CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
peroxisome 1
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 5
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, peroxisome, secretory
BaCelLo:	cytosol
MultiLoc:	peroxisome
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX68625	Canola	plasma membrane	94.13	92.33
CDX68623	Canola	cytosol, endoplasmic reticulum, plasma membrane	66.9	87.73
Bra011164.1-P	Field mustard	cytosol, plasma membrane	99.86	82.0
CDY69827	Canola	plasma membrane	66.34	75.4
CDY28206	Canola	plasma membrane	73.6	73.09
CDY30170	Canola	cytosol, peroxisome, plasma membrane	85.89	70.29
CDY62400	Canola	plasma membrane	85.06	69.84
CDY51647	Canola	golgi, plasma membrane, vacuole	32.96	68.21
AT4G30110.1	Thale cress	plasma membrane	82.26	61.93
CDX68627	Canola	cytosol, plasma membrane, vacuole	58.24	55.01
VIT_11s0103g00370.t01	Wine grape	plasma membrane	54.89	54.74
KRH02816	Soybean	plasma membrane	56.7	54.28
CDY28160	Canola	cytosol	57.26	54.09
TraesCS7B01G320900.1	Wheat	plasma membrane	49.86	46.61
CDY51090	Canola	cytosol	70.39	46.32
CDY36489	Canola	cytosol	72.77	45.34
GSMUA_Achr5P22660_001	Banana	plasma membrane	49.86	43.7
HORVU5Hr1G094430.8	Barley	endoplasmic reticulum, plasma membrane	44.27	41.44
KRH19069	Soybean	plasma membrane	61.17	39.96
TraesCS7A01G420000.1	Wheat	plasma membrane	52.37	39.94
TraesCS7D01G412800.1	Wheat	plasma membrane	51.96	39.37
TraesCS5A01G383400.1	Wheat	plasma membrane	44.83	39.34
HORVU7Hr1G097210.4	Barley	plasma membrane	51.68	39.11
TraesCS5B01G388000.1	Wheat	plasma membrane	45.25	39.08
GSMUA_Achr8P24660_001	Banana	cytosol	50.7	38.58
TraesCS7A01G419500.1	Wheat	plasma membrane	52.79	38.38
TraesCS7D01G412400.1	Wheat	plasma membrane	53.49	38.19
HORVU7Hr1G097240.1	Barley	plasma membrane	53.63	38.06
TraesCS5D01G392700.1	Wheat	plasma membrane	44.97	37.75
GSMUA_Achr5P21940_001	Banana	extracellular, plasma membrane	49.16	37.65
TraesCS7B01G320100.2	Wheat	plasma membrane	53.49	37.44
Os06t0700700-02	Rice	plasma membrane	53.63	35.99
EER96099	Sorghum	cytosol	44.83	35.87
EER90320	Sorghum	plasma membrane	53.21	35.64
Zm00001d005190_P001	Maize	plastid	44.13	35.19
EER96100	Sorghum	cytosol	45.39	34.83
CDY72630	Canola	golgi, plasma membrane, vacuole	16.76	34.48
Zm00001d014669_P007	Maize	plasma membrane	52.65	34.3
CDY51648	Canola	cytosol	3.21	33.82
Zm00001d005189_P001	Maize	plasma membrane	45.25	33.61
CDY08717	Canola	cytosol, nucleus, plasma membrane	73.04	33.55
Os07t0232900-01	Rice	cytosol, nucleus, plasma membrane	46.37	33.07
CDY26408	Canola	golgi, nucleus, plasma membrane	7.82	32.37
Solyc07g009130.2.1	Tomato	plastid	57.12	31.41
Zm00001d019226_P003	Maize	cytosol	35.75	28.67
CDY67922	Canola	cytosol	9.5	28.57
CDY67984	Canola	cytosol, peroxisome, plasma membrane	8.94	26.12
CDY67923	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	5.73	24.55
CDX91834	Canola	cytosol, peroxisome, plasma membrane	25.0	20.86
CDX75636	Canola	mitochondrion	22.91	20.07
CDX69288	Canola	plastid	22.77	19.9
CDX92394	Canola	plastid	23.32	18.87
CDY16605	Canola	plastid	23.32	18.87
CDX93870	Canola	endoplasmic reticulum, plasma membrane	18.72	18.36
CDY46080	Canola	plastid	17.18	18.22
CDY39400	Canola	cytosol	25.14	18.02
CDY50771	Canola	cytosol	25.0	18.01
CDY50396	Canola	cytosol	24.44	17.99
CDY49160	Canola	cytosol	24.3	17.88
CDY34353	Canola	mitochondrion	25.14	17.44
CDX75363	Canola	plastid	22.77	17.4
CDX68986	Canola	plastid	22.63	17.31
CDY25498	Canola	mitochondrion	24.86	17.21
CDY69037	Canola	cytosol	8.1	9.93
CDY67659	Canola	cytosol	8.1	9.75
CDY51646	Canola	cytosol, plasma membrane, vacuole	2.37	8.72
CDY51690	Canola	cytosol, plasma membrane, vacuole	0.7	2.92

Protein Annotations

Gene3D:2.70.150.20	MapMan:24.1.2.1.1	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	GO:A0A078JV90	UniProt:A0A078JV90
InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	EnsemblPlants:CDY69511	ProteinID:CDY69511
ProteinID:CDY69511.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488
GO:GO:0005575	GO:GO:0006810	GO:GO:0006812	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0019829	GO:GO:0099132	EnsemblPlantsGene:GSBRNA2T00088467001	InterPro:HAD-like_sf	InterPro:HAD_sf
InterPro:IPR023214	InterPro:IPR023299	InterPro:P-typ_ATPase_IB	PFAM:PF00122	PFAM:PF00702	PRINTS:PR00119
ScanProsite:PS00154	PANTHER:PTHR43338	InterPro:P_typ_ATPase	SUPFAM:SSF56784	SUPFAM:SSF81653	SUPFAM:SSF81665
TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01512	TIGRFAMs:TIGR01525	TMHMM:TMhelix	UniParc:UPI0004EE6DE2	SEG:seg

