CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 3
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH61581	Soybean	plastid	51.38	91.88
GSMUA_Achr8P30620_001	Banana	cytosol	65.89	74.0
VIT_04s0008g01960.t01	Wine grape	plastid	71.98	73.2
Solyc08g061610.2.1	Tomato	plastid	70.76	71.48
AT5G21930.1	Thale cress	plastid	68.66	70.22
CDX92394	Canola	plastid	68.66	70.06
Bra002374.1-P	Field mustard	plastid	68.44	69.83
CDY16605	Canola	plastid	68.44	69.83
TraesCS4B01G293600.3	Wheat	mitochondrion, plasma membrane	55.7	68.53
HORVU0Hr1G009080.5	Barley	mitochondrion, plasma membrane	55.81	66.23
HORVU4Hr1G076330.4	Barley	golgi, mitochondrion	45.4	66.02
KXG40056	Sorghum	plastid	62.79	63.0
TraesCS4D01G292300.2	Wheat	plastid	61.79	62.77
TraesCS4A01G010800.1	Wheat	mitochondrion	61.24	62.13
Os03t0178100-00	Rice	plastid	62.02	62.08
Zm00001d027884_P003	Maize	plastid	61.9	61.97
KRH58274	Soybean	plasma membrane	36.21	44.37
KRH42155	Soybean	plastid	39.98	38.53
KRH41158	Soybean	plasma membrane	26.25	34.96
KRH59857	Soybean	cytosol	8.64	31.84
KRH37212	Soybean	cytosol	30.56	27.99
KRG95266	Soybean	cytosol	30.12	27.64
KRH12191	Soybean	cytosol	30.45	27.61
KRH07428	Soybean	cytosol	27.35	27.05
KRH58516	Soybean	cytosol	29.57	26.86
KRH66147	Soybean	cytosol	28.35	26.83
KRH27938	Soybean	plasma membrane	8.42	26.76
KRH42397	Soybean	cytosol	29.46	26.76
KRH77528	Soybean	mitochondrion	25.36	26.47
KRH77529	Soybean	cytosol	28.57	26.41
KRH02816	Soybean	plasma membrane	20.6	24.87
KRH04519	Soybean	plastid	19.82	21.91
KRH37273	Soybean	cytosol, plasma membrane, vacuole	21.37	21.81
KRH57989	Soybean	plasma membrane, plastid	19.71	21.39
KRH19069	Soybean	plasma membrane	21.48	17.7

Protein Annotations

EntrezGene:100127402	Gene3D:2.70.150.20	MapMan:24.1.2.1.1	Gene3D:3.30.70.100	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000
EMBL:ACUP02003415	InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	EnsemblPlantsGene:GLYMA_06G056300
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006812	GO:GO:0008150
GO:GO:0009507	GO:GO:0009536	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0019829
GO:GO:0030001	GO:GO:0046872	GO:GO:0099132	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:HMA_dom
InterPro:HMA_dom_sf	UniProt:I1K8G7	InterPro:IPR006121	InterPro:IPR023214	InterPro:IPR023299	EnsemblPlants:KRH52252
ProteinID:KRH52252	ProteinID:KRH52252.1	InterPro:P-typ_ATPase_IB	PFAM:PF00122	PFAM:PF00403	PFAM:PF00702
PRINTS:PR00119	ScanProsite:PS00154	PFscan:PS50846	PANTHER:PTHR43520	PANTHER:PTHR43520:SF10	InterPro:P_typ_ATPase
SUPFAM:SSF55008	SUPFAM:SSF56784	SUPFAM:SSF81653	SUPFAM:SSF81660	SUPFAM:SSF81665	TIGRFAMs:TIGR01494
TIGRFAMs:TIGR01525	TMHMM:TMhelix	UniParc:UPI00023C3D25	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr6:+:4240910..4249727

Molecular Weight (calculated)

96224.4 Da

IEP (calculated)

6.741

GRAVY (calculated)

0.189

Length

903 amino acids

Sequence
(BLAST)

