFHVVG DKVEMSQLLY WVSSIESKSS HPMAAALVEY SQSKSIQPKP ENVTEFRIFP
501: GEGISGVING RQIFIGNRRI MARSSCYTAP EMDDHRGASI GYVIVDGDLV GAFSLSDDCR TGAAEAIMEL RSMGIKSVML TGDSRAAATR AQQQLGGVLE
601: ELHWELLPAD KVSLVGDLKA RAGATLMVGD GMNDAPALAA SDVGVSMGLS GSAAAMETSH ATLMSSDILR VPAAVALGRC TRATIAANVV VSVGAKAAVL
701: ALAVAWRPLL WAAVLADVGT CLLVVLHSML LLREPAGTGS WRRRGGPPEA CRATARSLAM RSQLDGASNG GAAGGSVRRE PGCRCCQKPR KPFEQEHAAV
801: VIDIPAPSAD AEHPRATAKG DATGCCGGAR VACAAPTTVT SVNCAPRGCC GGKGKGDSRV SARTSCSSNG GGGAARDPPK KAGNGCNARC CSSGK

Best Arabidopsis Sequence Match ( AT4G30110.2 )
(BLAST)

001: MASKKMTKSY FDVLGICCTS EVPLIENILN SMDGVKEFSV IVPSRTVIVV HDTLILSQFQ IVKALNQAQL EANVRVTGET NFKNKWPSPF AVVSGILLLL
101: SFFKYLYSPF RWLAVAAVVA GIYPILAKAV ASLARFRIDI NILVVVTVGA TIGMQDYTEA AVVVFLFTIA EWLQSRASYK ASAVMQSLMS LAPQKAVIAE
201: TGEEVEVDEL KTNTVIAVKA GETIPIDGVV VDGNCEVDEK TLTGEAFPVP KLKDSTVWAG TINLNGYITV NTTALAEDCV VAKMAKLVEE AQNSKTETQR
301: FIDKCSKYYT PAIILISICF VAIPFALKVH NLKHWVHLAL VVLVSACPCG LILSTPVATF CALTKAATSG LLIKGADYLE TLAKIKIVAF DKTGTITRGE
401: FIVMDFQSLS EDISLQSLLY WVSSTESKSS HPMAAAVVDY ARSVSVEPKP EAVEDYQNFP GEGIYGKIDG KEVYIGNKRI ASRAGCLSVP DIDVDTKGGK
501: TIGYVYVGET LAGVFNLSDA CRSGVAQAMK ELKSLGIKIA MLTGDNHAAA MHAQEQLGNA MDIVRAELLP EDKSEIIKQL KREEGPTAMV GDGLNDAPAL
601: ATADIGISMG VSGSALATET GNIILMSNDI RRIPQAIKLA KRAKRKVVEN VVISITMKGA ILALAFAGHP LIWAAVLADV GTCLLVILNS MLLLSDKHKT
701: GNKCYRESSS SSVLIAEKLE GDAAGDMEAG LLPKISDKHC KPGCCGTKTQ EKAMKPAKAS SDHSHSGCCE TKQKDNVTVV KKSCCAEPVD LGHGHDSGCC
801: GDKSQQPHQH EVQVQQSCHN KPSGLDSGCC GGKSQQPHQH ELQQSCHDKP SGLDIGTGPK HEGSSTLVNL EGDAKEELKV LVNGFCSSPA DLAITSLKVK
901: SDSHCKSNCS SRERCHHGSN CCRSYAKESC SHDHHHTRAH GVGTLKEIVI E

Arabidopsis Description

HMA2Cadmium/zinc-transporting ATPase HMA2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZW4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.