Factsheet for Zm00001d005190_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 1
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

plastid: 22065420

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER96099	Sorghum	cytosol	81.29	81.56
TraesCS5A01G383400.1	Wheat	plasma membrane	65.59	72.18
HORVU5Hr1G094430.8	Barley	endoplasmic reticulum, plasma membrane	61.36	72.03
TraesCS5B01G388000.1	Wheat	plasma membrane	65.48	70.93
TraesCS5D01G392700.1	Wheat	plasma membrane	66.26	69.75
Zm00001d005189_P001	Maize	plasma membrane	67.93	63.28
Os07t0232900-01	Rice	cytosol, nucleus, plasma membrane	67.48	60.36
GSMUA_Achr5P22660_001	Banana	plasma membrane	49.11	53.98
VIT_11s0103g00370.t01	Wine grape	plasma membrane	42.76	53.48
CDY51647	Canola	golgi, plasma membrane, vacuole	20.27	52.6
AT4G30120.1	Thale cress	cytosol	31.07	51.48
Bra024103.1-P	Field mustard	peroxisome, plasma membrane, vacuole	41.98	49.35
CDY28160	Canola	cytosol	41.54	49.21
Bra011165.1-P	Field mustard	cytosol	41.31	48.94
CDX68627	Canola	cytosol, plasma membrane, vacuole	41.2	48.81
Zm00001d019226_P003	Maize	cytosol	47.44	47.7
GSMUA_Achr5P21940_001	Banana	extracellular, plasma membrane	49.44	47.49
CDY72630	Canola	golgi, plasma membrane, vacuole	18.37	47.41
KRH02816	Soybean	plasma membrane	39.31	47.19
CDY69827	Canola	plasma membrane	32.85	46.83
GSMUA_Achr8P24660_001	Banana	cytosol	49.0	46.76
CDY51646	Canola	cytosol, plasma membrane, vacuole	9.69	44.62
CDY51690	Canola	cytosol, plasma membrane, vacuole	8.46	44.44
Zm00001d014669_P007	Maize	plasma membrane	54.34	44.4
Bra011164.1-P	Field mustard	cytosol, plasma membrane	42.98	44.27
CDY62400	Canola	plasma membrane	42.87	44.15
CDY69511	Canola	plasma membrane	35.19	44.13
CDY30170	Canola	cytosol, peroxisome, plasma membrane	42.87	44.0
CDX68625	Canola	plasma membrane	34.74	42.74
KRH37273	Soybean	cytosol, plasma membrane, vacuole	41.65	42.26
Bra024107.1-P	Field mustard	plasma membrane	40.65	41.34
AT4G30110.1	Thale cress	plasma membrane	43.54	41.11
CDY28206	Canola	plasma membrane	31.74	39.53
CDX68623	Canola	cytosol, endoplasmic reticulum, plasma membrane	22.61	37.18
KRH19069	Soybean	plasma membrane	45.1	36.95
CDY51090	Canola	cytosol	41.98	34.65
AT2G19110.2	Thale cress	cytosol	43.32	33.19
CDY36489	Canola	cytosol	42.43	33.16
Bra024449.1-P	Field mustard	cytosol	41.43	31.26
Solyc07g009130.2.1	Tomato	plastid	44.21	30.49
Bra038842.1-P	Field mustard	cytosol	42.2	29.82
Zm00001d027860_P001	Maize	plasma membrane	5.01	26.79
Zm00001d011553_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	5.35	26.23
CDY08717	Canola	cytosol, nucleus, plasma membrane	42.87	24.7
Zm00001d014569_P002	Maize	plastid	21.83	23.82
Zm00001d015829_P003	Maize	plasma membrane	24.94	22.86
Zm00001d027884_P003	Maize	plastid	22.38	22.28
Zm00001d053783_P001	Maize	plasma membrane	24.16	21.74
Zm00001d002708_P001	Maize	mitochondrion	23.94	21.52
Zm00001d052801_P004	Maize	plastid	22.61	20.97
Zm00001d002705_P002	Maize	cytosol, plastid	23.72	20.56
Zm00001d046953_P002	Maize	cytosol, endoplasmic reticulum, plasma membrane	23.39	20.31
CDY51648	Canola	cytosol	1.0	13.24

Protein Annotations

Gene3D:2.70.150.20	MapMan:24.1.2.1.1	Gene3D:3.30.70.100	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	UniProt:A0A1D6EL09
InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005575	GO:GO:0006810	GO:GO:0006812
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0019829	GO:GO:0030001
GO:GO:0046872	GO:GO:0099132	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:HMA_dom	InterPro:HMA_dom_sf
InterPro:IPR006121	InterPro:IPR023214	InterPro:IPR023299	ProteinID:ONM20586.1	InterPro:P-typ_ATPase_IB	PFAM:PF00122
PFAM:PF00702	PRINTS:PR00119	ScanProsite:PS00154	PFscan:PS50846	PANTHER:PTHR43338	PANTHER:PTHR43338:SF2
InterPro:P_typ_ATPase	SUPFAM:SSF55008	SUPFAM:SSF56784	SUPFAM:SSF81653	SUPFAM:SSF81665	TIGRFAMs:TIGR01494
TIGRFAMs:TIGR01525	TMHMM:TMhelix	UniParc:UPI000221F200	EnsemblPlantsGene:Zm00001d005190	EnsemblPlants:Zm00001d005190_P001	EnsemblPlants:Zm00001d005190_T001
SEG:seg	:	:	:	:	:

