CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
plastid 1
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, endoplasmic reticulum, plasma membrane, plastid
BaCelLo:	cytosol
ChloroP:	plastid
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX68625	Canola	plasma membrane	77.12	76.16
CDY69511	Canola	plasma membrane	73.09	73.6
CDY30170	Canola	cytosol, peroxisome, plasma membrane	80.31	66.17
CDY62400	Canola	plasma membrane	80.03	66.17
CDX68623	Canola	cytosol, endoplasmic reticulum, plasma membrane	46.32	61.17
CDY69827	Canola	plasma membrane	52.57	60.16
AT4G30110.1	Thale cress	plasma membrane	76.7	58.15
CDX68627	Canola	cytosol, plasma membrane, vacuole	53.26	50.66
CDY28160	Canola	cytosol	52.7	50.13
VIT_11s0103g00370.t01	Wine grape	plasma membrane	49.24	49.44
KRH02816	Soybean	plasma membrane	50.62	48.8
CDY51647	Canola	golgi, plasma membrane, vacuole	23.3	48.55
CDY72630	Canola	golgi, plasma membrane, vacuole	21.64	44.83
CDY51090	Canola	cytosol	66.99	44.39
CDY36489	Canola	cytosol	68.24	42.82
TraesCS7B01G320900.1	Wheat	plasma membrane	44.8	42.17
GSMUA_Achr5P22660_001	Banana	plasma membrane	44.52	39.29
CDY51646	Canola	cytosol, plasma membrane, vacuole	10.54	38.97
HORVU5Hr1G094430.8	Barley	endoplasmic reticulum, plasma membrane	39.39	37.12
TraesCS7A01G420000.1	Wheat	plasma membrane	46.74	35.89
TraesCS7D01G412800.1	Wheat	plasma membrane	46.6	35.56
KRH19069	Soybean	plasma membrane	53.81	35.4
TraesCS5B01G388000.1	Wheat	plasma membrane	40.5	35.22
TraesCS5A01G383400.1	Wheat	plasma membrane	39.67	35.05
GSMUA_Achr8P24660_001	Banana	cytosol	45.63	34.96
CDY51690	Canola	cytosol, plasma membrane, vacuole	8.18	34.5
HORVU7Hr1G097210.4	Barley	plasma membrane	45.22	34.46
TraesCS5D01G392700.1	Wheat	plasma membrane	40.5	34.23
GSMUA_Achr5P21940_001	Banana	extracellular, plasma membrane	44.24	34.12
TraesCS7A01G419500.1	Wheat	plasma membrane	46.32	33.91
CDY51648	Canola	cytosol	3.19	33.82
TraesCS7D01G412400.1	Wheat	plasma membrane	46.88	33.7
HORVU7Hr1G097240.1	Barley	plasma membrane	47.02	33.6
TraesCS7B01G320100.2	Wheat	plasma membrane	47.02	33.14
Os06t0700700-02	Rice	plasma membrane	47.43	32.05
EER96099	Sorghum	cytosol	39.53	31.84
Zm00001d005190_P001	Maize	plastid	39.53	31.74
CDY08717	Canola	cytosol, nucleus, plasma membrane	68.38	31.62
EER90320	Sorghum	plasma membrane	46.74	31.52
EER96100	Sorghum	cytosol	40.64	31.4
Zm00001d005189_P001	Maize	plasma membrane	41.19	30.81
Zm00001d014669_P007	Maize	plasma membrane	46.46	30.48
Os07t0232900-01	Rice	cytosol, nucleus, plasma membrane	42.16	30.28
Solyc07g009130.2.1	Tomato	plastid	52.84	29.26
CDY67922	Canola	cytosol	9.29	28.15
CDY67984	Canola	cytosol, peroxisome, plasma membrane	8.74	25.71
Zm00001d019226_P003	Maize	cytosol	29.13	23.52
CDX91834	Canola	cytosol, peroxisome, plasma membrane	21.64	18.18
CDX75636	Canola	mitochondrion	18.59	16.4
CDX69288	Canola	plastid	18.59	16.36
CDY46080	Canola	plastid	15.26	16.3
CDY16605	Canola	plastid	19.14	15.59
CDX92394	Canola	plastid	19.14	15.59
CDY39400	Canola	cytosol	21.22	15.32
CDY50396	Canola	cytosol	20.67	15.31
CDY50771	Canola	cytosol	21.08	15.29
CDY49160	Canola	cytosol	20.11	14.9
CDX75363	Canola	plastid	19.28	14.83
CDY34353	Canola	mitochondrion	21.22	14.83
CDX93870	Canola	endoplasmic reticulum, plasma membrane	14.98	14.79
CDX68986	Canola	plastid	18.86	14.53
CDY25498	Canola	mitochondrion	20.8	14.51
CDY26408	Canola	golgi, nucleus, plasma membrane	2.91	12.14
CDY69037	Canola	cytosol	8.88	10.96
CDY67659	Canola	cytosol	8.88	10.76
CDY67923	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	2.08	8.98

Protein Annotations

Gene3D:2.70.150.20	MapMan:24.1.2.1.1	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	GO:A0A078GRV9	UniProt:A0A078GRV9
InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	EnsemblPlants:CDY28206	ProteinID:CDY28206	ProteinID:CDY28206.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:GSBRNA2T00039930001
InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	InterPro:IPR023299	PFAM:PF00122	PFAM:PF00702
PANTHER:PTHR43338	InterPro:P_typ_ATPase	SUPFAM:SSF56784	SUPFAM:SSF81653	TIGRFAMs:TIGR01494	TMHMM:TMhelix
UniParc:UPI0004EDDC13	SEG:seg	:	:	:	:

