CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH57989	Soybean	plasma membrane, plastid	95.72	93.99
CDY67923	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	15.91	77.84
CDY67922	Canola	cytosol	22.28	76.47
Bra039194.1-P	Field mustard	plastid	67.44	71.19
VIT_07s0129g01040.t01	Wine grape	plastid	72.09	71.05
CDX75636	Canola	mitochondrion	70.75	70.75
CDX69288	Canola	plastid	70.75	70.57
Bra011750.1-P	Field mustard	plastid	70.38	70.29
CDY46080	Canola	plastid	57.41	69.48
AT4G37270.1	Thale cress	plasma membrane, plastid	69.28	69.11
TraesCS7B01G337700.1	Wheat	extracellular, plasma membrane	32.8	66.67
PGSC0003DMT400064232	Potato	plastid	66.22	66.22
Solyc02g092920.2.1	Tomato	plastid	65.97	65.65
HORVU5Hr1G066370.30	Barley	golgi, mitochondrion, peroxisome	54.47	64.49
Os06t0690700-01	Rice	plastid	63.04	62.65
TraesCS7D01G428700.1	Wheat	plastid	63.28	62.59
TraesCS7A01G439100.1	Wheat	plastid	63.28	62.44
Zm00001d014569_P002	Maize	plastid	62.18	61.73
KXG20697	Sorghum	plastid	62.42	61.59
GSMUA_Achr9P16140_001	Banana	plastid	63.65	60.39
HORVU7Hr1G100160.2	Barley	plastid	62.67	58.78
KRH59857	Soybean	cytosol	8.32	27.76
KRH41158	Soybean	plasma membrane	20.56	24.78
KRH58274	Soybean	plasma membrane	21.66	24.02
KRH61581	Soybean	plastid	13.59	21.98
KRH02816	Soybean	plasma membrane	19.58	21.39
KRH37273	Soybean	cytosol, plasma membrane, vacuole	22.15	20.45
KRH52252	Soybean	plastid	21.91	19.82
KRH42155	Soybean	plastid	22.03	19.21
KRH37212	Soybean	cytosol	22.64	18.76
KRH07428	Soybean	cytosol	20.93	18.73
KRH66147	Soybean	cytosol	21.79	18.66
KRG95266	Soybean	cytosol	22.4	18.6
KRH42397	Soybean	cytosol	22.03	18.11
KRH12191	Soybean	cytosol	21.91	17.97
KRH77529	Soybean	cytosol	21.42	17.91
KRH58516	Soybean	cytosol	21.66	17.81
KRH27938	Soybean	plasma membrane	6.12	17.61
KRH77528	Soybean	mitochondrion	18.36	17.34
KRH19069	Soybean	plasma membrane	20.56	15.33

Protein Annotations

EntrezGene:100776309	Gene3D:2.70.150.20	MapMan:24.1.2.1.1	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	EMBL:ACUP02010436
InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	EnsemblPlantsGene:GLYMA_17G166800	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005575	GO:GO:0006810
GO:GO:0006812	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0019829
GO:GO:0099132	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	InterPro:IPR023299	UniProt:K7MM17
EnsemblPlants:KRH04519	ProteinID:KRH04519	ProteinID:KRH04519.1	InterPro:P-typ_ATPase_IB	PFAM:PF00122	PFAM:PF00702
PRINTS:PR00119	ScanProsite:PS00154	PANTHER:PTHR43079	InterPro:P_typ_ATPase	SUPFAM:SSF56784	SUPFAM:SSF81653
SUPFAM:SSF81665	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01525	TMHMM:TMhelix	UniParc:UPI000233DF82	SEG:seg

Description

hypothetical protein

Coordinates

chr17:+:15237321..15251730

Molecular Weight (calculated)

88551.2 Da

IEP (calculated)

7.245

GRAVY (calculated)

0.127

Length

817 amino acids

Sequence
(BLAST)

