CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 6
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400032161	Potato	cytosol, plasma membrane, vacuole	14.1	92.42
KRH41158	Soybean	plasma membrane	57.57	73.45
KRG95266	Soybean	cytosol	80.23	70.53
KRH27938	Soybean	plasma membrane	23.12	70.42
VIT_02s0025g03640.t01	Wine grape	golgi, peroxisome, plasma membrane	38.96	67.94
Solyc08g080870.2.1	Tomato	cytosol	73.29	66.46
AT1G63440.1	Thale cress	mitochondrion	74.1	64.42
CDX91834	Canola	cytosol, peroxisome, plasma membrane	63.81	64.34
KRH77529	Soybean	cytosol	70.64	62.54
KRH59857	Soybean	cytosol	17.69	62.45
CDY34353	Canola	mitochondrion	71.91	60.27
CDY50396	Canola	cytosol	67.75	60.23
CDY25498	Canola	mitochondrion	71.79	60.06
CDY49160	Canola	cytosol	67.05	59.61
Bra003110.1-P	Field mustard	cytosol	67.05	59.37
CDX93870	Canola	endoplasmic reticulum, plasma membrane	49.13	58.22
Bra027641.1-P	Field mustard	mitochondrion	73.76	53.52
KRH66147	Soybean	cytosol	53.53	48.53
KRH07428	Soybean	cytosol	49.25	46.66
KRH37212	Soybean	cytosol	48.09	42.19
KRH12191	Soybean	cytosol	47.86	41.57
KRH58516	Soybean	cytosol	46.59	40.54
KRH42397	Soybean	cytosol	46.47	40.44
VIT_02s0025g03630.t01	Wine grape	cytosol	78.38	35.02
KRH58274	Soybean	plasma membrane	24.62	28.9
KRH61581	Soybean	plastid	16.3	27.92
KRH52252	Soybean	plastid	26.47	25.36
KRH42155	Soybean	plastid	27.17	25.08
KRH02816	Soybean	plasma membrane	17.69	20.45
KRH37273	Soybean	cytosol, plasma membrane, vacuole	18.84	18.42
KRH04519	Soybean	plastid	17.34	18.36
KRH57989	Soybean	plasma membrane, plastid	17.57	18.27
KRH19069	Soybean	plasma membrane	20.23	15.97

Protein Annotations

Gene3D:2.70.150.20	MapMan:24.1.2.1.1	Gene3D:3.30.70.100	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	UniProt:A0A0R0LL96
EMBL:ACUP02000677	EMBL:ACUP02000678	EMBL:ACUP02000679	InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cyto_dom_N
InterPro:ATPase_P-typ_transduc_dom_A_sf	EnsemblPlantsGene:GLYMA_01G219000	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215
GO:GO:0005388	GO:GO:0005488	GO:GO:0005507	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005886	GO:GO:0005887	GO:GO:0006810	GO:GO:0006812	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0019829	GO:GO:0030001	GO:GO:0043231	GO:GO:0046872
GO:GO:0070588	GO:GO:0099132	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:HMA_Cu_ion-bd	InterPro:HMA_dom
InterPro:HMA_dom_sf	InterPro:Heavy-metal-associated_CS	InterPro:IPR006121	InterPro:IPR023214	InterPro:IPR023299	EnsemblPlants:KRH77528
ProteinID:KRH77528	ProteinID:KRH77528.1	PFAM:PF00122	PFAM:PF00403	PRINTS:PR00942	PRINTS:PR00943
ScanProsite:PS00154	ScanProsite:PS01047	PFscan:PS50846	PANTHER:PTHR24093	PANTHER:PTHR24093:SF417	InterPro:P_typ_ATPase
SUPFAM:SSF55008	SUPFAM:SSF56784	SUPFAM:SSF81653	SUPFAM:SSF81665	TIGRFAMs:TIGR00003	TIGRFAMs:TIGR01494
TMHMM:TMhelix	UniParc:UPI0006EE0328	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:54869884..54874793

Molecular Weight (calculated)

93683.8 Da

IEP (calculated)

6.747

GRAVY (calculated)

0.221

Length

865 amino acids

Sequence
(BLAST)

