CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plasma membrane 1
nucleus 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d005189_P001	Maize	plasma membrane	84.14	81.43
EER96099	Sorghum	cytosol	61.52	64.13
Zm00001d019226_P003	Maize	cytosol	54.56	57.0
CDY51647	Canola	golgi, plasma membrane, vacuole	20.36	54.91
VIT_11s0103g00370.t01	Wine grape	plasma membrane	42.12	54.74
GSMUA_Achr5P22660_001	Banana	plasma membrane	47.16	53.86
AT4G30120.1	Thale cress	cytosol	30.23	52.03
Bra024103.1-P	Field mustard	peroxisome, plasma membrane, vacuole	41.16	50.26
CDX68627	Canola	cytosol, plasma membrane, vacuole	40.19	49.47
CDY28160	Canola	cytosol	40.09	49.34
Bra011165.1-P	Field mustard	cytosol	39.87	49.08
CDY72630	Canola	golgi, plasma membrane, vacuole	18.01	48.28
KRH02816	Soybean	plasma membrane	38.69	48.26
CDY69827	Canola	plasma membrane	32.15	47.62
GSMUA_Achr5P21940_001	Banana	extracellular, plasma membrane	47.37	47.27
GSMUA_Achr8P24660_001	Banana	cytosol	47.05	46.65
EER90320	Sorghum	plasma membrane	52.41	45.74
CDY51646	Canola	cytosol, plasma membrane, vacuole	9.54	45.64
Bra011164.1-P	Field mustard	cytosol, plasma membrane	42.55	45.53
CDY69511	Canola	plasma membrane	34.83	45.39
CDY30170	Canola	cytosol, peroxisome, plasma membrane	42.55	45.37
CDY62400	Canola	plasma membrane	42.02	44.95
CDY51690	Canola	cytosol, plasma membrane, vacuole	8.15	44.44
CDX68625	Canola	plasma membrane	34.51	44.11
Bra024107.1-P	Field mustard	plasma membrane	40.19	42.47
KRH37273	Soybean	cytosol, plasma membrane, vacuole	40.19	42.37
AT4G30110.1	Thale cress	plasma membrane	42.77	41.96
CDY28206	Canola	plasma membrane	31.4	40.64
CDX68623	Canola	cytosol, endoplasmic reticulum, plasma membrane	22.19	37.91
KRH19069	Soybean	plasma membrane	44.37	37.77
CDY51090	Canola	cytosol	40.3	34.56
CDY36489	Canola	cytosol	41.16	33.42
AT2G19110.2	Thale cress	cytosol	41.8	33.28
Solyc07g009130.2.1	Tomato	plastid	45.12	32.33
Bra024449.1-P	Field mustard	cytosol	39.98	31.34
Bra038842.1-P	Field mustard	cytosol	40.73	29.9
OQU81022	Sorghum	cytosol	21.33	25.29
CDY08717	Canola	cytosol, nucleus, plasma membrane	41.37	24.76
KXG20697	Sorghum	plastid	20.15	22.71
KXG40056	Sorghum	plastid	21.22	22.0
EES06348	Sorghum	cytosol	23.47	21.97
KXG20553	Sorghum	plasma membrane	23.58	21.85
EES04697	Sorghum	cytosol, plastid	21.86	20.94
EES11247	Sorghum	mitochondrion	21.22	19.76
KXG26864	Sorghum	cytosol, plasma membrane, plastid	21.86	18.85
CDY51648	Canola	cytosol	0.75	10.29

Protein Annotations

Gene3D:2.70.150.20	MapMan:24.1.2.1.1	Gene3D:3.30.70.100	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	InterPro:ATPase_P-typ_P_site
InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	UniProt:C5XDI3	ncoils:Coil	EnsemblPlants:EER96100
ProteinID:EER96100	ProteinID:EER96100.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215
GO:GO:0005488	GO:GO:0005575	GO:GO:0006810	GO:GO:0006812	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0019829	GO:GO:0030001	GO:GO:0046872	GO:GO:0099132
InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:IPR006121	InterPro:IPR023214
InterPro:IPR023299	InterPro:P-typ_ATPase_IB	PFAM:PF00122	PFAM:PF00702	PRINTS:PR00119	ScanProsite:PS00154
ScanProsite:PS01229	PFscan:PS50846	PANTHER:PTHR43338	PANTHER:PTHR43338:SF2	InterPro:P_typ_ATPase	EnsemblPlantsGene:SORBI_3002G083100
SUPFAM:SSF55008	SUPFAM:SSF56784	SUPFAM:SSF81653	SUPFAM:SSF81665	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01525
TMHMM:TMhelix	UniParc:UPI0001A839CD	RefSeq:XP_002459579.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr2:+:8884421..8888126

Molecular Weight (calculated)

96267.6 Da

IEP (calculated)

7.802

GRAVY (calculated)