Description

Cadmium/zinc-transporting ATPase HMA2

Coordinates

chr2:-:163038225..163041426

Molecular Weight (calculated)

92241.2 Da

IEP (calculated)

7.582

GRAVY (calculated)

0.216

Length

898 amino acids

Sequence
(BLAST)

001: MGSVEERLLP PPPARSADAG AGGAKSGKWE KTYLDVLGVC CSAEVALVER LLKPIDGVRA VTVVVPSRTV IVEHDLAAVS QSHIVKALNK AGLEASVRAY
101: GSSGVVARWP SPYTVASGAL LLASLFAPLL PSLRWLALAA ACAGAPPMVL RALAAGLALD INALMLVAVA GAAALGDYAE AGAIVFLFTT AEWLETLACT
201: KASAGMSSLM SMVPPTVVLA QTGEVVGVRD VGVGAVVAVR AGEVVPVDGV VVDGQSEVDE SSLTGESFPV PKQPQAEVWA GTMNLDGYIA VRTTALADNS
301: TVARMQRLVE AAQNSRSKTQ RLVDSCAKYY TPAVVAVAAG VALVPLLLGP RGAQDPKRWF QLALVLLVSA CPCALVLSTP VATFCALLRA ARMGVLIKGG
401: DVLESLGEIR VAAFDKTGTI TKGEFSVHGF HVVGDKVGMS QLLYWVSSIE SKSSHPMATA LVEYAQSKSI QPEPTSVTDF RIYPGEGISG AINGRQIFIG
501: NTRIMARSSC YAAGAGPEME GQQGASIGHV IVDGDHVAAF SLSDDCRTGA AEAIRELRSM GIRSVMLTGD SKAAASRAQR QLGGALEEVH SELLPADKVA
601: LVGDLKARAG PTLMVGDGMN DAPALATADV GVAMGLSGSA AAMETSHATL MSSDLLRVPA AVRLGRRARA TVAANVIASV GAKAAVLALA AAWRPALWVA
701: VLADVGTCLL VVLHSMLLLW DPAGAGWRRR GGGGDPEACR ATARSLAMRS QLAEASNGAA GTAQGRRPGG GTKAGCHCCR ETSEPSEQDH TAVVVDIPAP
801: SAERPGVVAP TAATGCCSSS AREACATPTT VTTVNSAPRG CCGGIGEGDT RENARTSCCT DARDSPKKAG QQCNARCCSW GKQNTLKCQA QDTISNLK

Best Arabidopsis Sequence Match ( AT2G19110.1 )
(BLAST)

0001: MALQNKEEEK KKVKKLQKSY FDVLGICCTS EVPIIENILK SLDGVKEYSV IVPSRTVIVV HDSLLISPFQ IAKALNEARL EANVRVNGET SFKNKWPSPF
0101: AVVSGLLLLL SFLKFVYSPL RWLAVAAVAA GIYPILAKAF ASIKRPRIDI NILVIITVIA TLAMQDFMEA AAVVFLFTIS DWLETRASYK ATSVMQSLMS
0201: LAPQKAIIAE TGEEVEVDEV KVDTVVAVKA GETIPIDGIV VDGNCEVDEK TLTGEAFPVP KQRDSTVWAG TINLNGYICV KTTSLAGDCV VAKMAKLVEE
0301: AQSSKTKSQR LIDKCSQYYT PAIILVSACV AIVPVIMKVH NLKHWFHLAL VVLVSGCPCG LILSTPVATF CALTKAATSG LLIKSADYLD TLSKIKIVAF
0401: DKTGTITRGE FIVIDFKSLS RDINLRSLLY WVSSVESKSS HPMAATIVDY AKSVSVEPRP EEVEDYQNFP GEGIYGKIDG NDIFIGNKKI ASRAGCSTVP
0501: EIEVDTKGGK TVGYVYVGER LAGFFNLSDA CRSGVSQAMA ELKSLGIKTA MLTGDNQAAA MHAQEQLGNV LDVVHGDLLP EDKSRIIQEF KKEGPTAMVG
0601: DGVNDAPALA TADIGISMGI SGSALATQTG NIILMSNDIR RIPQAVKLAR RARRKVVENV CLSIILKAGI LALAFAGHPL IWAAVLVDVG TCLLVIFNSM
0701: LLLREKKKIG NKKCYRASTS KLNGRKLEGD DDYVVDLEAG LLTKSGNGQC KSSCCGDKKN QENVVMMKPS SKTSSDHSHP GCCGDKKEEK VKPLVKDGCC
0801: SEKTRKSEGD MVSLSSCKKS SHVKHDLKMK GGSGCCASKN EKGKEVVAKS CCEKPKQQVE SVGDCKSGHC EKKKQAEDIV VPVQIIGHAL THVEIELQTK
0901: ETCKTSCCDS KEKVKETGLL LSSENTPYLE KGVLIKDEGN CKSGSENMGT VKQSCHEKGC SDEKQTGEIT LASEEETDDQ DCSSGCCVNE GTVKQSFDEK
1001: KHSVLVEKEG LDMETGFCCD AKLVCCGNTE GEVKEQCRLE IKKEEHCKSG CCGEEIQTGE ITLVSEEETE STNCSTGCCV DKEEVTQTCH EKPASLVVSG
1101: LEVKKDEHCE SSHRAVKVET CCKVKIPEAC ASKCRDRAKR HSGKSCCRSY AKELCSHRHH HHHHHHHHHV SA

Arabidopsis Description

HMA4Putative cadmium/zinc-transporting ATPase HMA4 [Source:UniProtKB/Swiss-Prot;Acc:O64474]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.