001: MAKLLALSCW RSLSPRPHYP SMPKYPKGES VATVQELSES TAVLSVVGMS CAACAGSVEK AVKRLPGIRE AIVDVLNNRA HVIFYPSFVN VETIREAIED
101: AGFEAALLTD DKKSVQVCRI QIKGMSCTSC SSTLESVLQA LDGVLEARVG LATEEAQVHY NPILLTTNHI LQAIQDSGFE AQLISSSQDL SKIDLLVEGD
201: ITMKLIEDSL QTLPGVLAVD ITTELNKISV SYKPDVTGPR NFINVIHETG NGNFKAKIYP TEEGQRDSHR RQETKQYYRS FLWSLVFTIP VFLTSMVLMY
301: VPGVKDSLDA KIVNMLTVGE VARWVLSTPV QFVLGWRFYY GSYKALRRGS ANMDVLIALG TNAAYFYSVY SVLRAATSPH FEGNDFFETS AMLISFILLG
401: KYLEILAKGK TSDAIAKLMN LTPDTAVLLT LDGDGSVVGE EEIDSRLVQK NDVIKVVPGA KVASDGFVVW GQSHVNESMI TGEARPVAKR KGDTVIGGTV
501: NENGVLHVKA TRVGSESALS QIVRLVESAQ MAKAPVQKFA DRISKYFVPL VIIISFTTWL AWFLAGKYHA YPKSWIPSSM DTFELALQFG ISVMVIACPC
601: ALGLATPTAV MVGTGVGASQ GVLIKGGQAL ESAHKVDCIV FDKTGTLTVG KPVIVRTELL TKMVLQEFYE LVAAGHGVKA SVHNKEIIVG NKSLFADHNI
701: AIPDDAEYIL AEAQKMAQTG IVASGYTVAM VGDGINDSPA LVAADVGMAI GAGTDIAIEA ADIVLMKSNL EDVITAIDLS RKTFSRIRLN YFWALGYNLL
801: GIPIAAGALF PSTRFRLPPW IAGAAMAASS VSVVCCSLLL KYYRRPRKLD NLEIRGIRVE SSSDI

Best Arabidopsis Sequence Match ( AT1G63440.1 )
(BLAST)

001: MATKLLSLTC IRKERFSERY PLVRKHLTRS RDGGGGSSSE TAAFEIDDPI SRAVFQVLGM TCSACAGSVE KAIKRLPGIH DAVIDALNNR AQILFYPNSV
101: DVETIRETIE DAGFEASLIE NEANERSRQV CRIRINGMTC TSCSSTIERV LQSVNGVQRA HVALAIEEAE IHYDPRLSSY DRLLEEIENA GFEAVLISTG
201: EDVSKIDLKI DGELTDESMK VIERSLEALP GVQSVEISHG TDKISVLYKP DVTGPRNFIQ VIESTVFGHS GHIKATIFSE GGVGRESQKQ GEIKQYYKSF
301: LWSLVFTVPV FLTAMVFMYI PGIKDLLMFK VINMLTVGEI IRCVLATPVQ FVIGWRFYTG SYKALRRGSA NMDVLIALGT NAAYFYSLYT VLRAATSPDF
401: KGVDFFETSA MLISFIILGK YLEVMAKGKT SQAIAKLMNL APDTAILLSL DKEGNVTGEE EIDGRLIQKN DVIKIVPGAK VASDGYVIWG QSHVNESMIT
501: GEARPVAKRK GDTVIGGTLN ENGVLHVKVT RVGSESALAQ IVRLVESAQL AKAPVQKLAD RISKFFVPLV IFLSFSTWLA WFLAGKLHWY PESWIPSSMD
601: SFELALQFGI SVMVIACPCA LGLATPTAVM VGTGVGASQG VLIKGGQALE RAHKVNCIVF DKTGTLTMGK PVVVKTKLLK NMVLREFYEL VAATEVNSEH
701: PLAKAIVEYA KKFRDDEENP AWPEACDFVS ITGKGVKATV KGREIMVGNK NLMNDHKVII PDDAEELLAD SEDMAQTGIL VSINSELIGV LSVSDPLKPS
801: AREAISILKS MNIKSIMVTG DNWGTANSIA REVGIDSVIA EAKPEQKAEK VKELQAAGHV VAMVGDGIND SPALVAADVG MAIGAGTDIA IEAADIVLMK
901: SNLEDVITAI DLSRKTFSRI RLNYVWALGY NLMGIPIAAG VLFPGTRFRL PPWIAGAAMA ASSVSVVCCS LLLKNYKRPK KLDHLEIREI QVERV

Arabidopsis Description

HMA5Probable copper-transporting ATPase HMA5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SH30]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.