Factsheet for GSMUA_Achr8P24660_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P22660_001	Banana	plasma membrane	66.63	76.74
GSMUA_Achr5P21940_001	Banana	extracellular, plasma membrane	63.66	64.06
TraesCS7B01G320900.1	Wheat	plasma membrane	51.75	63.58
VIT_11s0103g00370.t01	Wine grape	plasma membrane	46.97	61.56
HORVU5Hr1G094430.8	Barley	endoplasmic reticulum, plasma membrane	47.08	57.91
CDY51647	Canola	golgi, plasma membrane, vacuole	21.15	57.51
AT4G30120.1	Thale cress	cytosol	32.41	56.27
TraesCS5A01G383400.1	Wheat	plasma membrane	48.03	55.39
TraesCS5B01G388000.1	Wheat	plasma membrane	48.78	55.37
TraesCS7D01G412800.1	Wheat	plasma membrane	55.58	55.34
TraesCS7A01G420000.1	Wheat	plasma membrane	55.15	55.27
Bra024103.1-P	Field mustard	peroxisome, plasma membrane, vacuole	44.1	54.32
KRH02816	Soybean	plasma membrane	42.83	53.88
HORVU7Hr1G097210.4	Barley	plasma membrane	53.99	53.7
CDY28160	Canola	cytosol	43.25	53.69
CDX68627	Canola	cytosol, plasma membrane, vacuole	43.15	53.56
Bra011165.1-P	Field mustard	cytosol	43.04	53.43
TraesCS5D01G392700.1	Wheat	plasma membrane	48.25	53.22
CDY72630	Canola	golgi, plasma membrane, vacuole	19.55	52.87
TraesCS7D01G412400.1	Wheat	plasma membrane	55.79	52.34
HORVU7Hr1G097240.1	Barley	plasma membrane	56.0	52.23
CDY69827	Canola	plasma membrane	34.86	52.06
Bra011164.1-P	Field mustard	cytosol, plasma membrane	48.03	51.83
CDY51646	Canola	cytosol, plasma membrane, vacuole	10.73	51.79
TraesCS7A01G419500.1	Wheat	plasma membrane	54.2	51.78
Os06t0700700-02	Rice	plasma membrane	58.66	51.73
CDY51690	Canola	cytosol, plasma membrane, vacuole	9.35	51.46
TraesCS7B01G320100.2	Wheat	plasma membrane	55.79	51.32
CDY30170	Canola	cytosol, peroxisome, plasma membrane	47.72	51.31
CDY62400	Canola	plasma membrane	47.29	51.03
CDY69511	Canola	plasma membrane	38.58	50.7
EER90320	Sorghum	plasma membrane	56.54	49.77
EER96099	Sorghum	cytosol	47.08	49.5
CDX68625	Canola	plasma membrane	38.04	49.04
Bra024107.1-P	Field mustard	plasma membrane	46.01	49.04
Zm00001d005190_P001	Maize	plastid	46.76	49.0
AT4G30110.1	Thale cress	plasma membrane	48.46	47.95
Zm00001d014669_P007	Maize	plasma membrane	55.58	47.59
EER96100	Sorghum	cytosol	46.65	47.05
KRH37273	Soybean	cytosol, plasma membrane, vacuole	43.78	46.55
Zm00001d005189_P001	Maize	plasma membrane	46.97	45.85
CDY28206	Canola	plasma membrane	34.96	45.63
Os07t0232900-01	Rice	cytosol, nucleus, plasma membrane	48.14	45.12
GSMUA_Achr4P30180_001	Banana	plasma membrane	36.24	44.63
KRH19069	Soybean	plasma membrane	51.22	43.98
CDX68623	Canola	cytosol, endoplasmic reticulum, plasma membrane	25.29	43.59
CDY51090	Canola	cytosol	45.8	39.61
CDY36489	Canola	cytosol	48.35	39.6
AT2G19110.2	Thale cress	cytosol	46.87	37.63
Bra024449.1-P	Field mustard	cytosol	46.65	36.89
Zm00001d019226_P003	Maize	cytosol	33.58	35.39
Solyc07g009130.2.1	Tomato	plastid	48.25	34.87
Bra038842.1-P	Field mustard	cytosol	46.33	34.3
CDY08717	Canola	cytosol, nucleus, plasma membrane	48.03	28.99
GSMUA_Achr5P12290_001	Banana	plasma membrane	16.47	27.68
GSMUA_Achr8P30620_001	Banana	cytosol	20.4	23.88
GSMUA_Achr7P12640_001	Banana	cytosol	20.51	23.11
GSMUA_Achr8P06970_001	Banana	cytosol	22.1	22.03
GSMUA_Achr3P11880_001	Banana	cytosol	20.83	21.66
GSMUA_Achr5P26800_001	Banana	cytosol	21.25	21.37
GSMUA_Achr5P12300_001	Banana	cytosol	17.32	20.45
GSMUA_Achr9P16140_001	Banana	plastid	18.17	19.86
GSMUA_Achr1P00300_001	Banana	cytosol	17.85	19.11
CDY51648	Canola	cytosol	0.96	13.24

Protein Annotations

Gene3D:2.70.150.20	MapMan:24.1.2.1.1	Gene3D:3.30.70.100	InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_transduc_dom_A_sf
ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488
GO:GO:0005575	GO:GO:0006810	GO:GO:0006812	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0019829	GO:GO:0030001	GO:GO:0046872	GO:GO:0099132	EnsemblPlantsGene:GSMUA_Achr8G24660_001
EnsemblPlants:GSMUA_Achr8P24660_001	EnsemblPlants:GSMUA_Achr8T24660_001	InterPro:HAD-like_sf	InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:IPR006121
UniProt:M0TTB9	InterPro:P-typ_ATPase_IB	PFAM:PF00122	PFAM:PF00702	PRINTS:PR00119	ScanProsite:PS00154
PFscan:PS50846	PANTHER:PTHR43338	PANTHER:PTHR43338:SF2	InterPro:P_typ_ATPase	SUPFAM:SSF55008	SUPFAM:SSF56784
SUPFAM:SSF81653	SUPFAM:SSF81665	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01525	TMHMM:TMhelix	UniParc:UPI0002953C9C
SEG:seg	:	:	:	:	:

Description

Putative cadmium/zinc-transporting ATPase 3 [Source:GMGC_GENE;Acc:GSMUA_Achr8G24660_001]

Coordinates

chr8:-:28771043..28777249

Molecular Weight (calculated)

103095.0 Da

IEP (calculated)

7.877

GRAVY (calculated)

0.000

Length

941 amino acids

Sequence
(BLAST)

001: MGEPSKDRIG KVPKHQKSYF DVLGLCCSSE VPLIEKILKP LSGVQKVSVI VPSKTVIVVH DSLLISQHEI LKALNQARLE ATVRAYGSAE ITKKWPSPYI
101: LACGVLLVVS LFKRFFHPLR WFAIAAVLVG INPIILRGIA AIRRLTLDIN ILLLIAVGGA VALRDYSEAA FVVFLFTIAE WLESRASHKA TVGMSSLMSM
201: APQKAVLAET GQVVDIEDVE INTIIEVKAG EVIPIDGIVV DGQSEVDERS LTGESLPVTK QVNSLVWAGT LNIDGYISLR TTALSENSAV AKMKRLVEEA
301: QNRRSNTQRL IDSCTKYYTP GQCIYCISVS NIRWLNVVRD AMTKTYCNYH IAWINHQRYS FSSSPLALVL LVSACPCALV LSTPVATFCA LLKAARIGLL
401: IKGGDVLEAL AKIRVVAFDK TGTITKGEFK VVEFQSISSK VSLEMLLYCD TIEIKGSFDK LVMHFMFTVN LSDVFSRLFR VSSIESKSSH PMAAALVEHA
501: RSHSIEPKPD CVKEFHIYPG EGIYGEVDGR DIHIGNKRIA ARVLCETVPN MEDMKEGVTY GYVFLDMVPV GTYALSDTCR IGAAEAIKEL KSLGIKTAML
601: TGDSMEASLH AQRQLNHVME EVHAELLPED KVQLIGKLKS REGSTAMVGD GMNDAPALAM ADVGISMGVS GSAVAMETSH ITLMSNDICK IPRAIRLARK
701: TRRMIIMNII FSGVTKIAIL AIAFAGRPLL WAAVLADVGT CLLVILNSMT LLQTKTSPKK KCCGSSHKAH MEKPKHAEHC GCQDNHGCHD HRKAMDERRH
801: SHCMNHDHPE ESPAHARCCQ ELATKPTNSS QEHSITITDA RHDSGDLQKQ QDGPDSNMTC ENQTLKCSSN NCNDKEKKRI EECCMGNRND CGMQKGCSSS
901: QGLIVERREL GGCCRTYTKA CGSKDSCCAS GRVQLPEIIT E

Best Arabidopsis Sequence Match ( AT4G30110.2 )
(BLAST)

001: MASKKMTKSY FDVLGICCTS EVPLIENILN SMDGVKEFSV IVPSRTVIVV HDTLILSQFQ IVKALNQAQL EANVRVTGET NFKNKWPSPF AVVSGILLLL
101: SFFKYLYSPF RWLAVAAVVA GIYPILAKAV ASLARFRIDI NILVVVTVGA TIGMQDYTEA AVVVFLFTIA EWLQSRASYK ASAVMQSLMS LAPQKAVIAE
201: TGEEVEVDEL KTNTVIAVKA GETIPIDGVV VDGNCEVDEK TLTGEAFPVP KLKDSTVWAG TINLNGYITV NTTALAEDCV VAKMAKLVEE AQNSKTETQR
301: FIDKCSKYYT PAIILISICF VAIPFALKVH NLKHWVHLAL VVLVSACPCG LILSTPVATF CALTKAATSG LLIKGADYLE TLAKIKIVAF DKTGTITRGE
401: FIVMDFQSLS EDISLQSLLY WVSSTESKSS HPMAAAVVDY ARSVSVEPKP EAVEDYQNFP GEGIYGKIDG KEVYIGNKRI ASRAGCLSVP DIDVDTKGGK
501: TIGYVYVGET LAGVFNLSDA CRSGVAQAMK ELKSLGIKIA MLTGDNHAAA MHAQEQLGNA MDIVRAELLP EDKSEIIKQL KREEGPTAMV GDGLNDAPAL
601: ATADIGISMG VSGSALATET GNIILMSNDI RRIPQAIKLA KRAKRKVVEN VVISITMKGA ILALAFAGHP LIWAAVLADV GTCLLVILNS MLLLSDKHKT
701: GNKCYRESSS SSVLIAEKLE GDAAGDMEAG LLPKISDKHC KPGCCGTKTQ EKAMKPAKAS SDHSHSGCCE TKQKDNVTVV KKSCCAEPVD LGHGHDSGCC
801: GDKSQQPHQH EVQVQQSCHN KPSGLDSGCC GGKSQQPHQH ELQQSCHDKP SGLDIGTGPK HEGSSTLVNL EGDAKEELKV LVNGFCSSPA DLAITSLKVK
901: SDSHCKSNCS SRERCHHGSN CCRSYAKESC SHDHHHTRAH GVGTLKEIVI E

Arabidopsis Description

HMA2Cadmium/zinc-transporting ATPase HMA2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZW4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.