001: MATHLFRLPL FSQPKLSFNH TPNHALHFIS PLPAKRHRTR NRHRRRILRP PFSVSNSFGT EIGSPEFSLL QSRREAKDSP VLLDVTGMMC GACVSRVKNI
101: LSADDRVDSV VVNMLTETAA VKLRRIEEEP ASVAESLALR LSDCGFPTKR RASSSGVTEN VRKWKELVKK KEELVVKSRS RVAFAWTLVA LCCGSHASHI
201: FHSLGIHIAH GPLMEILHSS YLKGGLALGS LLGPGRELLF DGLNAFKKGS PNMNSLVGFG SVAAFIISSI SLLNPGLAWD ASFFDEPVML LGFVLLGRSL
301: EEKARIQASS DMNELLSLIS TQSRLVITST EGSPSTDTVL CSDAICVEVP TDDIRVGDSV LVLPGETIPI DGTVISGRSV IDESMLTGES LPVFKEKGLT
401: VSAGTINWDG PLRIEASSTG SNTMISKIVR MVEDAQSREA PVQRLADSIA GPFVYSVMTL SAATFAFWYF VGSHIFPDVL LNDIAGPEGD PLLLSLKLSV
501: DVLVVSCPCA LGLATPTAIL VGTSLGARKG LLIRGGDVLE RLAGINYIAL DKTGTLTKGK PVVSAISSIL YGESEILRLA AAVEKTASHP IAKAIVNKAE
601: SLELVLPVTK GQLVEPGFGT LAEVDGHLIA VGSLEWVHER FQTRANPSDL TNLENSLMNH SLNTTSSKYS KTVVYVGREG EGIIGAIAIS DTVREDAEST
701: ITRLKQKGIK TVLLSGDREE AVATVADTVG IENDFVKASL SPQQKSGFIS SLKAAGHHVA MVGDGINDAP SLAVADVGIA LQNEAQENAA SDAASIILLG
801: NKISQVVDAL DLAQATMGKV YQNLCWAVAY NVVAIPIAAG VLLPHFDFAM TPSLSGGLMA LSSIFVVGNS LLLQLHGSQI SRKVGSTIEI ISSHSNTDML
901: NLK

Best Arabidopsis Sequence Match ( AT5G21930.1 )
(BLAST)

001: MASNLLRFPL PPPSSLHIRP SKFLVNRCFP RLRRSRIRRH CSRPFFLVSN SVEISTQSFE STESSIESVK SITSDTPILL DVSGMMCGGC VARVKSVLMS
101: DDRVASAVVN MLTETAAVKF KPEVEVTADT AESLAKRLTE SGFEAKRRVS GMGVAENVKK WKEMVSKKED LLVKSRNRVA FAWTLVALCC GSHTSHILHS
201: LGIHIAHGGI WDLLHNSYVK GGLAVGALLG PGRELLFDGI KAFGKRSPNM NSLVGLGSMA AFSISLISLV NPELEWDASF FDEPVMLLGF VLLGRSLEER
301: AKLQASTDMN ELLSLISTQS RLVITSSDNN TPVDSVLSSD SICINVSVDD IRVGDSLLVL PGETFPVDGS VLAGRSVVDE SMLTGESLPV FKEEGCSVSA
401: GTINWDGPLR IKASSTGSNS TISKIVRMVE DAQGNAAPVQ RLADAIAGPF VYTIMSLSAM TFAFWYYVGS HIFPDVLLND IAGPDGDALA LSLKLAVDVL
501: VVSCPCALGL ATPTAILIGT SLGAKRGYLI RGGDVLERLA SIDCVALDKT GTLTEGRPVV SGVASLGYEE QEVLKMAAAV EKTATHPIAK AIVNEAESLN
601: LKTPETRGQL TEPGFGTLAE IDGRFVAVGS LEWVSDRFLK KNDSSDMVKL ESLLDHKLSN TSSTSRYSKT VVYVGREGEG IIGAIAISDC LRQDAEFTVA
701: RLQEKGIKTV LLSGDREGAV ATVAKNVGIK SESTNYSLSP EKKFEFISNL QSSGHRVAMV GDGINDAPSL AQADVGIALK IEAQENAASN AASVILVRNK
801: LSHVVDALSL AQATMSKVYQ NLAWAIAYNV ISIPIAAGVL LPQYDFAMTP SLSGGLMALS SIFVVSNSLL LQLHKSETSK NSL

Arabidopsis Description

PAA2Copper-transporting ATPase PAA2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:B9DFX7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.