CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:

nucleus 2
mitochondrion 1
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plasma membrane
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra024449.1-P	Field mustard	cytosol	70.88	92.86
CDY36489	Canola	cytosol	67.42	91.47
CDY69827	Canola	plasma membrane	35.98	89.05
CDY51090	Canola	cytosol	55.1	78.95
CDY62400	Canola	plasma membrane	41.95	75.0
CDY30170	Canola	cytosol, peroxisome, plasma membrane	41.57	74.06
CDY69511	Canola	plasma membrane	33.55	73.04
CDX68625	Canola	plasma membrane	34.12	72.88
AT2G19110.2	Thale cress	cytosol	54.27	72.18
CDY51647	Canola	golgi, plasma membrane, vacuole	15.39	69.36
CDY28206	Canola	plasma membrane	31.62	68.38
CDX68627	Canola	cytosol, plasma membrane, vacuole	33.03	67.94
CDY28160	Canola	cytosol	32.97	67.81
VIT_11s0103g00370.t01	Wine grape	plasma membrane	31.11	67.55
CDX68623	Canola	cytosol, endoplasmic reticulum, plasma membrane	22.84	65.2
CDY72630	Canola	golgi, plasma membrane, vacuole	14.3	64.08
CDY51690	Canola	cytosol, plasma membrane, vacuole	6.8	61.99
CDY51646	Canola	cytosol, plasma membrane, vacuole	7.7	61.54
KRH02816	Soybean	plasma membrane	28.42	59.22
TraesCS7B01G320900.1	Wheat	plasma membrane	27.26	55.48
GSMUA_Achr5P22660_001	Banana	plasma membrane	28.99	55.32
HORVU5Hr1G094430.8	Barley	endoplasmic reticulum, plasma membrane	24.44	49.8
KRH19069	Soybean	plasma membrane	34.19	48.63
TraesCS7A01G420000.1	Wheat	plasma membrane	29.12	48.35
GSMUA_Achr5P21940_001	Banana	extracellular, plasma membrane	28.93	48.24
TraesCS7D01G412800.1	Wheat	plasma membrane	29.12	48.04
GSMUA_Achr8P24660_001	Banana	cytosol	28.99	48.03
TraesCS5B01G388000.1	Wheat	plasma membrane	25.27	47.53
TraesCS5A01G383400.1	Wheat	plasma membrane	24.63	47.06
HORVU7Hr1G097210.4	Barley	plasma membrane	28.54	47.04
TraesCS7D01G412400.1	Wheat	plasma membrane	29.63	46.06
TraesCS5D01G392700.1	Wheat	plasma membrane	25.14	45.96
TraesCS7A01G419500.1	Wheat	plasma membrane	28.93	45.79
Os06t0700700-02	Rice	plasma membrane	31.24	45.64
HORVU7Hr1G097240.1	Barley	plasma membrane	29.51	45.59
TraesCS7B01G320100.2	Wheat	plasma membrane	29.83	45.45
CDY51648	Canola	cytosol	1.92	44.12
EER90320	Sorghum	plasma membrane	30.15	43.97
EER96099	Sorghum	cytosol	24.76	43.13
Zm00001d005190_P001	Maize	plastid	24.7	42.87
Zm00001d014669_P007	Maize	plasma membrane	30.15	42.77
Solyc07g009130.2.1	Tomato	plastid	34.96	41.86
EER96100	Sorghum	cytosol	24.76	41.37
Zm00001d005189_P001	Maize	plasma membrane	25.21	40.77
Os07t0232900-01	Rice	cytosol, nucleus, plasma membrane	25.72	39.94
Zm00001d019226_P003	Maize	cytosol	18.92	33.03
CDY26408	Canola	golgi, nucleus, plasma membrane	3.34	30.06
CDY67922	Canola	cytosol	4.04	26.47
CDY67984	Canola	cytosol, peroxisome, plasma membrane	4.04	25.71
CDX91834	Canola	cytosol, peroxisome, plasma membrane	12.57	22.84
CDY67923	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	2.44	22.75
CDX92394	Canola	plastid	12.64	22.26
CDY16605	Canola	plastid	12.64	22.26
CDY50771	Canola	cytosol	13.21	20.72
CDY39400	Canola	cytosol	13.28	20.72
CDX75636	Canola	mitochondrion	10.84	20.69
CDX69288	Canola	plastid	10.84	20.63
CDX93870	Canola	endoplasmic reticulum, plasma membrane	9.62	20.55
CDX75363	Canola	plastid	12.32	20.49
CDX68986	Canola	plastid	12.06	20.09
CDY34353	Canola	mitochondrion	12.96	19.57
CDY49160	Canola	cytosol	12.12	19.42
CDY50396	Canola	cytosol	12.12	19.42
CDY25498	Canola	mitochondrion	12.76	19.25
CDY46080	Canola	plastid	8.08	18.67
CDY69037	Canola	cytosol	5.71	15.24
CDY67659	Canola	cytosol	5.71	14.96

