Factsheet for GSMUA_Achr9P16140_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 1
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY67922	Canola	cytosol	20.09	72.69
TraesCS7B01G337700.1	Wheat	extracellular, plasma membrane	33.68	72.14
Os06t0690700-01	Rice	plastid	68.76	72.02
HORVU5Hr1G066370.30	Barley	golgi, mitochondrion, peroxisome	57.38	71.59
KXG20697	Sorghum	plastid	68.06	70.77
TraesCS7A01G439100.1	Wheat	plastid	68.06	70.77
Zm00001d014569_P002	Maize	plastid	67.36	70.47
TraesCS7D01G428700.1	Wheat	plastid	67.6	70.46
CDY67923	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	13.47	69.46
VIT_07s0129g01040.t01	Wine grape	plastid	64.23	66.71
HORVU7Hr1G100160.2	Barley	plastid	67.48	66.7
Bra039194.1-P	Field mustard	plastid	57.38	63.82
KRH04519	Soybean	plastid	60.39	63.65
AT4G37270.1	Thale cress	plasma membrane, plastid	60.39	63.49
CDX75636	Canola	mitochondrion	60.16	63.4
KRH57989	Soybean	plasma membrane, plastid	60.98	63.1
Bra011750.1-P	Field mustard	plastid	59.93	63.08
Solyc02g092920.2.1	Tomato	plastid	60.05	62.97
CDX69288	Canola	plastid	59.81	62.88
CDY46080	Canola	plastid	49.25	62.81
PGSC0003DMT400064232	Potato	plastid	59.47	62.67
GSMUA_Achr5P12290_001	Banana	plasma membrane	16.96	26.07
GSMUA_Achr4P30180_001	Banana	plasma membrane	20.21	22.77
GSMUA_Achr5P22660_001	Banana	plasma membrane	20.21	21.3
GSMUA_Achr8P30620_001	Banana	cytosol	19.51	20.9
GSMUA_Achr7P12640_001	Banana	cytosol	20.09	20.72
GSMUA_Achr3P11880_001	Banana	cytosol	20.33	19.34
GSMUA_Achr5P12300_001	Banana	cytosol	17.19	18.57
GSMUA_Achr8P06970_001	Banana	cytosol	19.98	18.22
GSMUA_Achr8P24660_001	Banana	cytosol	19.86	18.17
GSMUA_Achr5P21940_001	Banana	extracellular, plasma membrane	19.4	17.86
GSMUA_Achr5P26800_001	Banana	cytosol	19.16	17.63
GSMUA_Achr1P00300_001	Banana	cytosol	17.54	17.18

Protein Annotations

Gene3D:2.70.150.20	MapMan:24.1.2.1.1	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf
InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810
GO:GO:0006812	GO:GO:0006878	GO:GO:0008150	GO:GO:0009507	GO:GO:0009536	GO:GO:0009628
GO:GO:0009642	GO:GO:0009941	GO:GO:0009987	GO:GO:0015633	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0016887	GO:GO:0019725	GO:GO:0019829	GO:GO:0055069	GO:GO:0071577
GO:GO:0099132	EnsemblPlantsGene:GSMUA_Achr9G16140_001	EnsemblPlants:GSMUA_Achr9P16140_001	EnsemblPlants:GSMUA_Achr9T16140_001	InterPro:HAD-like_sf	InterPro:HAD_sf
InterPro:IPR023214	InterPro:IPR023299	UniProt:M0U0S1	InterPro:P-typ_ATPase_IB	PFAM:PF00122	PFAM:PF00702
PRINTS:PR00119	ScanProsite:PS00154	PANTHER:PTHR43079	InterPro:P_typ_ATPase	SUPFAM:SSF56784	SUPFAM:SSF81653
SUPFAM:SSF81665	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01525	TMHMM:TMhelix	UniParc:UPI0002957BC5	SEG:seg

Description

Probable cadmium/zinc-transporting ATPase HMA1, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr9G16140_001]

Coordinates

chr9:-:10836671..10872481

Molecular Weight (calculated)

92988.6 Da

IEP (calculated)

8.087

GRAVY (calculated)

0.075

Length

861 amino acids

Sequence
(BLAST)

