Factsheet for Bra011750.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 4
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX75636	Canola	mitochondrion	99.39	99.51
CDX69288	Canola	plastid	98.17	98.05
AT4G37270.1	Thale cress	plasma membrane, plastid	93.28	93.16
Bra039194.1-P	Field mustard	plastid	77.51	81.91
KRH04519	Soybean	plastid	70.29	70.38
KRH57989	Soybean	plasma membrane, plastid	71.39	70.19
VIT_07s0129g01040.t01	Wine grape	plastid	68.83	67.91
TraesCS7B01G337700.1	Wheat	extracellular, plasma membrane	32.76	66.67
PGSC0003DMT400064232	Potato	plastid	65.16	65.24
Solyc02g092920.2.1	Tomato	plastid	65.16	64.92
HORVU5Hr1G066370.30	Barley	golgi, mitochondrion, peroxisome	53.91	63.91
Os06t0690700-01	Rice	plastid	63.57	63.26
Zm00001d014569_P002	Maize	plastid	62.96	62.58
KXG20697	Sorghum	plastid	63.2	62.44
TraesCS7D01G428700.1	Wheat	plastid	62.71	62.11
TraesCS7A01G439100.1	Wheat	plastid	62.71	61.96
GSMUA_Achr9P16140_001	Banana	plastid	63.08	59.93
HORVU7Hr1G100160.2	Barley	plastid	62.22	58.44
Bra011165.1-P	Field mustard	cytosol	20.78	22.43
Bra024103.1-P	Field mustard	peroxisome, plasma membrane, vacuole	20.78	22.25
Bra011164.1-P	Field mustard	cytosol, plasma membrane	21.39	20.07
Bra002374.1-P	Field mustard	plastid	21.52	19.89
Bra011450.1-P	Field mustard	plastid	22.25	19.36
Bra003110.1-P	Field mustard	cytosol	22.62	18.94
Bra024107.1-P	Field mustard	plasma membrane	20.17	18.69
Bra027573.1-P	Field mustard	cytosol	21.88	17.86
Bra025102.1-P	Field mustard	cytosol	21.15	17.35
Bra027641.1-P	Field mustard	mitochondrion	22.49	15.44
Bra024449.1-P	Field mustard	cytosol	20.42	14.03
Bra038842.1-P	Field mustard	cytosol	20.9	13.45

Protein Annotations

Gene3D:2.70.150.20	MapMan:24.1.2.1.1	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf
InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	EnsemblPlantsGene:Bra011750	EnsemblPlants:Bra011750.1	EnsemblPlants:Bra011750.1-P	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006812	GO:GO:0006878	GO:GO:0008150
GO:GO:0009507	GO:GO:0009536	GO:GO:0009628	GO:GO:0009642	GO:GO:0009941	GO:GO:0009987
GO:GO:0015633	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0019725
GO:GO:0019829	GO:GO:0055069	GO:GO:0071577	GO:GO:0099132	InterPro:HAD-like_sf	InterPro:HAD_sf
InterPro:IPR023214	InterPro:IPR023299	UniProt:M4D5J3	InterPro:P-typ_ATPase_IB	PFAM:PF00122	PFAM:PF00702
PRINTS:PR00119	ScanProsite:PS00154	PANTHER:PTHR43079	InterPro:P_typ_ATPase	SUPFAM:SSF56784	SUPFAM:SSF81653
SUPFAM:SSF81665	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01525	TMHMM:TMhelix	UniParc:UPI000254660C	SEG:seg

Description

AT4G37270 (E=0.0) HMA1, ATHMA1 | HMA1; ATPase/ cadmium-transporting ATPase/ calcium-transporting ATPase/ copper-exporting ATPase/ zinc transporting ATPase

Coordinates

chrA01:+:735098..739067

Molecular Weight (calculated)

87722.0 Da

IEP (calculated)

7.760

GRAVY (calculated)

0.144

Length

818 amino acids

Sequence
(BLAST)

