Factsheet for Zm00001d005189_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, secretory
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER96100	Sorghum	cytosol	81.43	84.14
Zm00001d005190_P001	Maize	plastid	63.28	67.93
Zm00001d019226_P003	Maize	cytosol	54.46	58.79
VIT_11s0103g00370.t01	Wine grape	plasma membrane	40.77	54.74
GSMUA_Achr5P22660_001	Banana	plasma membrane	45.95	54.22
CDY51647	Canola	golgi, plasma membrane, vacuole	18.98	52.89
AT4G30120.1	Thale cress	cytosol	28.84	51.29
Bra024103.1-P	Field mustard	peroxisome, plasma membrane, vacuole	39.21	49.48
CDY28160	Canola	cytosol	38.59	49.08
CDX68627	Canola	cytosol, plasma membrane, vacuole	38.49	48.94
CDY72630	Canola	golgi, plasma membrane, vacuole	17.63	48.85
Bra011165.1-P	Field mustard	cytosol	38.38	48.81
CDY69827	Canola	plasma membrane	30.81	47.14
GSMUA_Achr5P21940_001	Banana	extracellular, plasma membrane	45.64	47.06
KRH02816	Soybean	plasma membrane	36.51	47.06
GSMUA_Achr8P24660_001	Banana	cytosol	45.85	46.97
CDY51646	Canola	cytosol, plasma membrane, vacuole	9.44	46.67
Bra011164.1-P	Field mustard	cytosol, plasma membrane	41.49	45.87
CDY30170	Canola	cytosol, peroxisome, plasma membrane	41.49	45.71
CDY51690	Canola	cytosol, plasma membrane, vacuole	8.09	45.61
CDY69511	Canola	plasma membrane	33.61	45.25
CDY62400	Canola	plasma membrane	40.87	45.18
Zm00001d014669_P007	Maize	plasma membrane	51.35	45.04
CDX68625	Canola	plasma membrane	33.2	43.84
Bra024107.1-P	Field mustard	plasma membrane	39.21	42.81
KRH37273	Soybean	cytosol, plasma membrane, vacuole	38.8	42.26
AT4G30110.1	Thale cress	plasma membrane	41.39	41.96
CDY28206	Canola	plasma membrane	30.81	41.19
CDX68623	Canola	cytosol, endoplasmic reticulum, plasma membrane	21.16	37.36
KRH19069	Soybean	plasma membrane	41.6	36.59
CDY51090	Canola	cytosol	39.52	35.02
CDY36489	Canola	cytosol	40.56	34.03
AT2G19110.2	Thale cress	cytosol	41.29	33.96
Bra024449.1-P	Field mustard	cytosol	39.42	31.93
Solyc07g009130.2.1	Tomato	plastid	42.95	31.8
Bra038842.1-P	Field mustard	cytosol	40.04	30.37
Zm00001d027860_P001	Maize	plasma membrane	4.67	26.79
Zm00001d011553_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	4.88	25.68
CDY08717	Canola	cytosol, nucleus, plasma membrane	40.77	25.21
Zm00001d014569_P002	Maize	plastid	19.61	22.96
Zm00001d027884_P003	Maize	plastid	20.95	22.39
Zm00001d053783_P001	Maize	plasma membrane	22.82	22.04
Zm00001d015829_P003	Maize	plasma membrane	21.89	21.53
Zm00001d052801_P004	Maize	plastid	21.47	21.38
Zm00001d002708_P001	Maize	mitochondrion	21.47	20.72
Zm00001d046953_P002	Maize	cytosol, endoplasmic reticulum, plasma membrane	21.27	19.83
Zm00001d002705_P002	Maize	cytosol, plastid	21.27	19.79
CDY51648	Canola	cytosol	0.62	8.82

Protein Annotations

MapMan:24.1.2.1.1	Gene3D:3.30.70.100	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	UniProt:A0A1D6EKZ4	InterPro:ATPase_P-typ_P_site
InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005575	GO:GO:0006810	GO:GO:0006812
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0019829	GO:GO:0030001
GO:GO:0046872	GO:GO:0099132	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:HMA_dom	InterPro:HMA_dom_sf
InterPro:IPR006121	InterPro:IPR023214	InterPro:IPR023299	ProteinID:ONM20571.1	InterPro:P-typ_ATPase_IB	PFAM:PF00122
PFAM:PF00702	PRINTS:PR00119	ScanProsite:PS00154	PFscan:PS50846	PANTHER:PTHR43338	PANTHER:PTHR43338:SF2
InterPro:P_typ_ATPase	SUPFAM:SSF55008	SUPFAM:SSF56784	SUPFAM:SSF81653	SUPFAM:SSF81665	TIGRFAMs:TIGR01494
TIGRFAMs:TIGR01525	TMHMM:TMhelix	UniParc:UPI0008450F18	EnsemblPlantsGene:Zm00001d005189	EnsemblPlants:Zm00001d005189_P001	EnsemblPlants:Zm00001d005189_T001
SEG:seg	:	:	:	:	:

Description

Cadmium/zinc-transporting ATPase HMA2

Coordinates

chr2:-:163016710..163020248

Molecular Weight (calculated)

99580.3 Da

IEP (calculated)

8.161

GRAVY (calculated)

0.292

Length

964 amino acids

Sequence
(BLAST)