001: MESLAFAARS RNSPAALDQF PICKRTTRAR ATQQRRSSSS PFNYRTPTLV HRYRRPNSFA HSSSLIFSKS PLLYPPSGPR ILRPLCCSAH GNADHGVRSH
101: SYHSHHGHSH SHDHDHHHHH GHGHSHGHGE DGLPNEAQKA VLRFAKAVGW ADLADLLREH LQLCCCSMVS LLLAAACHCL LPGRAGKPLQ NALIAVAFPL
201: VGVSAALDAI VIIASGKVNI HVLMALAAFA SVFMGNSLEG GLLLAMFNLA HIAEEYFTSQ SMIDVKELKD NFPDYALLLD VNGDEPPQFS KLDYAKVPVC
301: DLEVGSYILV RAGEAVPVDG EVFQGASTIT IEHLTGETKP LERGVGDAIP GGARNLEGMM VVKVTKSWED STLNKIVELT KEGQLNKPKL ERWLDEFGEY
401: YSKVVVALSL GVALLGPFIF KWPFIGNSVS RGSVYRALGF MVAASPCALA VAPLAYATAI SACARKGILL KGGHVFDALA ACKSIAFDKT GTLTTGKLMC
501: KAIEPIHGHW FGESKSDVSL CCMPNCESEA LAVAAAMEKG TTHPIGRALV DHSLGKDLPD IFIKSFECLP GRGLFATLTG IKSGTWQDDI SKASLGSVEY
601: IASLCKSMDE SEKIKEAART SAHGSDFVQA ALSINKKVTL FHFEDEPRPG VVEVISTLKD KARLRIMMLT GDHELSAMRI AKIVGIDEVY CCLKPEEKLN
701: RVKTTSRDRG GGLIMVGDGI NDAPALAAAT VGIVLAQRAS ATATAVADVL LLQDNITGVP FCIAKARQTT SLVKQSVALA LSCIVFASLP SVFGYLPLWL
801: TVLLHEGGTL LVCLNSVRAL NNPTWSWKED LRQALYQLKK VLVDLTKWRP SWNSTIQPSA L

Best Arabidopsis Sequence Match ( AT4G37270.1 )
(BLAST)

001: MEPATLTRSS SLTRFPYRRG LSTLRLARVN SFSILPPKTL LRQKPLRISA SLNLPPRSIR LRAVEDHHHD HHHDDEQDHH NHHHHHHQHG CCSVELKAES
101: KPQKMLFGFA KAIGWVRLAN YLREHLHLCC SAAAMFLAAA VCPYLAPEPY IKSLQNAFMI VGFPLVGVSA SLDALMDIAG GKVNIHVLMA LAAFASVFMG
201: NALEGGLLLA MFNLAHIAEE FFTSRSMVDV KELKESNPDS ALLIEVHNGN VPNISDLSYK SVPVHSVEVG SYVLVGTGEI VPVDCEVYQG SATITIEHLT
301: GEVKPLEAKA GDRVPGGARN LDGRMIVKAT KAWNDSTLNK IVQLTEEAHS NKPKLQRWLD EFGENYSKVV VVLSLAIAFL GPFLFKWPFL STAACRGSVY
401: RALGLMVAAS PCALAVAPLA YATAISSCAR KGILLKGAQV LDALASCHTI AFDKTGTLTT GGLTCKAIEP IYGHQGGTNS SVITCCIPNC EKEALAVAAA
501: MEKGTTHPIG RAVVDHSVGK DLPSIFVESF EYFPGRGLTA TVNGVKTVAE ESRLRKASLG SIEFITSLFK SEDESKQIKD AVNASSYGKD FVHAALSVDQ
601: KVTLIHLEDQ PRPGVSGVIA ELKSWARLRV MMLTGDHDSS AWRVANAVGI TEVYCNLKPE DKLNHVKNIA REAGGGLIMV GEGINDAPAL AAATVGIVLA
701: QRASATAIAV ADILLLRDNI TGVPFCVAKS RQTTSLVKQN VALALTSIFL AALPSVLGFV PLWLTVLLHE GGTLLVCLNS VRGLNDPSWS WKQDIVHLIN
801: KLRSQEPTSS SSNSLSSAH

Arabidopsis Description

HMA1Probable cadmium/zinc-transporting ATPase HMA1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M3H5]
SUBAcon: [plasma membrane,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.