Description

BnaA01g06430DBnaA01g06430D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GRV9]

Coordinates

chrLK032216:+:265053..268971

Molecular Weight (calculated)

77210.3 Da

IEP (calculated)

7.696

GRAVY (calculated)

-0.000

Length

721 amino acids

Sequence
(BLAST)

001: MVAVKALNQA RLEANVSVTG ETNFKNKWPS PFAVVSGVLL LLSFFKYVYS PFRWLAVAAV VAGIYPILAK SVASIARARI DINILVVITV GATLGMRDYT
101: EAAAVVFLFT IAEWLQSRAS YKASAVMQSL MSLAPQKAVI AETGEEVGVD ELKINTVIAV KAGETIPIDG VVVDGNCEVD EKTLTGEAFP VPKLRDSTVW
201: AGTINLNGYI TVKTTALAED CVTNVLSSIL QRSSSYRSVL WLSHSHRRGE FIVIDFKSLS RDISLNSLLY WVSSVESKSS HPMAAALVDY AKSVSVEPEP
301: EAVVDDQNFP GEGIHGNIDG KKVYIGNKRI ASRAGRSSDI DVDTKGGKTV GYVYVGETLA GLFNLSDACR SGVAQAMKEL KSMGIKTAML TGDNQAAAMY
401: AQEQLGNVMD VVHAALLPEG KSQIIKEFKR EGPRAMVGDG LNDAPALATA DIGISMGVSG SALATETGHI ILMSNDIRRI PQAIRLARRG KRKVVENVVL
501: SITMKGAILA LAFAGNPLIW AAVLADVGTC LLVILNSMLL LRDAHVPGDK CHRAEKHEGD VVGDMEAGLL PKHCKSGCCG KEKQEVVMKP AKTISGHGHS
601: GCCDKKHKVD VMIVRKSCES RCCGDKIQQQ PNQDEVKQSC HNKAGELKEI RLDLGDSDCK SGSPLVKGCC SRPDADPVVA SLKVKSDGSC SESSRKGNNE
701: EACCEVKTVQ QEVSPTPHNL L

Best Arabidopsis Sequence Match ( AT2G19110.1 )
(BLAST)

0001: MALQNKEEEK KKVKKLQKSY FDVLGICCTS EVPIIENILK SLDGVKEYSV IVPSRTVIVV HDSLLISPFQ IAKALNEARL EANVRVNGET SFKNKWPSPF
0101: AVVSGLLLLL SFLKFVYSPL RWLAVAAVAA GIYPILAKAF ASIKRPRIDI NILVIITVIA TLAMQDFMEA AAVVFLFTIS DWLETRASYK ATSVMQSLMS
0201: LAPQKAIIAE TGEEVEVDEV KVDTVVAVKA GETIPIDGIV VDGNCEVDEK TLTGEAFPVP KQRDSTVWAG TINLNGYICV KTTSLAGDCV VAKMAKLVEE
0301: AQSSKTKSQR LIDKCSQYYT PAIILVSACV AIVPVIMKVH NLKHWFHLAL VVLVSGCPCG LILSTPVATF CALTKAATSG LLIKSADYLD TLSKIKIVAF
0401: DKTGTITRGE FIVIDFKSLS RDINLRSLLY WVSSVESKSS HPMAATIVDY AKSVSVEPRP EEVEDYQNFP GEGIYGKIDG NDIFIGNKKI ASRAGCSTVP
0501: EIEVDTKGGK TVGYVYVGER LAGFFNLSDA CRSGVSQAMA ELKSLGIKTA MLTGDNQAAA MHAQEQLGNV LDVVHGDLLP EDKSRIIQEF KKEGPTAMVG
0601: DGVNDAPALA TADIGISMGI SGSALATQTG NIILMSNDIR RIPQAVKLAR RARRKVVENV CLSIILKAGI LALAFAGHPL IWAAVLVDVG TCLLVIFNSM
0701: LLLREKKKIG NKKCYRASTS KLNGRKLEGD DDYVVDLEAG LLTKSGNGQC KSSCCGDKKN QENVVMMKPS SKTSSDHSHP GCCGDKKEEK VKPLVKDGCC
0801: SEKTRKSEGD MVSLSSCKKS SHVKHDLKMK GGSGCCASKN EKGKEVVAKS CCEKPKQQVE SVGDCKSGHC EKKKQAEDIV VPVQIIGHAL THVEIELQTK
0901: ETCKTSCCDS KEKVKETGLL LSSENTPYLE KGVLIKDEGN CKSGSENMGT VKQSCHEKGC SDEKQTGEIT LASEEETDDQ DCSSGCCVNE GTVKQSFDEK
1001: KHSVLVEKEG LDMETGFCCD AKLVCCGNTE GEVKEQCRLE IKKEEHCKSG CCGEEIQTGE ITLVSEEETE STNCSTGCCV DKEEVTQTCH EKPASLVVSG
1101: LEVKKDEHCE SSHRAVKVET CCKVKIPEAC ASKCRDRAKR HSGKSCCRSY AKELCSHRHH HHHHHHHHHV SA

Arabidopsis Description

HMA4Putative cadmium/zinc-transporting ATPase HMA4 [Source:UniProtKB/Swiss-Prot;Acc:O64474]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.