Factsheet for Bra011164.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, cytosol

Predictor Summary:

cytosol 3
plasma membrane 4
extracellular 2
endoplasmic reticulum 2
vacuole 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane
Any Predictor:	cytosol, secretory
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY69511	Canola	plasma membrane	82.0	99.86
Bra024107.1-P	Field mustard	plasma membrane	82.22	81.2
AT4G30110.1	Thale cress	plasma membrane	83.37	76.45
VIT_11s0103g00370.t01	Wine grape	plasma membrane	56.88	69.08
Bra024103.1-P	Field mustard	peroxisome, plasma membrane, vacuole	59.86	68.32
Bra011165.1-P	Field mustard	cytosol	58.49	67.28
KRH02816	Soybean	plasma membrane	51.95	60.56
TraesCS7B01G320900.1	Wheat	plasma membrane	50.46	57.44
GSMUA_Achr5P22660_001	Banana	plasma membrane	51.15	54.59
Bra024449.1-P	Field mustard	cytosol	71.56	52.44
HORVU5Hr1G094430.8	Barley	endoplasmic reticulum, plasma membrane	44.61	50.85
Bra038842.1-P	Field mustard	cytosol	72.02	49.41
TraesCS7A01G420000.1	Wheat	plasma membrane	52.52	48.78
KRH19069	Soybean	plasma membrane	61.12	48.63
TraesCS7D01G412800.1	Wheat	plasma membrane	52.29	48.25
GSMUA_Achr8P24660_001	Banana	cytosol	51.83	48.03
TraesCS5B01G388000.1	Wheat	plasma membrane	45.64	48.01
TraesCS5A01G383400.1	Wheat	plasma membrane	44.72	47.79
HORVU7Hr1G097210.4	Barley	plasma membrane	51.49	47.46
GSMUA_Achr5P21940_001	Banana	extracellular, plasma membrane	50.46	47.06
TraesCS7D01G412400.1	Wheat	plasma membrane	53.33	46.36
TraesCS7A01G419500.1	Wheat	plasma membrane	52.18	46.19
TraesCS5D01G392700.1	Wheat	plasma membrane	45.18	46.19
HORVU7Hr1G097240.1	Barley	plasma membrane	53.44	46.18
TraesCS7B01G320100.2	Wheat	plasma membrane	53.1	45.26
Os06t0700700-02	Rice	plasma membrane	53.21	43.49
EER96099	Sorghum	cytosol	44.61	43.46
Zm00001d005190_P001	Maize	plastid	44.27	42.98
EER90320	Sorghum	plasma membrane	52.52	42.84
EER96100	Sorghum	cytosol	45.53	42.55
Zm00001d005189_P001	Maize	plasma membrane	45.87	41.49
Zm00001d014669_P007	Maize	plasma membrane	51.95	41.22
Os07t0232900-01	Rice	cytosol, nucleus, plasma membrane	47.02	40.84
Solyc07g009130.2.1	Tomato	plastid	57.45	38.48
Zm00001d019226_P003	Maize	cytosol	34.17	33.37
Bra002374.1-P	Field mustard	plastid	22.36	22.03
Bra011750.1-P	Field mustard	plastid	20.07	21.39
Bra025102.1-P	Field mustard	cytosol	24.31	21.26
Bra027573.1-P	Field mustard	cytosol	23.85	20.76
Bra039194.1-P	Field mustard	plastid	18.23	20.54
Bra003110.1-P	Field mustard	cytosol	22.59	20.16
Bra011450.1-P	Field mustard	plastid	21.45	19.89
Bra027641.1-P	Field mustard	mitochondrion	24.08	17.62

Protein Annotations

Gene3D:2.70.150.20	MapMan:24.1.2.1.1	Gene3D:3.30.70.100	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	InterPro:ATPase_P-typ_P_site
InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	EnsemblPlantsGene:Bra011164	EnsemblPlants:Bra011164.1	EnsemblPlants:Bra011164.1-P
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005575
GO:GO:0006810	GO:GO:0006812	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0019829	GO:GO:0030001	GO:GO:0046872	GO:GO:0099132	InterPro:HAD-like_sf	InterPro:HAD_sf
InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:IPR006121	InterPro:IPR023214	InterPro:IPR023299	UniProt:M4D3W0
InterPro:P-typ_ATPase_IB	PFAM:PF00122	PFAM:PF00702	PRINTS:PR00119	ScanProsite:PS00154	PFscan:PS50846
PANTHER:PTHR43338	InterPro:P_typ_ATPase	SUPFAM:SSF55008	SUPFAM:SSF56784	SUPFAM:SSF81653	SUPFAM:SSF81665
TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01512	TIGRFAMs:TIGR01525	TMHMM:TMhelix	UniParc:UPI0002546F8D	SEG:seg

Description

AT4G30110 (E=0.0) HMA2 | HMA2; cadmium-transporting ATPase

Coordinates

chrA01:+:3577237..3581366

Molecular Weight (calculated)

