CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 3
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH52252	Soybean	plastid	91.88	51.38
HORVU4Hr1G076330.4	Barley	golgi, mitochondrion	54.06	43.96
VIT_04s0008g01960.t01	Wine grape	plastid	68.71	39.08
GSMUA_Achr8P30620_001	Banana	cytosol	61.39	38.56
TraesCS4B01G293600.3	Wheat	mitochondrion, plasma membrane	55.25	38.01
Solyc08g061610.2.1	Tomato	plastid	66.53	37.58
CDX92394	Canola	plastid	64.95	37.06
Bra002374.1-P	Field mustard	plastid	64.75	36.95
AT5G21930.1	Thale cress	plastid	64.36	36.81
CDY16605	Canola	plastid	64.36	36.72
HORVU0Hr1G009080.5	Barley	mitochondrion, plasma membrane	55.05	36.53
Os03t0178100-00	Rice	plastid	60.79	34.04
KXG40056	Sorghum	plastid	60.4	33.89
TraesCS4D01G292300.2	Wheat	plastid	58.81	33.41
Zm00001d027884_P003	Maize	plastid	59.6	33.37
TraesCS4A01G010800.1	Wheat	mitochondrion	58.22	33.03
KRH58274	Soybean	plasma membrane	36.63	25.1
KRH42155	Soybean	plastid	39.21	21.13
KRH41158	Soybean	plasma membrane	28.32	21.09
KRH27938	Soybean	plasma membrane	11.68	20.77
KRH12191	Soybean	cytosol	33.07	16.77
KRH37212	Soybean	cytosol	32.48	16.63
KRG95266	Soybean	cytosol	31.88	16.36
KRH77528	Soybean	mitochondrion	27.92	16.3
KRH58516	Soybean	cytosol	30.69	15.59
KRH42397	Soybean	cytosol	30.5	15.49
KRH07428	Soybean	cytosol	27.92	15.44
KRH77529	Soybean	cytosol	29.7	15.35
KRH66147	Soybean	cytosol	28.91	15.3
KRH02816	Soybean	plasma membrane	22.18	14.97
KRH04519	Soybean	plastid	21.98	13.59
KRH57989	Soybean	plasma membrane, plastid	22.18	13.46
KRH37273	Soybean	cytosol, plasma membrane, vacuole	22.18	12.66
KRH19069	Soybean	plasma membrane	22.97	10.58
KRH59857	Soybean	cytosol	1.78	3.67

Protein Annotations

Gene3D:2.70.150.20	MapMan:24.1.2.1.1	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	UniProt:A0A0R0K4C4	EMBL:ACUP02002173
InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	EnsemblPlantsGene:GLYMA_04G056100	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:HAD_sf	InterPro:IPR023214
InterPro:IPR023299	EnsemblPlants:KRH61581	ProteinID:KRH61581	ProteinID:KRH61581.1	PFAM:PF00122	PFAM:PF00702
PRINTS:PR00119	ScanProsite:PS00154	PANTHER:PTHR43520	PANTHER:PTHR43520:SF10	InterPro:P_typ_ATPase	SUPFAM:SSF81653
SUPFAM:SSF81660	TIGRFAMs:TIGR01494	UniParc:UPI0006EE02D3	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr4:+:4532181..4538985

Molecular Weight (calculated)

54306.1 Da

IEP (calculated)

6.585

GRAVY (calculated)

0.195

Length

505 amino acids

Sequence
(BLAST)

001: MATHLFRLSL SSQPKLCFNY TPNHALHFIS PLPAKRRGSR CRHRREILRS PFAVSNSFGT EIGSPDLALL QDRREAKDSP VLLDVTGMMC GACISRVMLL
101: GFVLLGRSLE EKARIQASSD MNELLSLIST QSRLVITSTE GSPSTDTVLS SDAICVEVPT DDIRVGDSVL VLPGETIPID GMVISGRSVV DESMLTGESL
201: PVFKEKGLTV SEGTINWDGP LRIEASSTGS NTMISKIVRM VEDAQSREAP VQRLADSIAG PFVYSVMTLS AATFAFWYSV GSHIFPEVLL NDIAGPEGDP
301: LLLSLKLSVD VVSCPCALGL ATPTAILVGT SLGARKGLLI RGGDVLERLA GIHYIALDKT GTLTKGKPVV SAISSILYGE SEILRLAAAV EKTASHPIAK
401: AIVNKAESLE LIFPVTKGQL VEPGFGTLAE VDGHLIAVGS LEWVHERFQT RGNLPDLTNL EHSLMNHSLN TTSSKYSKTV VYVKEKASLV LLPYLTLCVK
501: MLNLL

Best Arabidopsis Sequence Match ( AT5G21930.1 )
(BLAST)

001: MASNLLRFPL PPPSSLHIRP SKFLVNRCFP RLRRSRIRRH CSRPFFLVSN SVEISTQSFE STESSIESVK SITSDTPILL DVSGMMCGGC VARVKSVLMS
101: DDRVASAVVN MLTETAAVKF KPEVEVTADT AESLAKRLTE SGFEAKRRVS GMGVAENVKK WKEMVSKKED LLVKSRNRVA FAWTLVALCC GSHTSHILHS
201: LGIHIAHGGI WDLLHNSYVK GGLAVGALLG PGRELLFDGI KAFGKRSPNM NSLVGLGSMA AFSISLISLV NPELEWDASF FDEPVMLLGF VLLGRSLEER
301: AKLQASTDMN ELLSLISTQS RLVITSSDNN TPVDSVLSSD SICINVSVDD IRVGDSLLVL PGETFPVDGS VLAGRSVVDE SMLTGESLPV FKEEGCSVSA
401: GTINWDGPLR IKASSTGSNS TISKIVRMVE DAQGNAAPVQ RLADAIAGPF VYTIMSLSAM TFAFWYYVGS HIFPDVLLND IAGPDGDALA LSLKLAVDVL
501: VVSCPCALGL ATPTAILIGT SLGAKRGYLI RGGDVLERLA SIDCVALDKT GTLTEGRPVV SGVASLGYEE QEVLKMAAAV EKTATHPIAK AIVNEAESLN
601: LKTPETRGQL TEPGFGTLAE IDGRFVAVGS LEWVSDRFLK KNDSSDMVKL ESLLDHKLSN TSSTSRYSKT VVYVGREGEG IIGAIAISDC LRQDAEFTVA
701: RLQEKGIKTV LLSGDREGAV ATVAKNVGIK SESTNYSLSP EKKFEFISNL QSSGHRVAMV GDGINDAPSL AQADVGIALK IEAQENAASN AASVILVRNK
801: LSHVVDALSL AQATMSKVYQ NLAWAIAYNV ISIPIAAGVL LPQYDFAMTP SLSGGLMALS SIFVVSNSLL LQLHKSETSK NSL

Arabidopsis Description

PAA2Copper-transporting ATPase PAA2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:B9DFX7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.