001: MEEQPVAKIL AGSAGARRLA FPLALGPCPW PSEMPGPAVE AAARGGGCCG KTAGKWEKTY LDVLGICCTA EVALVERLLA PINGVRAVTV VVPSRTVIVD
101: HDTAAVSQFH IVKVLNKAGL EASVRAYGSS AGAPGRWPSP FIVACGVLLA ASLFAPLLPP LRWLAVAAAC VGSQPMLLRA FAAAGKLTLD INILMLIAVA
201: GAVALGSYTE AGAIVFLFTV AEWLETLACT KASAGMLSLM SSVPKTVVLA ETGQVVGMGD VAVGTVVAVR AGDVVPVDGV VVGGQSEVDE SSLTGESFPV
301: PKQAQSEVWA GTINLDGMVT NNKLANSLGS SKLLLYSATM SIHFVLQMSC DAAGYISVRT TALAENSTVA KMERLVEEAQ NSRSRTQRLI DSCAKHYTPA
401: VVVLAAGVVL VPVLLGAPDL EHWFRLSLVL LVSACPCALV LSTPVATFCA LLRAARMGLL VKGGNVLESL GEVRVAAFDK TGTITRGEFS IKDFLVVRDK
501: VQMSQLLYWV SSIESKSSHP MAAALVEYAQ SKSIQPKPED VTETCIYHGE GIYGAINGKH IYIGNERIMA RSSCRQQEAG HRETDGLKGV SVGLVICDGD
601: LVGKFSLSDT CRTGAAEAIL QLRSMGIKSV MLTGDSEAAA KHAQEQLGGV LEELHSGLLP EDKVRLIRGL QARHGATLMV GDGMNDAPAL AAADVGVSMG
701: LSGSAAAIET SHATLMSGDV LRVPKAVRLG RRTRRTIAVN VASSVGAKAA VLALAVAWRP VLWVAVLADV GTCLLVVLHS MLLLRDAARA RRRCGGASKA
801: CCATACKAPK TACCATASKA CGATTVKPVA TRPQPAGAGK KADRPGGDKH GNGKDDCHRC CHKQSKLPED AVVIAIPVRA VEHRKDAAAH EKAEGNAAGG
901: CCGGAPASAA CCAEAHGGED EVCIVISARS PCCSTARSRS ASPKDAMCCG SGGKDGGAIS ALVC

Best Arabidopsis Sequence Match ( AT2G19110.1 )
(BLAST)

0001: MALQNKEEEK KKVKKLQKSY FDVLGICCTS EVPIIENILK SLDGVKEYSV IVPSRTVIVV HDSLLISPFQ IAKALNEARL EANVRVNGET SFKNKWPSPF
0101: AVVSGLLLLL SFLKFVYSPL RWLAVAAVAA GIYPILAKAF ASIKRPRIDI NILVIITVIA TLAMQDFMEA AAVVFLFTIS DWLETRASYK ATSVMQSLMS
0201: LAPQKAIIAE TGEEVEVDEV KVDTVVAVKA GETIPIDGIV VDGNCEVDEK TLTGEAFPVP KQRDSTVWAG TINLNGYICV KTTSLAGDCV VAKMAKLVEE
0301: AQSSKTKSQR LIDKCSQYYT PAIILVSACV AIVPVIMKVH NLKHWFHLAL VVLVSGCPCG LILSTPVATF CALTKAATSG LLIKSADYLD TLSKIKIVAF
0401: DKTGTITRGE FIVIDFKSLS RDINLRSLLY WVSSVESKSS HPMAATIVDY AKSVSVEPRP EEVEDYQNFP GEGIYGKIDG NDIFIGNKKI ASRAGCSTVP
0501: EIEVDTKGGK TVGYVYVGER LAGFFNLSDA CRSGVSQAMA ELKSLGIKTA MLTGDNQAAA MHAQEQLGNV LDVVHGDLLP EDKSRIIQEF KKEGPTAMVG
0601: DGVNDAPALA TADIGISMGI SGSALATQTG NIILMSNDIR RIPQAVKLAR RARRKVVENV CLSIILKAGI LALAFAGHPL IWAAVLVDVG TCLLVIFNSM
0701: LLLREKKKIG NKKCYRASTS KLNGRKLEGD DDYVVDLEAG LLTKSGNGQC KSSCCGDKKN QENVVMMKPS SKTSSDHSHP GCCGDKKEEK VKPLVKDGCC
0801: SEKTRKSEGD MVSLSSCKKS SHVKHDLKMK GGSGCCASKN EKGKEVVAKS CCEKPKQQVE SVGDCKSGHC EKKKQAEDIV VPVQIIGHAL THVEIELQTK
0901: ETCKTSCCDS KEKVKETGLL LSSENTPYLE KGVLIKDEGN CKSGSENMGT VKQSCHEKGC SDEKQTGEIT LASEEETDDQ DCSSGCCVNE GTVKQSFDEK
1001: KHSVLVEKEG LDMETGFCCD AKLVCCGNTE GEVKEQCRLE IKKEEHCKSG CCGEEIQTGE ITLVSEEETE STNCSTGCCV DKEEVTQTCH EKPASLVVSG
1101: LEVKKDEHCE SSHRAVKVET CCKVKIPEAC ASKCRDRAKR HSGKSCCRSY AKELCSHRHH HHHHHHHHHV SA

Arabidopsis Description

HMA4Putative cadmium/zinc-transporting ATPase HMA4 [Source:UniProtKB/Swiss-Prot;Acc:O64474]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.