Factsheet for TraesCS4B01G293600.3

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane

Predictor Summary:

mitochondrion 4
golgi 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU0Hr1G009080.5	Barley	mitochondrion, plasma membrane	97.41	93.96
HORVU4Hr1G076330.4	Barley	golgi, mitochondrion	75.2	88.89
TraesCS4A01G010800.1	Wheat	mitochondrion	98.09	80.9
TraesCS4D01G292300.2	Wheat	plastid	96.32	79.53
Os03t0178100-00	Rice	plastid	88.15	71.73
KXG40056	Sorghum	plastid	86.51	70.56
Zm00001d027884_P003	Maize	plastid	85.42	69.51
GSMUA_Achr8P30620_001	Banana	cytosol	72.34	66.04
AT5G21930.1	Thale cress	plastid	67.85	56.4
VIT_04s0008g01960.t01	Wine grape	plastid	68.12	56.31
CDY16605	Canola	plastid	67.85	56.27
Bra002374.1-P	Field mustard	plastid	67.71	56.16
CDX92394	Canola	plastid	67.71	56.16
KRH52252	Soybean	plastid	68.53	55.7
Solyc08g061610.2.1	Tomato	plastid	67.71	55.59
KRH61581	Soybean	plastid	38.01	55.25
TraesCS7B01G135300.1	Wheat	plastid	42.37	32.67
TraesCS6B01G192400.1	Wheat	cytosol, plastid	32.02	23.98
TraesCS2B01G429200.2	Wheat	mitochondrion	31.47	23.24
TraesCS7B01G382300.1	Wheat	cytosol	31.47	23.08
TraesCS5B01G388000.1	Wheat	plasma membrane	25.61	22.68
TraesCS7B01G337700.1	Wheat	extracellular, plasma membrane	12.4	22.64
TraesCS7B01G320900.1	Wheat	plasma membrane	23.57	22.58
TraesCS6B01G184800.1	Wheat	cytosol	29.43	22.22
TraesCS7B01G320100.2	Wheat	plasma membrane	23.84	17.11

Protein Annotations

Gene3D:2.70.150.20	MapMan:24.1.2.1.1	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf
InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215
GO:GO:0005375	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006810	GO:GO:0006812	GO:GO:0006825	GO:GO:0008150	GO:GO:0009535	GO:GO:0009536
GO:GO:0009579	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0019829	InterPro:HAD-like_sf
InterPro:HAD_sf	InterPro:IPR023214	InterPro:IPR023299	InterPro:P-typ_ATPase_IB	PFAM:PF00122	PFAM:PF00702
PRINTS:PR00119	ScanProsite:PS00154	PANTHER:PTHR43520	PANTHER:PTHR43520:SF10	InterPro:P_typ_ATPase	SUPFAM:SSF56784
SUPFAM:SSF81653	SUPFAM:SSF81660	SUPFAM:SSF81665	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01525	TMHMM:TMhelix
EnsemblPlantsGene:TraesCS4B01G293600	EnsemblPlants:TraesCS4B01G293600.3	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr4B:-:579391381..579397973

Molecular Weight (calculated)

77103.0 Da

IEP (calculated)

5.498

GRAVY (calculated)

0.218

Length

734 amino acids

Sequence
(BLAST)

001: MAARKSELLT RSRGRVAFAW TLVALCCGSH ASHLLHSFGI HIGHGTFLDV LHNSYVKCGL AMVALFGPGR DILFDGLRAF KQGSPNMNSL VGFGSAAAFA
101: ISAVSLLNPE LAWNSTFFDE PVMLLGFVLL GRSLEESARL KASSDMNELI SLLSPQSRLV ITSSSDDLPS DGILNSDAIT VEVPVDDVRV GDSVLVLPGE
201: TIPVDGNVTG GSSFVDESML TGESLPVAKE KGCPVFSGTV NWDGPLRIKA TTTGPSSTIA KIIRMVEDAQ AHEAPVQRLA DAIAGPFVYT VMTLSAATFS
301: FWYLLGTHLF PEVLLNDISG PDGDSLLLSL KLAVDVLVVS CPCALGLATP TAILIGTSMG AKRGLLIRGG DVLERLAGID AIVLDKTGTL TKGKPVVTSI
401: ASLAYDKMEI LRLAAAVEKT ALHPIANAIT KETELCKLDI PTTSGQLTQP GFGCLAEVDG RLVAVGNLDW VHNRFETKAS PTELSDLGKR LEFVPSSEAS
501: SSNQSKSIAY IGREGEGIIG AIAISDVLRD DAKSTVDRLQ QEGIATYILS GDRKEAVEGI GETVGIRSEN RRSSLTPQEK AGIISTLQGE GHRVAMVGDG
601: INDAPSLAAA DVGIAMGTHS KENAASDAAS VVLLGNRLSQ VADALSLSKA TMAKVHQNLA WAVAYNILAI PVAAGALLPQ FDFAMTPSLS GGLMALSSIF
701: VVSNSLLLQL HGSLQKAERP GPDHLKSRPK SQIL

Best Arabidopsis Sequence Match ( AT5G21930.1 )
(BLAST)

001: MASNLLRFPL PPPSSLHIRP SKFLVNRCFP RLRRSRIRRH CSRPFFLVSN SVEISTQSFE STESSIESVK SITSDTPILL DVSGMMCGGC VARVKSVLMS
101: DDRVASAVVN MLTETAAVKF KPEVEVTADT AESLAKRLTE SGFEAKRRVS GMGVAENVKK WKEMVSKKED LLVKSRNRVA FAWTLVALCC GSHTSHILHS
201: LGIHIAHGGI WDLLHNSYVK GGLAVGALLG PGRELLFDGI KAFGKRSPNM NSLVGLGSMA AFSISLISLV NPELEWDASF FDEPVMLLGF VLLGRSLEER
301: AKLQASTDMN ELLSLISTQS RLVITSSDNN TPVDSVLSSD SICINVSVDD IRVGDSLLVL PGETFPVDGS VLAGRSVVDE SMLTGESLPV FKEEGCSVSA
401: GTINWDGPLR IKASSTGSNS TISKIVRMVE DAQGNAAPVQ RLADAIAGPF VYTIMSLSAM TFAFWYYVGS HIFPDVLLND IAGPDGDALA LSLKLAVDVL
501: VVSCPCALGL ATPTAILIGT SLGAKRGYLI RGGDVLERLA SIDCVALDKT GTLTEGRPVV SGVASLGYEE QEVLKMAAAV EKTATHPIAK AIVNEAESLN
601: LKTPETRGQL TEPGFGTLAE IDGRFVAVGS LEWVSDRFLK KNDSSDMVKL ESLLDHKLSN TSSTSRYSKT VVYVGREGEG IIGAIAISDC LRQDAEFTVA
701: RLQEKGIKTV LLSGDREGAV ATVAKNVGIK SESTNYSLSP EKKFEFISNL QSSGHRVAMV GDGINDAPSL AQADVGIALK IEAQENAASN AASVILVRNK
801: LSHVVDALSL AQATMSKVYQ NLAWAIAYNV ISIPIAAGVL LPQYDFAMTP SLSGGLMALS SIFVVSNSLL LQLHKSETSK NSL

Arabidopsis Description

PAA2Copper-transporting ATPase PAA2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:B9DFX7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.