Factsheet for TraesCS5B01G388000.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G383400.1	Wheat	plasma membrane	93.97	95.47
TraesCS5D01G392700.1	Wheat	plasma membrane	94.57	91.91
HORVU5Hr1G094430.8	Barley	endoplasmic reticulum, plasma membrane	82.15	89.02
Zm00001d005190_P001	Maize	plastid	70.93	65.48
EER96099	Sorghum	cytosol	70.08	64.92
Os07t0232900-01	Rice	cytosol, nucleus, plasma membrane	74.91	61.85
TraesCS7B01G320900.1	Wheat	plasma membrane	57.06	61.75
GSMUA_Achr5P22660_001	Banana	plasma membrane	54.64	55.45
VIT_11s0103g00370.t01	Wine grape	plasma membrane	47.65	55.01
CDY51647	Canola	golgi, plasma membrane, vacuole	22.44	53.76
AT4G30120.1	Thale cress	cytosol	34.62	52.95
CDY28160	Canola	cytosol	46.2	50.53
Bra024103.1-P	Field mustard	peroxisome, plasma membrane, vacuole	46.44	50.39
Bra011165.1-P	Field mustard	cytosol	45.96	50.26
CDX68627	Canola	cytosol, plasma membrane, vacuole	45.96	50.26
CDY69827	Canola	plasma membrane	37.64	49.52
CDY72630	Canola	golgi, plasma membrane, vacuole	20.75	49.43
GSMUA_Achr8P24660_001	Banana	cytosol	55.37	48.78
TraesCS7B01G320100.2	Wheat	plasma membrane	59.47	48.19
KRH02816	Soybean	plasma membrane	42.82	47.46
CDY51646	Canola	cytosol, plasma membrane, vacuole	11.1	47.18
GSMUA_Achr5P21940_001	Banana	extracellular, plasma membrane	53.2	47.17
CDY51690	Canola	cytosol, plasma membrane, vacuole	9.65	46.78
Bra011164.1-P	Field mustard	cytosol, plasma membrane	48.01	45.64
CDY30170	Canola	cytosol, peroxisome, plasma membrane	48.01	45.49
CDY69511	Canola	plasma membrane	39.08	45.25
CDY62400	Canola	plasma membrane	47.41	45.07
CDX68625	Canola	plasma membrane	38.6	43.84
KRH37273	Soybean	cytosol, plasma membrane, vacuole	45.96	43.05
Bra024107.1-P	Field mustard	plasma membrane	45.11	42.36
AT4G30110.1	Thale cress	plasma membrane	48.13	41.96
CDY28206	Canola	plasma membrane	35.22	40.5
CDX68623	Canola	cytosol, endoplasmic reticulum, plasma membrane	24.61	37.36
KRH19069	Soybean	plasma membrane	48.61	36.77
CDY51090	Canola	cytosol	46.68	35.57
CDY36489	Canola	cytosol	47.29	34.12
AT2G19110.2	Thale cress	cytosol	46.8	33.11
Bra024449.1-P	Field mustard	cytosol	46.32	32.27
Solyc07g009130.2.1	Tomato	plastid	48.85	31.11
Bra038842.1-P	Field mustard	cytosol	46.92	30.61
TraesCS4B01G293600.3	Wheat	mitochondrion, plasma membrane	22.68	25.61
CDY08717	Canola	cytosol, nucleus, plasma membrane	47.53	25.27
TraesCS7B01G337700.1	Wheat	extracellular, plasma membrane	11.94	24.63
TraesCS6B01G192400.1	Wheat	cytosol, plastid	26.18	22.14
TraesCS7B01G135300.1	Wheat	plastid	25.33	22.06
TraesCS7B01G382300.1	Wheat	cytosol	25.45	21.08
TraesCS2B01G429200.2	Wheat	mitochondrion	25.09	20.93
TraesCS6B01G184800.1	Wheat	cytosol	23.88	20.37
CDY51648	Canola	cytosol	0.97	11.76

Protein Annotations

Gene3D:2.70.150.20	MapMan:24.1.2.1.1	Gene3D:3.30.70.100	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	InterPro:ATPase_P-typ_P_site
InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005575	GO:GO:0006810	GO:GO:0006812
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0019829	GO:GO:0030001
GO:GO:0046872	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:IPR006121
InterPro:IPR023214	InterPro:IPR023299	InterPro:P-typ_ATPase_IB	PFAM:PF00122	PFAM:PF00403	PFAM:PF00702
PRINTS:PR00119	ScanProsite:PS00154	ScanProsite:PS01229	PFscan:PS50846	PANTHER:PTHR43338	PANTHER:PTHR43338:SF2
InterPro:P_typ_ATPase	SUPFAM:SSF55008	SUPFAM:SSF56784	SUPFAM:SSF81653	SUPFAM:SSF81665	TIGRFAMs:TIGR01494
TIGRFAMs:TIGR01512	TIGRFAMs:TIGR01525	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS5B01G388000	EnsemblPlants:TraesCS5B01G388000.1	TIGR:cd02079
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr5B:+:567018263..567021227

Molecular Weight (calculated)

86821.7 Da

IEP (calculated)

6.384

GRAVY (calculated)

0.293

Length

829 amino acids

Sequence
(BLAST)