001: MEAIPYSIPS TKLHSSLHIY TGVTRIRSLP LRPPPISIKP LYSPNFLILH RHRLRCVAES SNNHHHHDHD HHHGHHHHHH HHHHSHGANL TGPQKAVIAF
101: AKATRWMDLA DILREHLHLC CFSTALFVAA AICPHTLPKP LVKPLQNSLI FVAFPLVGVS ASLDALIEIS SGKVNIHVLM AMAAFASIFM GNSLEGGLLL
201: AMFNLAHIAE EYFTSRSMVD VRELKENNPD FALVLDTNDD DKLPNTFDLA YKRVPVHDVT VGSFILVGTG ESVPVDCEVF QGSATITIEH LTGEVKPLEA
301: KVGDRIPGGS RNLDGRIIVE VMKTWKESTL SRIVQLTEEA QSNKPKLERW LDEFGERYSQ VVVVLSIAIA VIGPFLFKWP FVSTSACRGS IYRALGLMVA
401: ASPCALAVAP LAYAIAISSC ARKGILLKGG HVLDALASCH TIAFDKTGTL TTGGLVFKAI EPIYGHHVRN NESNVPSCCI PTCEKEALAV ASAMEKGTTH
501: PIGRAVVDHS EGKDLPSVSV ESFEYFPGRG LTATVNSIES GTGGAKLLKA SLGSIDFITS LCQSEDESEK IKEAVNTSSY GSEYVHAALS VNQKVTLIHL
601: EDRPRPGVVN VIQELQDEAK LRVMMLTGDH ESSARRVASG VGINEFHCNL KPEDKLSHVK DISRDMGGGL IMVGEGINDA PALAAATVGI VLAHRASATA
701: IAVADVLLLR ESISAVPFCI AKSRQTTSLI KQNVALALTS ILMASLPSVL GFLPLWLTVL LHEGGTLLVC LNSVRALNEP SWSWKHDIFH LISEIKSRLL
801: SLKTNITGSN SIITTNL

Best Arabidopsis Sequence Match ( AT4G37270.1 )
(BLAST)

001: MEPATLTRSS SLTRFPYRRG LSTLRLARVN SFSILPPKTL LRQKPLRISA SLNLPPRSIR LRAVEDHHHD HHHDDEQDHH NHHHHHHQHG CCSVELKAES
101: KPQKMLFGFA KAIGWVRLAN YLREHLHLCC SAAAMFLAAA VCPYLAPEPY IKSLQNAFMI VGFPLVGVSA SLDALMDIAG GKVNIHVLMA LAAFASVFMG
201: NALEGGLLLA MFNLAHIAEE FFTSRSMVDV KELKESNPDS ALLIEVHNGN VPNISDLSYK SVPVHSVEVG SYVLVGTGEI VPVDCEVYQG SATITIEHLT
301: GEVKPLEAKA GDRVPGGARN LDGRMIVKAT KAWNDSTLNK IVQLTEEAHS NKPKLQRWLD EFGENYSKVV VVLSLAIAFL GPFLFKWPFL STAACRGSVY
401: RALGLMVAAS PCALAVAPLA YATAISSCAR KGILLKGAQV LDALASCHTI AFDKTGTLTT GGLTCKAIEP IYGHQGGTNS SVITCCIPNC EKEALAVAAA
501: MEKGTTHPIG RAVVDHSVGK DLPSIFVESF EYFPGRGLTA TVNGVKTVAE ESRLRKASLG SIEFITSLFK SEDESKQIKD AVNASSYGKD FVHAALSVDQ
601: KVTLIHLEDQ PRPGVSGVIA ELKSWARLRV MMLTGDHDSS AWRVANAVGI TEVYCNLKPE DKLNHVKNIA REAGGGLIMV GEGINDAPAL AAATVGIVLA
701: QRASATAIAV ADILLLRDNI TGVPFCVAKS RQTTSLVKQN VALALTSIFL AALPSVLGFV PLWLTVLLHE GGTLLVCLNS VRGLNDPSWS WKQDIVHLIN
801: KLRSQEPTSS SSNSLSSAH

Arabidopsis Description

HMA1Probable cadmium/zinc-transporting ATPase HMA1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M3H5]
SUBAcon: [plasma membrane,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.