0.201

Length

933 amino acids

Sequence
(BLAST)

001: MPGPAVEAAA KGGGHHHHDG GHHHDGHGCG GGKAAAGSKW EKTYLDVLGI CCTAEVALVE RLLSPIHGVR AVTVVVPSRT VIVDHDTAVV SQFHIVKVLN
101: KAGLEASIRA YGSSAGASWR WPSPFIIACG VLLAASLFAP LLPPLQWLAV VAAVVGSQPM LLRAFAAAGK LTLDINILML IAVVGSVALG SYTEAGAIVF
201: LFTVAEWLET LACTKASAGM MSLMSTVPKT VVLAETGQVV GMGDVAVGTV VAVRAGDVVP VDGVVVDGHS EVDESSLTGE SFPVPKQPQS EVWAGTINLD
301: GYISVRTTAL AENSTVAKME RLVEDAQNSA SRTQRLIDSC AKHYTPAVVV IAATVVVVPA LLGSRDLEHW FRLSLVLLVS ACPCALVLST PVATFCALLR
401: AARMGLLIKG GNVLESLGEV SVAAFDKTGT ITRGEFSIKD FLVVGDKVEM NKLLYWVSSI ESKSSHPMAA ALVDYAQSKS IQARPDDVTE TCIYHGEGIY
501: GEINGKKIYI GNERIMARSS CHQHAAAHQE TDGLMKGVSM GLVICDGDLV GKFSLSDTCR TGAAEAILQL KSMGIKSVML TGDSAAAAKH AQEQLGGVLE
601: ELHAGLLPED KVRLIRELQT RHGATMMVGD GMNDAPALAA ADVGISMGLS GSAAAIETSH ATLMSGDILR VPKAVRLGRR TRRTIALNVA SSVATKAAVM
701: ALAVAWRPVL WVAVLADVGT CLLVVLHSML LLRDAGRARR RCGGGASKGG CCGTPHKAPK ACSSTAACKS PKSCCSTPTK SPKACCGTMK PVATRPQHAE
801: TAGGDHSHKH GKDGHHHCSH NLSKLPEDAV VIAIPGPGRA VEHRKDAAGH EKADGHGGAG GCCGGHGASP TAAHGASGCC ASGHGEEEVC IVISGRSPCC
901: STARSRSGSP KDAICCHGSG GKDGGGAISA LVC

Best Arabidopsis Sequence Match ( AT4G30110.2 )
(BLAST)

001: MASKKMTKSY FDVLGICCTS EVPLIENILN SMDGVKEFSV IVPSRTVIVV HDTLILSQFQ IVKALNQAQL EANVRVTGET NFKNKWPSPF AVVSGILLLL
101: SFFKYLYSPF RWLAVAAVVA GIYPILAKAV ASLARFRIDI NILVVVTVGA TIGMQDYTEA AVVVFLFTIA EWLQSRASYK ASAVMQSLMS LAPQKAVIAE
201: TGEEVEVDEL KTNTVIAVKA GETIPIDGVV VDGNCEVDEK TLTGEAFPVP KLKDSTVWAG TINLNGYITV NTTALAEDCV VAKMAKLVEE AQNSKTETQR
301: FIDKCSKYYT PAIILISICF VAIPFALKVH NLKHWVHLAL VVLVSACPCG LILSTPVATF CALTKAATSG LLIKGADYLE TLAKIKIVAF DKTGTITRGE
401: FIVMDFQSLS EDISLQSLLY WVSSTESKSS HPMAAAVVDY ARSVSVEPKP EAVEDYQNFP GEGIYGKIDG KEVYIGNKRI ASRAGCLSVP DIDVDTKGGK
501: TIGYVYVGET LAGVFNLSDA CRSGVAQAMK ELKSLGIKIA MLTGDNHAAA MHAQEQLGNA MDIVRAELLP EDKSEIIKQL KREEGPTAMV GDGLNDAPAL
601: ATADIGISMG VSGSALATET GNIILMSNDI RRIPQAIKLA KRAKRKVVEN VVISITMKGA ILALAFAGHP LIWAAVLADV GTCLLVILNS MLLLSDKHKT
701: GNKCYRESSS SSVLIAEKLE GDAAGDMEAG LLPKISDKHC KPGCCGTKTQ EKAMKPAKAS SDHSHSGCCE TKQKDNVTVV KKSCCAEPVD LGHGHDSGCC
801: GDKSQQPHQH EVQVQQSCHN KPSGLDSGCC GGKSQQPHQH ELQQSCHDKP SGLDIGTGPK HEGSSTLVNL EGDAKEELKV LVNGFCSSPA DLAITSLKVK
901: SDSHCKSNCS SRERCHHGSN CCRSYAKESC SHDHHHTRAH GVGTLKEIVI E

Arabidopsis Description

HMA2Cadmium/zinc-transporting ATPase HMA2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZW4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.