Protein Annotations

Gene3D:2.70.150.20	MapMan:24.1.2.1.1	Gene3D:3.30.70.100	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	GO:A0A078F6J3
UniProt:A0A078F6J3	InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	EnsemblPlants:CDY08717
ProteinID:CDY08717	ProteinID:CDY08717.1	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005215	GO:GO:0005488	GO:GO:0005575	GO:GO:0006810	GO:GO:0006812	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0019829	GO:GO:0030001	GO:GO:0046872
GO:GO:0099132	EnsemblPlantsGene:GSBRNA2T00000640001	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:HMA_dom	InterPro:HMA_dom_sf
InterPro:IPR006121	InterPro:IPR023214	InterPro:IPR023299	InterPro:P-typ_ATPase_IB	PFAM:PF00122	PFAM:PF00702
PRINTS:PR00119	ScanProsite:PS00154	PFscan:PS50846	InterPro:P_typ_ATPase	SUPFAM:SSF55008	SUPFAM:SSF56784
SUPFAM:SSF81653	SUPFAM:SSF81665	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01512	TIGRFAMs:TIGR01525	TMHMM:TMhelix
UniParc:UPI0004EDD578	SEG:seg	:	:	:	:

Description

BnaA06g25070DBnaA06g25070D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F6J3]

Coordinates

chrLK031989:+:3354..13240

Molecular Weight (calculated)

169544.0 Da

IEP (calculated)

7.341

GRAVY (calculated)

-0.267

Length

1559 amino acids

Sequence
(BLAST)

0001: MELQNEDKNK EEEKNTKKKW QKSYFDVLGI CCSSEVPLIE NILKSLDGVK EYSVIVPSRT VIVVHDNLLI SPFQIAKALN QAKFEANVKV DGKTNFKNKW
0101: PSPFALASGI LLLLSFLKFV YPPLRWIAVA AVAAGIYPIL AKAVASIGRK RVDINILVII TVAATLAMQD YMEAAAVVFL FTIAEWLETR ASYKATAVMQ
0201: SLMSLAPQKA IIAETGEEVE VDEVKVNTIV AVKAGETIPI DGIVVDGNCE VDEKTLTGEA YPVPKQRDST VWAGTINLNG YVSVKTTSLA SDCVVAKMAK
0301: LVEEAQSSKT KSQRLIDKCS QYYTPAIILV SGGFAVVPAV MKVHNLNHWF HLALVVLVSA CPCGLILSTP VATFCALTKA ATSGLLIKSA DYLDTLSKIK
0401: ITAFDKTGTI TRGEFIVIEF RSLSRDISLH NLLYWVSSVE SKSSHPMAAT IIDYAKSVDV EPRTEEVEDY QNFPGEGIYG KIDGNDIYIG NRRIGSRAKC
0501: STVPEIEVDT NKGGKTVGYI YVGERLAGVF NLSDACRSGV AQAMKELKDL GIKTAMLTGD NQDAAMHAQE QLGNAMDVVH GELLPEDKSR IILEFKKEGP
0601: TAMVGDGVND APALATADIG ISMGISGSAL ATQTGHIILM SNDIRRIPQA IRLARRSRRK VVENLFISIT LKVGILVLAF TGHPLIWAAV LADVGTCLLV
0701: ILNSMLLLRD KDKTKNKKCY KASSTLLNGK KLEGDAEEEL DLEAGLLTKS GQCNSGCCGE KKKQEKVKPS GKSSSTHRHS GCCGDKQQQD NVKMTVKESC
0801: CRGKSKILER DLASLRSCNK NLKIKGGSGC CDKKKEKLKE TMQILGGQEV SSVESKSSHP MAATIIDYAK SVDVEPRTEE VEDYQNFPGE GIYGKIDGND
0901: IYIGNRRIGS RAKCSTVPEI EVDTNKGGKT VGYIYVGERL AGVFNLSDAC RSGVAQAMKE LKDLGIKTAM LTGDNQDAAM HAQEQLGNAM DVVHGELLPE
1001: DKSRIILEFK KEGPTAMVGD GVNDAPALAT ADIGISMGIS GSALATQTGH IILMSNDIRR IPQAIRLARR ARRKVVENLF ISITLKVGIL VLAFAGHPLI
1101: WAAVLADVGT CLLVILNSML LLRDKDRAKN KKCYRASSTL LNGKKLEGGA EEELDLEAGL LTKSGQCNSG CCGDKKKQEK VKPSGKSSST HRHSGCCGDK
1201: QQQDNVKTIV KESCCGEKNK IHMASLSSCK KSTHVKKGGS GCCDKKKEKM KETVAKRCCE EKEKNVEMQI LGGQECHEKT CLDIETGDSK LVCYGETEGE
1301: VGEKLKNERE CKSGCCSDER KQTEEITLAS EEETTEILDC SSSVKQSSHE STCLEVKEQF DLKIENEGHC KSDCCGDEKQ TGEITMACEE ETDGSDCSST
1401: CCGNKEEVEQ SCHEKACLDI EAGVSCDLKL ACCGNTEGEV KEKLDFEEGL QIKNQGQCKS DCGLKEEGSS SLVGKEREMV KVLSQSSSCC TSPTELQVKK
1501: KKIEICCKVK TPEAVACGSI KCKEREKRHI GKSCCRSYAK EYCSHRHHHH HHHHHVGAV