001: MMGGGESYAA LEESLLPEQA AARRQWEKTY LDVLGVCCSA EVALVERLLA PLDGVRAVSV VVPSRTVVVE HDPAAVSQSR IVKVLNGAGL EASVRAYGSS
101: GVIGRWPSPY IVACGVLLLA SSFRWLLPPL QWLALAAACA GAPPMLLRGI AAASRLTLDI NILMLIAVAG AVALKDYTEA GVIVFLFTTA EWLETLACTK
201: ASAGMSSLMS MIPPKAVLAE TGEVVNVRDI GVGAVIAVRA GEMVPVDGMV VDGQSEVDER SLTGESYPVP KQPHSEVWAG TLNLDGYIAV RTMALAENST
301: VAKMERLVEE AQQSKSRTQR LIDSCAKYYT PAVVVLGAGV ALLPPLLGAR DAERWFRLAL VLLVSACPCA LVLSTPVATF CALLTAARMG VLVKGGDVLE
401: SLGEIKAVAF DKTGTITRGE FTVDMFDVVG HKVQMSHLLY WISSIESKSS HPMAAALVEH AQSKSIEPKP ECVAEFRVLP GEGIYGEIDG MRIYVGNKRV
501: LARGSSCQTV PERMNGLKGV SMGYVICDGD LVGVFSLSDD CRTGAAEAIR ELASMGISSV LLTGDIAEAA MHAQEQLGGA LLEEVHSELF PEDKVRLVGA
601: LKARAGPTMM VGDGMNDAPA LATADVGVSM GISGSAAAME TSHATLMSSD ILRVPEAVRL GRRARRTIAV NMASSVAAKA AVLALAVAWR PVLWAAVLAD
701: VGTCLLVVLN SMLLLGERRG RRGKEDACRA TARSLEMRRS QLAAVSSDAA ATKSVGKTGG DASKGCHCCH KPSRSPEHSV AIDVRADEQR EGPTAATCAP
801: AKKVEVTGSV NASVMPASSS CVSAGCCSP

Best Arabidopsis Sequence Match ( AT2G19110.1 )
(BLAST)

0001: MALQNKEEEK KKVKKLQKSY FDVLGICCTS EVPIIENILK SLDGVKEYSV IVPSRTVIVV HDSLLISPFQ IAKALNEARL EANVRVNGET SFKNKWPSPF
0101: AVVSGLLLLL SFLKFVYSPL RWLAVAAVAA GIYPILAKAF ASIKRPRIDI NILVIITVIA TLAMQDFMEA AAVVFLFTIS DWLETRASYK ATSVMQSLMS
0201: LAPQKAIIAE TGEEVEVDEV KVDTVVAVKA GETIPIDGIV VDGNCEVDEK TLTGEAFPVP KQRDSTVWAG TINLNGYICV KTTSLAGDCV VAKMAKLVEE
0301: AQSSKTKSQR LIDKCSQYYT PAIILVSACV AIVPVIMKVH NLKHWFHLAL VVLVSGCPCG LILSTPVATF CALTKAATSG LLIKSADYLD TLSKIKIVAF
0401: DKTGTITRGE FIVIDFKSLS RDINLRSLLY WVSSVESKSS HPMAATIVDY AKSVSVEPRP EEVEDYQNFP GEGIYGKIDG NDIFIGNKKI ASRAGCSTVP
0501: EIEVDTKGGK TVGYVYVGER LAGFFNLSDA CRSGVSQAMA ELKSLGIKTA MLTGDNQAAA MHAQEQLGNV LDVVHGDLLP EDKSRIIQEF KKEGPTAMVG
0601: DGVNDAPALA TADIGISMGI SGSALATQTG NIILMSNDIR RIPQAVKLAR RARRKVVENV CLSIILKAGI LALAFAGHPL IWAAVLVDVG TCLLVIFNSM
0701: LLLREKKKIG NKKCYRASTS KLNGRKLEGD DDYVVDLEAG LLTKSGNGQC KSSCCGDKKN QENVVMMKPS SKTSSDHSHP GCCGDKKEEK VKPLVKDGCC
0801: SEKTRKSEGD MVSLSSCKKS SHVKHDLKMK GGSGCCASKN EKGKEVVAKS CCEKPKQQVE SVGDCKSGHC EKKKQAEDIV VPVQIIGHAL THVEIELQTK
0901: ETCKTSCCDS KEKVKETGLL LSSENTPYLE KGVLIKDEGN CKSGSENMGT VKQSCHEKGC SDEKQTGEIT LASEEETDDQ DCSSGCCVNE GTVKQSFDEK
1001: KHSVLVEKEG LDMETGFCCD AKLVCCGNTE GEVKEQCRLE IKKEEHCKSG CCGEEIQTGE ITLVSEEETE STNCSTGCCV DKEEVTQTCH EKPASLVVSG
1101: LEVKKDEHCE SSHRAVKVET CCKVKIPEAC ASKCRDRAKR HSGKSCCRSY AKELCSHRHH HHHHHHHHHV SA

Arabidopsis Description

HMA4Putative cadmium/zinc-transporting ATPase HMA4 [Source:UniProtKB/Swiss-Prot;Acc:O64474]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.