Description

BnaAnng30640DBnaAnng30640D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JV90]

Coordinates

chrLK039593:-:769..3701

Molecular Weight (calculated)

77265.2 Da

IEP (calculated)

6.769

GRAVY (calculated)

-0.081

Length

716 amino acids

Sequence
(BLAST)

001: MRDYTEAAAV VFLFTIAEWL QSRASYKASA VMQSLMSLAP QKAVIAETGE EVEVDELKIN TVIAVKAGET ISIDGVVVDG NCEVDEKTLT GEAFPVPKLR
101: DSTVWAGTIN LNGYITVKTT ALAEDCVVAK MAKLVEEAQN SKTETQRFID ECSKYYTPAI ILISLCFVVI PFALKVHNMK HWLHLALVVL VSACPCGLIL
201: STPVATFCAL TKAATSGLLI KGADYLETLA KIKTVAFDKT GTITRGEFIV MDFKSLSRDI SLHSLLYWVS SVESKSSHPM AAALVDYAKS ISVEPKPEAV
301: EDYQNFPGEG IHGKIDGKEV YIGNKRIASR AGCSSVPDID VDTKGGKTVG YVYLGETLAG VFNLSDACRS GVAQAMKELK SMGIKTAMLT GDNQASAMHA
401: QEQLGNVMDV VHAELLPEGK SQIIKEFKRE GPTAMVGDGL NDAPALATAD IGISMGVSGS ALATETGHII LMSNDIRRIP QAIRLARRGK RKVVENVVLS
501: ITMKGAILAL AFAGHPLIWA AVLADVGTCL LVILNSMLLL RDVHVPGGKC HRAEKGACDV VGDMEAGLLP KHCKSGCCGK KNQQEVMKLD KTSEGHGHSG
601: CCDKKREDKV MIVRKRCESR CCGDKIQQRD QDEVKQSCHN KAGDTEEIRL DISVKGCCSR PVADPVVASD GHRESSCCES SRKGNNEEAC CEVETNESNC
701: SSREKHHSHC HSHHHE

Best Arabidopsis Sequence Match ( AT2G19110.1 )
(BLAST)

0001: MALQNKEEEK KKVKKLQKSY FDVLGICCTS EVPIIENILK SLDGVKEYSV IVPSRTVIVV HDSLLISPFQ IAKALNEARL EANVRVNGET SFKNKWPSPF
0101: AVVSGLLLLL SFLKFVYSPL RWLAVAAVAA GIYPILAKAF ASIKRPRIDI NILVIITVIA TLAMQDFMEA AAVVFLFTIS DWLETRASYK ATSVMQSLMS
0201: LAPQKAIIAE TGEEVEVDEV KVDTVVAVKA GETIPIDGIV VDGNCEVDEK TLTGEAFPVP KQRDSTVWAG TINLNGYICV KTTSLAGDCV VAKMAKLVEE
0301: AQSSKTKSQR LIDKCSQYYT PAIILVSACV AIVPVIMKVH NLKHWFHLAL VVLVSGCPCG LILSTPVATF CALTKAATSG LLIKSADYLD TLSKIKIVAF
0401: DKTGTITRGE FIVIDFKSLS RDINLRSLLY WVSSVESKSS HPMAATIVDY AKSVSVEPRP EEVEDYQNFP GEGIYGKIDG NDIFIGNKKI ASRAGCSTVP
0501: EIEVDTKGGK TVGYVYVGER LAGFFNLSDA CRSGVSQAMA ELKSLGIKTA MLTGDNQAAA MHAQEQLGNV LDVVHGDLLP EDKSRIIQEF KKEGPTAMVG
0601: DGVNDAPALA TADIGISMGI SGSALATQTG NIILMSNDIR RIPQAVKLAR RARRKVVENV CLSIILKAGI LALAFAGHPL IWAAVLVDVG TCLLVIFNSM
0701: LLLREKKKIG NKKCYRASTS KLNGRKLEGD DDYVVDLEAG LLTKSGNGQC KSSCCGDKKN QENVVMMKPS SKTSSDHSHP GCCGDKKEEK VKPLVKDGCC
0801: SEKTRKSEGD MVSLSSCKKS SHVKHDLKMK GGSGCCASKN EKGKEVVAKS CCEKPKQQVE SVGDCKSGHC EKKKQAEDIV VPVQIIGHAL THVEIELQTK
0901: ETCKTSCCDS KEKVKETGLL LSSENTPYLE KGVLIKDEGN CKSGSENMGT VKQSCHEKGC SDEKQTGEIT LASEEETDDQ DCSSGCCVNE GTVKQSFDEK
1001: KHSVLVEKEG LDMETGFCCD AKLVCCGNTE GEVKEQCRLE IKKEEHCKSG CCGEEIQTGE ITLVSEEETE STNCSTGCCV DKEEVTQTCH EKPASLVVSG
1101: LEVKKDEHCE SSHRAVKVET CCKVKIPEAC ASKCRDRAKR HSGKSCCRSY AKELCSHRHH HHHHHHHHHV SA

Arabidopsis Description

HMA4Putative cadmium/zinc-transporting ATPase HMA4 [Source:UniProtKB/Swiss-Prot;Acc:O64474]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.