CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, peroxisome, plasma membrane
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY62400	Canola	plasma membrane	95.31	95.64
Bra024107.1-P	Field mustard	plasma membrane	92.57	91.73
CDY69511	Canola	plasma membrane	70.29	85.89
CDX68625	Canola	plasma membrane	70.51	84.52
CDY28206	Canola	plasma membrane	66.17	80.31
AT4G30110.1	Thale cress	plasma membrane	84.0	77.29
CDX68623	Canola	cytosol, endoplasmic reticulum, plasma membrane	48.11	77.11
CDY69827	Canola	plasma membrane	54.74	76.03
CDY51647	Canola	golgi, plasma membrane, vacuole	27.43	69.36
CDX68627	Canola	cytosol, plasma membrane, vacuole	60.0	69.26
CDY28160	Canola	cytosol	59.54	68.73
VIT_11s0103g00370.t01	Wine grape	plasma membrane	55.2	67.27
CDY72630	Canola	golgi, plasma membrane, vacuole	25.14	63.22
KRH02816	Soybean	plasma membrane	52.0	60.83
CDY51646	Canola	cytosol, plasma membrane, vacuole	13.37	60.0
CDY51690	Canola	cytosol, plasma membrane, vacuole	11.66	59.65
CDY51090	Canola	cytosol	72.8	58.55
TraesCS7B01G320900.1	Wheat	plasma membrane	49.71	56.79
CDY36489	Canola	cytosol	74.06	56.4
GSMUA_Achr5P22660_001	Banana	plasma membrane	51.43	55.08
HORVU5Hr1G094430.8	Barley	endoplasmic reticulum, plasma membrane	44.57	50.98
TraesCS7A01G420000.1	Wheat	plasma membrane	51.66	48.14
TraesCS5B01G388000.1	Wheat	plasma membrane	45.49	48.01
KRH19069	Soybean	plasma membrane	60.0	47.9
GSMUA_Achr8P24660_001	Banana	cytosol	51.31	47.72
TraesCS5A01G383400.1	Wheat	plasma membrane	44.46	47.67
TraesCS7D01G412800.1	Wheat	plasma membrane	51.43	47.62
GSMUA_Achr5P21940_001	Banana	extracellular, plasma membrane	50.29	47.06
HORVU7Hr1G097210.4	Barley	plasma membrane	50.63	46.83
TraesCS5D01G392700.1	Wheat	plasma membrane	44.91	46.07
TraesCS7D01G412400.1	Wheat	plasma membrane	52.57	45.86
TraesCS7A01G419500.1	Wheat	plasma membrane	51.43	45.69
HORVU7Hr1G097240.1	Barley	plasma membrane	52.23	45.29
TraesCS7B01G320100.2	Wheat	plasma membrane	51.89	44.38
Os06t0700700-02	Rice	plasma membrane	52.69	43.21
EER96099	Sorghum	cytosol	44.0	43.02
Zm00001d005190_P001	Maize	plastid	44.0	42.87
EER96100	Sorghum	cytosol	45.37	42.55
EER90320	Sorghum	plasma membrane	51.77	42.38
CDY08717	Canola	cytosol, nucleus, plasma membrane	74.06	41.57
Zm00001d005189_P001	Maize	plasma membrane	45.71	41.49
Zm00001d014669_P007	Maize	plasma membrane	50.97	40.58
Os07t0232900-01	Rice	cytosol, nucleus, plasma membrane	46.29	40.34
CDY51648	Canola	cytosol	3.09	39.71
Solyc07g009130.2.1	Tomato	plastid	57.14	38.4
Zm00001d019226_P003	Maize	cytosol	33.94	33.26
CDY26408	Canola	golgi, nucleus, plasma membrane	6.4	32.37
CDY67922	Canola	cytosol	7.43	27.31
CDY67984	Canola	cytosol, peroxisome, plasma membrane	7.43	26.53
CDY67923	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	4.91	25.75
CDX91834	Canola	cytosol, peroxisome, plasma membrane	23.31	23.78
CDY16605	Canola	plastid	22.74	22.49
CDX92394	Canola	plastid	22.74	22.49
CDX75636	Canola	mitochondrion	20.23	21.66
CDY50771	Canola	cytosol	24.46	21.53
CDY39400	Canola	cytosol	24.57	21.52
CDX69288	Canola	plastid	20.11	21.49
CDY50396	Canola	cytosol	22.97	20.66
CDX93870	Canola	endoplasmic reticulum, plasma membrane	17.03	20.41
CDX75363	Canola	plastid	21.83	20.38
CDY49160	Canola	cytosol	22.51	20.25
CDX68986	Canola	plastid	21.49	20.09
CDY34353	Canola	mitochondrion	23.54	19.96
CDY46080	Canola	plastid	15.31	19.85
CDY25498	Canola	mitochondrion	23.43	19.83
CDY69037	Canola	cytosol	10.63	15.92
CDY67659	Canola	cytosol	10.4	15.29

Protein Annotations

Gene3D:2.70.150.20	MapMan:24.1.2.1.1	Gene3D:3.30.70.100	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	GO:A0A078GUJ4
UniProt:A0A078GUJ4	InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	EnsemblPlants:CDY30170
ProteinID:CDY30170	ProteinID:CDY30170.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215
GO:GO:0005488	GO:GO:0005575	GO:GO:0006810	GO:GO:0006812	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0019829	GO:GO:0030001	GO:GO:0046872	GO:GO:0099132
EnsemblPlantsGene:GSBRNA2T00044756001	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:IPR006121
InterPro:IPR023214	InterPro:IPR023299	InterPro:P-typ_ATPase_IB	PFAM:PF00122	PFAM:PF00702	PRINTS:PR00119
PRINTS:PR00120	ScanProsite:PS00154	PFscan:PS50846	PANTHER:PTHR43338	InterPro:P_typ_ATPase	SUPFAM:SSF55008
SUPFAM:SSF56784	SUPFAM:SSF81653	SUPFAM:SSF81665	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01512	TIGRFAMs:TIGR01525
TMHMM:TMhelix	UniParc:UPI0004EDC9FB	SEG:seg	:	:	:

Description

BnaA03g50000DBnaA03g50000D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GUJ4]

Coordinates

chrLK032250:+:15859..20183

Molecular Weight (calculated)

94570.6 Da

IEP (calculated)

8.336

GRAVY (calculated)

-0.014

Length

875 amino acids

Sequence
(BLAST)

001: MASKNDKKMT KSYFDVLGIC CTSEVPLIEN ILKSLDGIKK YSVIVPSRTV IVVHDSLIIS QFHIVKALNQ ARLEANVRVT GETNFKNKWP SPFAVVSGVL
101: LLLSFFKYLY SPFRWLAVAA VVAGIYPILA KSIASIARTR IDINVLVVIT VGATLGMRDY TEAAAVVFLF TIAEWLQSRA SYKASAVMQS LMSLSPQKAV
201: IAETGEEVKV DELKINTVIA VKAGETIPVD GVVVDGNCEV DEKTLTGEAF PVPKLRDSTV WAGTINLNGY ITVKTTSLAE DCVVAKMAKL VEEAQNSKTE
301: TQRFIDQCSK YYTPAIIIIS LCFVVIPFAL KAHNMKHWLH LALVVLVSAC PCGLILSTPV ATFCALTKAA TSGLLIKGAD YLETLAKIKT VAFDKTGTIT
401: RGEFIVTDFK SLSRDISLHS LLYWVSSVES KSSHPMAAAL VDYAKSVSNE PKPEAVEEYQ NFPGEGIYGK IDRKEVYIGN KRIASRAGCS SVPDTGVDTK
501: GGKTVGYVYV GETLAGSFNL SDACRSGVAQ AMKELKSLGI KTAMLTGDNQ AAAMHAQEQL GNAIDIIHAE LLPEGKSEII KEFKREGPTA MVGDGLNDAP
601: ALATADIGIS MGISGSALAT ETGNIILMSN DIRRIPQAIR LARRAKRKVV ENVVLSITMK GAILGLAFAG YPLIWAAVLA DVGTCLLVIF NSMLLLRDKQ
701: KGGNKCYRSS SSPCVLNAEK HEGDAAGDME AGLLPPTRSD KHCKSSCCGK KNREKVMKPH HGHSGCCDKK QKDNVKIVRK SCESGCCGSG NKTQKPDQEE
801: VKHSCHDMPS EEIRLDAVSV KGCCSRPAEH VVASLKVKSN GHCESSKEDK EETCSEVKMN CGSRERSHSH DHHHA

Best Arabidopsis Sequence Match ( AT4G30110.2 )
(BLAST)

001: MASKKMTKSY FDVLGICCTS EVPLIENILN SMDGVKEFSV IVPSRTVIVV HDTLILSQFQ IVKALNQAQL EANVRVTGET NFKNKWPSPF AVVSGILLLL
101: SFFKYLYSPF RWLAVAAVVA GIYPILAKAV ASLARFRIDI NILVVVTVGA TIGMQDYTEA AVVVFLFTIA EWLQSRASYK ASAVMQSLMS LAPQKAVIAE
201: TGEEVEVDEL KTNTVIAVKA GETIPIDGVV VDGNCEVDEK TLTGEAFPVP KLKDSTVWAG TINLNGYITV NTTALAEDCV VAKMAKLVEE AQNSKTETQR
301: FIDKCSKYYT PAIILISICF VAIPFALKVH NLKHWVHLAL VVLVSACPCG LILSTPVATF CALTKAATSG LLIKGADYLE TLAKIKIVAF DKTGTITRGE
401: FIVMDFQSLS EDISLQSLLY WVSSTESKSS HPMAAAVVDY ARSVSVEPKP EAVEDYQNFP GEGIYGKIDG KEVYIGNKRI ASRAGCLSVP DIDVDTKGGK
501: TIGYVYVGET LAGVFNLSDA CRSGVAQAMK ELKSLGIKIA MLTGDNHAAA MHAQEQLGNA MDIVRAELLP EDKSEIIKQL KREEGPTAMV GDGLNDAPAL
601: ATADIGISMG VSGSALATET GNIILMSNDI RRIPQAIKLA KRAKRKVVEN VVISITMKGA ILALAFAGHP LIWAAVLADV GTCLLVILNS MLLLSDKHKT
701: GNKCYRESSS SSVLIAEKLE GDAAGDMEAG LLPKISDKHC KPGCCGTKTQ EKAMKPAKAS SDHSHSGCCE TKQKDNVTVV KKSCCAEPVD LGHGHDSGCC
801: GDKSQQPHQH EVQVQQSCHN KPSGLDSGCC GGKSQQPHQH ELQQSCHDKP SGLDIGTGPK HEGSSTLVNL EGDAKEELKV LVNGFCSSPA DLAITSLKVK
901: SDSHCKSNCS SRERCHHGSN CCRSYAKESC SHDHHHTRAH GVGTLKEIVI E

Arabidopsis Description

HMA2Cadmium/zinc-transporting ATPase HMA2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZW4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.