001: MEPAALTRSS SLTRFPYRRG LATLRLARVN SFSILPPKTP PLPLRISASL SLPRQSIRLR AVEDHHHDHH HHDGEQEQHH HPHHHHGCCS VELKAESKPQ
101: KALFGFAKAI GWVRLANFLR EHLHLCCSSA ALFVAAAACP YFAPKPYVKS LQHAFMIVGF PLVGVSASLD ALMDIAGGKV NIHVLMALAA FASVFMGNAL
201: EGGLLLAMFN LAHIAEEFFT SRSMVDVKEL KESNPDSALL IEVKNGNVPN ISDLSYKSVP VHSVEVGSYI LVGTGEIVPV DCEVYQGSAT ITIEHLTGEV
301: KPLEAKAGDR VPGGARNLDG RMIVKATKAW NESTLNRIVQ LTEEAHSNKP KLQRWLDEFG ENYSKVVVVL SLAIAFLGPF LFKWPFLSTT ACRGSVYRAL
401: GLMVAASPCA LAVAPLAYAT AISSCAKKGI LLKGAQVLDA LASCHTVAFD KTGTLTTGGL TCKAIEPIYG HHGGNNPSVI TCCVPNCEKE ALAVAAAMEK
501: GTTHPIGRAV VDHSVGKDLP SIFVESFEYF PGRGLTATVN GVESVAEASR LRKASLGSIE FITSLFKSED ESQQIKDAVN ASLYGKDFVH AALSVDHKVT
601: LIHLEDQPRP GVSGVIAELK NWAQLRVMML TGDHDSSAWR VANAVGISEV YCNLKPEDKL NHVKNIARDA GGGLIMVGEG INDAPALAAA TVGIVLAQRA
701: SATAIAVADI LLLRDNITGV PFCVAKSRQT TSLVKQNVAL ALTSIFLAAL PSVLGFLPLW LTVLLHEGGT LLVCLNSVRG LNDPSWSWKQ DIAHLVNKLS
801: SRESTSSNNS LSSVETAH

Best Arabidopsis Sequence Match ( AT4G37270.1 )
(BLAST)

001: MEPATLTRSS SLTRFPYRRG LSTLRLARVN SFSILPPKTL LRQKPLRISA SLNLPPRSIR LRAVEDHHHD HHHDDEQDHH NHHHHHHQHG CCSVELKAES
101: KPQKMLFGFA KAIGWVRLAN YLREHLHLCC SAAAMFLAAA VCPYLAPEPY IKSLQNAFMI VGFPLVGVSA SLDALMDIAG GKVNIHVLMA LAAFASVFMG
201: NALEGGLLLA MFNLAHIAEE FFTSRSMVDV KELKESNPDS ALLIEVHNGN VPNISDLSYK SVPVHSVEVG SYVLVGTGEI VPVDCEVYQG SATITIEHLT
301: GEVKPLEAKA GDRVPGGARN LDGRMIVKAT KAWNDSTLNK IVQLTEEAHS NKPKLQRWLD EFGENYSKVV VVLSLAIAFL GPFLFKWPFL STAACRGSVY
401: RALGLMVAAS PCALAVAPLA YATAISSCAR KGILLKGAQV LDALASCHTI AFDKTGTLTT GGLTCKAIEP IYGHQGGTNS SVITCCIPNC EKEALAVAAA
501: MEKGTTHPIG RAVVDHSVGK DLPSIFVESF EYFPGRGLTA TVNGVKTVAE ESRLRKASLG SIEFITSLFK SEDESKQIKD AVNASSYGKD FVHAALSVDQ
601: KVTLIHLEDQ PRPGVSGVIA ELKSWARLRV MMLTGDHDSS AWRVANAVGI TEVYCNLKPE DKLNHVKNIA REAGGGLIMV GEGINDAPAL AAATVGIVLA
701: QRASATAIAV ADILLLRDNI TGVPFCVAKS RQTTSLVKQN VALALTSIFL AALPSVLGFV PLWLTVLLHE GGTLLVCLNS VRGLNDPSWS WKQDIVHLIN
801: KLRSQEPTSS SSNSLSSAH

Arabidopsis Description

HMA1Probable cadmium/zinc-transporting ATPase HMA1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M3H5]
SUBAcon: [plasma membrane,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.