94263.3 Da

IEP (calculated)

7.349

GRAVY (calculated)

0.042

Length

872 amino acids

Sequence
(BLAST)

001: MATKNEKKMT KSYFDVLGIC CTSEVPLIEN ILNSLDGVKE YSVIVPSRTV IVVHDSLIIS QFNIVKALNQ ARLEANVRVT GETNFKNKWP SPFAVVSGVL
101: LLLSFFKYVY SPFRWLAVAA VVAGIYPILA KSVASIARAR IDINILVVIT VGATLGMRDY TEAAAVVFLF TIAEWLQSRA SYKASAVMQS LMSLAPQKAV
201: IAETGEEVEV DELKINTVIA VKAGETISID GVVVDGNCEV DEKTLTGEAF PVPKLRDSTV WAGTINLNGY ITVKTTALAE DCVVAKMAKL VEEAQNSKTE
301: TQRFIDECSK YYTPAIILIS LCFVVIPFAL KVHNMKHWLH LALVVLVSAC PCGLILSTPV ATFCALTKAA TSGLLIKGAD YLETLAKIKT VAFDKTGTIT
401: RGEFIVMDFK SLSRDISLHS LLYWVSSVES KSSHPMAAAL VDYAKSISVE PKPEAVEDYQ NFPGEGIHGK IGGKEVYIGN KRIASRAGCS SVPDIDVDTK
501: GGKTVGYVYL GETLAGVFNL SDACRSGVAQ AMKELKSMGI KTAMLTGDNQ ASAMHAQEQL GNVMDVVHAE LLPEGKSQII KEFKREGPTA MVGDGLNDAP
601: ALATADIGIS MGVSGSALAT ETGHIILMSN DIRRIPQAIR LARRGKRKVV ENVVLSITMK GAILALAFAG HPLIWAAVLA DVGTCLLVIL NSMLLLRDVH
701: VPGGKCHRAE KGACDVVGDM EAGLLPKHCK SGCCGKKNQQ EVMKLDKTSE GHGHSGCCDK KREDKVMIVR KRCESRCCGD KIQQRDQDEV KQSCHNKAGD
801: TEEIRLDISV KGCCSRPVAD PVVASDGHRE SSCCESSRKG NNEEACCEVE TNESNCSSRE KHHSHCHSHH HE

Best Arabidopsis Sequence Match ( AT4G30110.2 )
(BLAST)

001: MASKKMTKSY FDVLGICCTS EVPLIENILN SMDGVKEFSV IVPSRTVIVV HDTLILSQFQ IVKALNQAQL EANVRVTGET NFKNKWPSPF AVVSGILLLL
101: SFFKYLYSPF RWLAVAAVVA GIYPILAKAV ASLARFRIDI NILVVVTVGA TIGMQDYTEA AVVVFLFTIA EWLQSRASYK ASAVMQSLMS LAPQKAVIAE
201: TGEEVEVDEL KTNTVIAVKA GETIPIDGVV VDGNCEVDEK TLTGEAFPVP KLKDSTVWAG TINLNGYITV NTTALAEDCV VAKMAKLVEE AQNSKTETQR
301: FIDKCSKYYT PAIILISICF VAIPFALKVH NLKHWVHLAL VVLVSACPCG LILSTPVATF CALTKAATSG LLIKGADYLE TLAKIKIVAF DKTGTITRGE
401: FIVMDFQSLS EDISLQSLLY WVSSTESKSS HPMAAAVVDY ARSVSVEPKP EAVEDYQNFP GEGIYGKIDG KEVYIGNKRI ASRAGCLSVP DIDVDTKGGK
501: TIGYVYVGET LAGVFNLSDA CRSGVAQAMK ELKSLGIKIA MLTGDNHAAA MHAQEQLGNA MDIVRAELLP EDKSEIIKQL KREEGPTAMV GDGLNDAPAL
601: ATADIGISMG VSGSALATET GNIILMSNDI RRIPQAIKLA KRAKRKVVEN VVISITMKGA ILALAFAGHP LIWAAVLADV GTCLLVILNS MLLLSDKHKT
701: GNKCYRESSS SSVLIAEKLE GDAAGDMEAG LLPKISDKHC KPGCCGTKTQ EKAMKPAKAS SDHSHSGCCE TKQKDNVTVV KKSCCAEPVD LGHGHDSGCC
801: GDKSQQPHQH EVQVQQSCHN KPSGLDSGCC GGKSQQPHQH ELQQSCHDKP SGLDIGTGPK HEGSSTLVNL EGDAKEELKV LVNGFCSSPA DLAITSLKVK
901: SDSHCKSNCS SRERCHHGSN CCRSYAKESC SHDHHHTRAH GVGTLKEIVI E

Arabidopsis Description

HMA2Cadmium/zinc-transporting ATPase HMA2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZW4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.