Factsheet for Bra024103.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, vacuole, plasma membrane

Predictor Summary:

cytosol 2
peroxisome 1
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome, plasma membrane, vacuole
Any Predictor:	cytosol, peroxisome, secretory
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	peroxisome
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY51648	Canola	cytosol	8.64	97.06
CDY51647	Canola	golgi, plasma membrane, vacuole	42.67	94.22
CDY51646	Canola	cytosol, plasma membrane, vacuole	23.43	91.79
AT4G30120.1	Thale cress	cytosol	64.01	90.22
Bra011165.1-P	Field mustard	cytosol	89.14	89.84
CDY72630	Canola	golgi, plasma membrane, vacuole	40.71	89.37
CDY51690	Canola	cytosol, plasma membrane, vacuole	19.9	88.89
VIT_11s0103g00370.t01	Wine grape	plasma membrane	60.21	64.07
Bra011164.1-P	Field mustard	cytosol, plasma membrane	68.32	59.86
KRH02816	Soybean	plasma membrane	55.37	56.55
Bra024107.1-P	Field mustard	plasma membrane	64.66	55.95
TraesCS7B01G320900.1	Wheat	plasma membrane	54.58	54.44
GSMUA_Achr5P22660_001	Banana	plasma membrane	55.37	51.77
HORVU5Hr1G094430.8	Barley	endoplasmic reticulum, plasma membrane	49.74	49.67
TraesCS5A01G383400.1	Wheat	plasma membrane	50.13	46.94
TraesCS5B01G388000.1	Wheat	plasma membrane	50.39	46.44
TraesCS5D01G392700.1	Wheat	plasma membrane	50.26	45.02
TraesCS7A01G420000.1	Wheat	plasma membrane	54.58	44.41
GSMUA_Achr8P24660_001	Banana	cytosol	54.32	44.1
GSMUA_Achr5P21940_001	Banana	extracellular, plasma membrane	53.93	44.06
TraesCS7D01G412800.1	Wheat	plasma membrane	54.45	44.02
HORVU7Hr1G097210.4	Barley	plasma membrane	53.93	43.55
KRH19069	Soybean	plasma membrane	61.91	43.16
TraesCS7A01G419500.1	Wheat	plasma membrane	54.84	42.54
TraesCS7D01G412400.1	Wheat	plasma membrane	55.37	42.17
HORVU7Hr1G097240.1	Barley	plasma membrane	55.5	42.02
Bra024449.1-P	Field mustard	cytosol	65.44	42.02
Zm00001d005190_P001	Maize	plastid	49.35	41.98
EER96099	Sorghum	cytosol	48.95	41.79
TraesCS7B01G320100.2	Wheat	plasma membrane	55.37	41.35
EER96100	Sorghum	cytosol	50.26	41.16
Bra038842.1-P	Field mustard	cytosol	67.15	40.36
EER90320	Sorghum	plasma membrane	56.15	40.13
Os06t0700700-02	Rice	plasma membrane	55.76	39.92
Os07t0232900-01	Rice	cytosol, nucleus, plasma membrane	51.7	39.34
Zm00001d005189_P001	Maize	plasma membrane	49.48	39.21
Zm00001d014669_P007	Maize	plasma membrane	54.84	38.13
Solyc07g009130.2.1	Tomato	plastid	59.69	35.02
Zm00001d019226_P003	Maize	cytosol	36.13	30.91
Bra025102.1-P	Field mustard	cytosol	27.62	21.16
Bra011750.1-P	Field mustard	plastid	22.25	20.78
Bra002374.1-P	Field mustard	plastid	23.95	20.68
Bra027573.1-P	Field mustard	cytosol	27.09	20.66
Bra039194.1-P	Field mustard	plastid	20.81	20.54
Bra003110.1-P	Field mustard	cytosol	24.74	19.34
Bra011450.1-P	Field mustard	plastid	23.04	18.72
Bra027641.1-P	Field mustard	mitochondrion	25.92	16.61

Protein Annotations

Gene3D:2.70.150.20	MapMan:24.1.2.1.1	Gene3D:3.30.70.100	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	InterPro:ATPase_P-typ_P_site
InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	EnsemblPlantsGene:Bra024103	EnsemblPlants:Bra024103.1	EnsemblPlants:Bra024103.1-P
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005575
GO:GO:0006810	GO:GO:0006812	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0019829	GO:GO:0030001	GO:GO:0046872	GO:GO:0099132	InterPro:HAD-like_sf	InterPro:HAD_sf
InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:IPR006121	InterPro:IPR023214	InterPro:IPR023299	UniProt:M4E5P9
InterPro:P-typ_ATPase_IB	PFAM:PF00122	PFAM:PF00702	PRINTS:PR00119	PRINTS:PR00120	ScanProsite:PS00154
ScanProsite:PS01229	PFscan:PS50846	PANTHER:PTHR43338	InterPro:P_typ_ATPase	SUPFAM:SSF55008	SUPFAM:SSF56784
SUPFAM:SSF81653	SUPFAM:SSF81665	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01512	TIGRFAMs:TIGR01525	TMHMM:TMhelix
UniParc:UPI0002540DAF	SEG:seg	:	:	:	:

Description

AT2G19110 (E=6e-284) HMA4 | HMA4; cadmium ion transmembrane transporter/ cadmium-transporting ATPase/ zinc ion transmembrane transporter