Best Arabidopsis Sequence Match ( AT2G19110.2 )
(BLAST)

0001: MALQNKEEEK KKVKKLQKSY FDVLGICCTS EVPIIENILK SLDGVKEYSV IVPSRTVIVV HDSLLISPFQ IAKALNEARL EANVRVNGET SFKNKWPSPF
0101: AVVSGLLLLL SFLKFVYSPL RWLAVAAVAA GIYPILAKAF ASIKRPRIDI NILVIITVIA TLAMQDFMEA AAVVFLFTIS DWLETRASYK ATSVMQSLMS
0201: LAPQKAIIAE TGEEVEVDEV KVDTVVAVKA GETIPIDGIV VDGNCEVDEK TLTGEAFPVP KQRDSTVWAG TINLNGYICV KTTSLAGDCV VAKMAKLVEE
0301: AQSSKTKSQR LIDKCSQYYT PAIILVSACV AIVPVIMKVH NLKHWFHLAL VVLVSGCPCG LILSTPVATF CALTKAATSG LLIKSADYLD TLSKIKIVAF
0401: DKTGTITRGE FIVIDFKSLS RDINLRSLLY WVSSVESKSS HPMAATIVDY AKSVSVEPRP EEVEDYQNFP GEGIYGKIDG NDIFIGNKKI ASRAGCSTVP
0501: EIEVDTKGGK TVGYVYVGER LAGFFNLSDA CRSGVSQAMA ELKSLGIKTA MLTGDNQAAA MHAQEQLGNV LDVVHGDLLP EDKSRIIQEF KKEGPTAMVG
0601: DGVNDAPALA TADIGISMGI SGSALATQTG NIILMSNDIR RIPQAVKLAR RARRKVVENV CLSIILKAGI LALAFAGHPL IWAAVLVDVG TCLLVIFNSM
0701: LLLREKKKIG NKKCYRASTS KLNGRKLEGD DDYVVDLEAG LLTKSGNGQC KSSCCGDKKN QENVVMMKPS SKTSSDHSHP GCCGDKKEEK VKPLVKDGCC
0801: SEKTRKSEGD MVSLSSCKKS SHVKHDLKMK GGSGCCASKN EKGKEVVAKS CCEKPKQQVE SVGDCKSGHC EKKKQAEDIV VPVQIIGHAL THVEIELQTK
0901: ETCKTSCCDS KEKVKETGLL LSSENTPYLE KGVLIKDEGN CKSGSENMGT VKQSCHEKGC SDEKQTGEIT LASEEETDDQ DCSSGCCVNE GTVKQSFDEK
1001: KHSVLVEKEG LDMETGFCCD AKLVCCGNTE GEVKEQCRLE IKKEEHCKSG CCGEEIQTGE ITLVSEEETE STNCSTGCCV DKEEVTQTCH EKPASLVVSG
1101: LEVKKDEHCE SSHRAVKVET CCKVKIPEAC ASKCRDRAKR HSGKSCCRSY AKELCSHRHH HHHHHHHHHV SA

Arabidopsis Description

HMA4Putative cadmium/zinc-transporting ATPase HMA4 [Source:UniProtKB/Swiss-Prot;Acc:O64474]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.