Coordinates

chrA03:+:27608642..27611778

Molecular Weight (calculated)

81987.8 Da

IEP (calculated)

5.973

GRAVY (calculated)

0.252

Length

764 amino acids

Sequence
(BLAST)

001: MANVEETTKK KLQTSYFDVV GICCSSEVSL VGEILRPLDG VKEFSVIVPS RTVIVVHDIL LISPLQIVKA LNKARLEASV RPYGETSLTS QWPSPFAVVS
101: GVLLALSFLK YFYSPLEWFA VVAVVAGVFP ILAKAVASVT RFRVDINALT LIAVIATVCM EDYTEAATIV FLFSVADWLE SSAAHKASTV MSSLMSLAPR
201: KAVIAETGQE VDVDDVGINT VVSVKAGESI PIDGVVVDGS CDVDEKTLTG ESFPVSKQRD STVLAATINL NGYIKVKTTA LARDCVVAKM TKLVEEAQKS
301: QTKTQRFIDK CSRYYTPAVV VVAACFAVIP VLLKVQNLSH WFHLALVVLV SGCPCGLILS TPVATFCALT KAATSGFLIK TGDCLETLAK IRISAFDKTG
401: TITKAEFTVS DFKSLSPNIN LKTLLYWVSS IESKSSHPMA AALIDYARSV SVEPTPDRVE NFQNFPGEGV YGRIDGQDIY IGNKRIAQRA GCLSTVPGIE
501: ANMKRGKTIG YIYIGEELTG SFNLLDGCRH GAAQALQELK SLNIKTAMLT GDNRDAAMSI QEQLGDALDI VHAELLPQDK ARIIDEFKSQ GPTMMVGDGL
601: NDAPALAKAD IGISMGISGS ALATETGDII LMSNDINKIP KGMRLARRSH RKVIENVVLS VGIKGAIMVL GLVGYPLIWA AVLADAGTCL LVILNSMMLL
701: RDEREAAPVC YRASPLSPVK LEEPEVEDLE VGLLQKSGET SKKSCCSGCC SGPKDKQTGD LESF

Best Arabidopsis Sequence Match ( AT2G19110.2 )
(BLAST)

0001: MALQNKEEEK KKVKKLQKSY FDVLGICCTS EVPIIENILK SLDGVKEYSV IVPSRTVIVV HDSLLISPFQ IAKALNEARL EANVRVNGET SFKNKWPSPF
0101: AVVSGLLLLL SFLKFVYSPL RWLAVAAVAA GIYPILAKAF ASIKRPRIDI NILVIITVIA TLAMQDFMEA AAVVFLFTIS DWLETRASYK ATSVMQSLMS
0201: LAPQKAIIAE TGEEVEVDEV KVDTVVAVKA GETIPIDGIV VDGNCEVDEK TLTGEAFPVP KQRDSTVWAG TINLNGYICV KTTSLAGDCV VAKMAKLVEE
0301: AQSSKTKSQR LIDKCSQYYT PAIILVSACV AIVPVIMKVH NLKHWFHLAL VVLVSGCPCG LILSTPVATF CALTKAATSG LLIKSADYLD TLSKIKIVAF
0401: DKTGTITRGE FIVIDFKSLS RDINLRSLLY WVSSVESKSS HPMAATIVDY AKSVSVEPRP EEVEDYQNFP GEGIYGKIDG NDIFIGNKKI ASRAGCSTVP
0501: EIEVDTKGGK TVGYVYVGER LAGFFNLSDA CRSGVSQAMA ELKSLGIKTA MLTGDNQAAA MHAQEQLGNV LDVVHGDLLP EDKSRIIQEF KKEGPTAMVG
0601: DGVNDAPALA TADIGISMGI SGSALATQTG NIILMSNDIR RIPQAVKLAR RARRKVVENV CLSIILKAGI LALAFAGHPL IWAAVLVDVG TCLLVIFNSM
0701: LLLREKKKIG NKKCYRASTS KLNGRKLEGD DDYVVDLEAG LLTKSGNGQC KSSCCGDKKN QENVVMMKPS SKTSSDHSHP GCCGDKKEEK VKPLVKDGCC
0801: SEKTRKSEGD MVSLSSCKKS SHVKHDLKMK GGSGCCASKN EKGKEVVAKS CCEKPKQQVE SVGDCKSGHC EKKKQAEDIV VPVQIIGHAL THVEIELQTK
0901: ETCKTSCCDS KEKVKETGLL LSSENTPYLE KGVLIKDEGN CKSGSENMGT VKQSCHEKGC SDEKQTGEIT LASEEETDDQ DCSSGCCVNE GTVKQSFDEK
1001: KHSVLVEKEG LDMETGFCCD AKLVCCGNTE GEVKEQCRLE IKKEEHCKSG CCGEEIQTGE ITLVSEEETE STNCSTGCCV DKEEVTQTCH EKPASLVVSG
1101: LEVKKDEHCE SSHRAVKVET CCKVKIPEAC ASKCRDRAKR HSGKSCCRSY AKELCSHRHH HHHHHHHHHV SA

Arabidopsis Description

HMA4Putative cadmium/zinc-transporting ATPase HMA4 [Source:UniProtKB/Swiss-Prot;Acc:O64474]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.